Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RNF41Q9H4P4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RNF41Q9H4P4 RNU6-222P-201ENST00000362438 107 ntBASIC1.55□□□□□ -2.16
RNF41Q9H4P4 RNU6-1188P-201ENST00000363795 107 ntBASIC1.55□□□□□ -2.16
RNF41Q9H4P4 RNU6-296P-201ENST00000384608 107 ntBASIC1.55□□□□□ -2.16
RNF41Q9H4P4 MIR548B-201ENST00000385247 97 ntBASIC1.55□□□□□ -2.16
RNF41Q9H4P4 MIR320B2-201ENST00000408479 138 ntBASIC1.55□□□□□ -2.16
RNF41Q9H4P4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.55□□□□□ -2.16
RNF41Q9H4P4 AC016909.1-201ENST00000415916 166 ntBASIC1.55□□□□□ -2.16
RNF41Q9H4P4 EIF1P2-201ENST00000428233 350 ntBASIC1.55□□□□□ -2.16
RNF41Q9H4P4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.55□□□□□ -2.16
RNF41Q9H4P4 RNU7-57P-201ENST00000459540 60 ntBASIC1.55□□□□□ -2.16
RNF41Q9H4P4 MIR4801-201ENST00000582704 82 ntBASIC1.55□□□□□ -2.16
RNF41Q9H4P4 MIR3660-201ENST00000584845 100 ntBASIC1.55□□□□□ -2.16
RNF41Q9H4P4 7SK.7-201ENST00000603504 247 ntBASIC1.55□□□□□ -2.16
RNF41Q9H4P4 MZT1P2-201ENST00000604387 248 ntBASIC1.55□□□□□ -2.16
RNF41Q9H4P4 RBM11P1-201ENST00000604951 799 ntBASIC1.55□□□□□ -2.16
RNF41Q9H4P4 AC103810.8-201ENST00000607347 118 ntBASIC1.55□□□□□ -2.16
RNF41Q9H4P4 AC100812.1-201ENST00000607622 580 ntBASIC1.55□□□□□ -2.16
RNF41Q9H4P4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.55□□□□□ -2.16
RNF41Q9H4P4 AC083806.3-201ENST00000614016 455 ntBASIC1.55□□□□□ -2.16
RNF41Q9H4P4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.55□□□□□ -2.16
RNF41Q9H4P4 AC068205.3-201ENST00000636385 468 ntBASIC1.55□□□□□ -2.16
RNF41Q9H4P4 AL669831.3-213ENST00000636676 183 ntBASIC1.55□□□□□ -2.16
RNF41Q9H4P4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.55□□□□□ -2.16
RNF41Q9H4P4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
RNF41Q9H4P4 RNU6-862P-201ENST00000362804 105 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 Y_RNA.142-201ENST00000363491 102 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 RNU6-112P-201ENST00000363599 104 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 SNORD87-201ENST00000364849 89 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 RNY3P14-201ENST00000384309 102 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 RNU6-310P-201ENST00000384655 107 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 RNU6-541P-201ENST00000384709 110 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 AL033519.2-201ENST00000403958 392 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 Y_RNA.646-201ENST00000410980 101 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 NCOR1P3-201ENST00000420479 303 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.54□□□□□ -2.16
RNF41Q9H4P4 NDUFB4P10-201ENST00000452541 359 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 Y_RNA.635-201ENST00000459041 101 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 U8.22-201ENST00000459141 133 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 AC004223.1-201ENST00000479840 271 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 AC011406.1-201ENST00000512440 370 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 AC093303.1-201ENST00000514549 295 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 RNU6-120P-201ENST00000516077 103 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 RNU6-1041P-201ENST00000516254 102 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.54□□□□□ -2.16
RNF41Q9H4P4 SNORD11B-201ENST00000607707 90 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 AL353149.1-201ENST00000610667 244 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 MIR338-201ENST00000636369 67 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 MTND5P16-201ENST00000460269 1703 ntBASIC1.54□□□□□ -2.16
RNF41Q9H4P4 RNU6-280P-201ENST00000364145 104 ntBASIC1.53□□□□□ -2.16
RNF41Q9H4P4 Y_RNA.415-201ENST00000384012 112 ntBASIC1.53□□□□□ -2.16
RNF41Q9H4P4 Y_RNA.557-201ENST00000384680 107 ntBASIC1.53□□□□□ -2.16
RNF41Q9H4P4 SNORA40.6-201ENST00000391153 128 ntBASIC1.53□□□□□ -2.16
RNF41Q9H4P4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.53□□□□□ -2.16
RNF41Q9H4P4 Y_RNA.595-201ENST00000410403 105 ntBASIC1.53□□□□□ -2.16
RNF41Q9H4P4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.53□□□□□ -2.16
RNF41Q9H4P4 AL353997.1-201ENST00000432936 108 ntBASIC1.53□□□□□ -2.16
RNF41Q9H4P4 AC245047.4-201ENST00000433189 144 ntBASIC1.53□□□□□ -2.16
RNF41Q9H4P4 HSPE1P24-201ENST00000450782 238 ntBASIC1.53□□□□□ -2.16
RNF41Q9H4P4 ATP5J2P3-201ENST00000451550 258 ntBASIC1.53□□□□□ -2.16
RNF41Q9H4P4 RNA5SP57-201ENST00000459463 123 ntBASIC1.53□□□□□ -2.16
RNF41Q9H4P4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.53□□□□□ -2.16
RNF41Q9H4P4 RNU6-1114P-201ENST00000516022 107 ntBASIC1.53□□□□□ -2.16
RNF41Q9H4P4 Y_RNA.706-201ENST00000516933 99 ntBASIC1.53□□□□□ -2.16
RNF41Q9H4P4 RNU1-117P-201ENST00000517041 158 ntBASIC1.53□□□□□ -2.16
RNF41Q9H4P4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.53□□□□□ -2.16
RNF41Q9H4P4 AC005730.3-201ENST00000583067 366 ntBASIC1.53□□□□□ -2.16
RNF41Q9H4P4 AC125232.2-201ENST00000592457 143 ntBASIC1.53□□□□□ -2.16
RNF41Q9H4P4 AL353770.2-201ENST00000620024 78 ntBASIC1.53□□□□□ -2.16
RNF41Q9H4P4 RNU6-727P-201ENST00000363592 107 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 Y_RNA.364-201ENST00000365532 101 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 RNU6-793P-201ENST00000384233 104 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 MIR329-1-201ENST00000385028 80 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 MIR1185-2-201ENST00000408687 86 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 RNU6-370P-201ENST00000411008 104 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 RNU6-1304P-201ENST00000411374 106 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 AC004965.1-201ENST00000413033 213 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 MTCYBP10-201ENST00000424905 650 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 MTND4P18-201ENST00000447010 465 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 RNU6-221P-201ENST00000459541 99 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 AC114982.1-201ENST00000469402 321 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 AC027575.1-201ENST00000481064 460 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 AL163540.1-201ENST00000485382 386 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 RPL17P19-201ENST00000489069 552 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 FGF7P4-201ENST00000509595 295 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 RNU6-970P-201ENST00000516312 107 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 RNU6-875P-201ENST00000516488 106 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 AC025647.1-201ENST00000517879 253 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 SUMO2P18-201ENST00000518873 252 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.52□□□□□ -2.17
RNF41Q9H4P4 MIR5094-201ENST00000578766 85 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 MIR4713-201ENST00000582691 75 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 AC005899.2-201ENST00000584353 90 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 AC113139.1-201ENST00000605049 239 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 AL132765.2-201ENST00000610812 351 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 PISRT1.1-201ENST00000616930 107 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms