Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AL137792.2-201ENST00000443484 235 ntBASIC2.17□□□□□ -2.06
USP44Q9H0E7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.17□□□□□ -2.06
USP44Q9H0E7 RPS27P21-201ENST00000486977 252 ntBASIC2.17□□□□□ -2.06
USP44Q9H0E7 AC108210.2-201ENST00000503681 201 ntBASIC2.17□□□□□ -2.06
USP44Q9H0E7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.17□□□□□ -2.06
USP44Q9H0E7 RNU6-976P-201ENST00000516086 111 ntBASIC2.17□□□□□ -2.06
USP44Q9H0E7 AC010999.1-201ENST00000611856 324 ntBASIC2.17□□□□□ -2.06
USP44Q9H0E7 AL078596.1-201ENST00000624856 447 ntBASIC2.17□□□□□ -2.06
USP44Q9H0E7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
USP44Q9H0E7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
USP44Q9H0E7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
USP44Q9H0E7 RNU6-545P-201ENST00000362681 104 ntBASIC2.16□□□□□ -2.06
USP44Q9H0E7 SNORD115-3-201ENST00000363100 82 ntBASIC2.16□□□□□ -2.06
USP44Q9H0E7 Y_RNA.138-201ENST00000363462 102 ntBASIC2.16□□□□□ -2.06
USP44Q9H0E7 U3.8-201ENST00000363675 217 ntBASIC2.16□□□□□ -2.06
USP44Q9H0E7 Y_RNA.252-201ENST00000364556 101 ntBASIC2.16□□□□□ -2.06
USP44Q9H0E7 Y_RNA.428-201ENST00000384078 102 ntBASIC2.16□□□□□ -2.06
USP44Q9H0E7 RNU6-281P-201ENST00000384212 103 ntBASIC2.16□□□□□ -2.06
USP44Q9H0E7 SNORA67.2-201ENST00000384300 149 ntBASIC2.16□□□□□ -2.06
USP44Q9H0E7 AL158823.1-201ENST00000418441 478 ntBASIC2.16□□□□□ -2.06
USP44Q9H0E7 AC099799.1-201ENST00000439809 192 ntBASIC2.16□□□□□ -2.06
USP44Q9H0E7 CHEK2P4-201ENST00000450340 246 ntBASIC2.16□□□□□ -2.06
USP44Q9H0E7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.16□□□□□ -2.06
USP44Q9H0E7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
USP44Q9H0E7 RNU6-856P-201ENST00000516959 98 ntBASIC2.16□□□□□ -2.06
USP44Q9H0E7 SNORD116.3-201ENST00000517176 78 ntBASIC2.16□□□□□ -2.06
USP44Q9H0E7 MIR3169-201ENST00000578032 83 ntBASIC2.16□□□□□ -2.06
USP44Q9H0E7 MIR5695-201ENST00000579717 85 ntBASIC2.16□□□□□ -2.06
USP44Q9H0E7 MIR4769-201ENST00000584126 77 ntBASIC2.16□□□□□ -2.06
USP44Q9H0E7 AC005034.5-201ENST00000604219 466 ntBASIC2.16□□□□□ -2.06
USP44Q9H0E7 AC005296.1-201ENST00000616145 209 ntBASIC2.16□□□□□ -2.06
USP44Q9H0E7 AC138305.3-201ENST00000624988 240 ntBASIC2.16□□□□□ -2.06
USP44Q9H0E7 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.16□□□□□ -2.06
USP44Q9H0E7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
USP44Q9H0E7 Y_RNA.112-201ENST00000363250 102 ntBASIC2.15□□□□□ -2.07
USP44Q9H0E7 RNU4-52P-201ENST00000384209 138 ntBASIC2.15□□□□□ -2.07
USP44Q9H0E7 RNU6-474P-201ENST00000384243 107 ntBASIC2.15□□□□□ -2.07
USP44Q9H0E7 SNORA69.1-201ENST00000390904 137 ntBASIC2.15□□□□□ -2.07
USP44Q9H0E7 RNA5SP212-201ENST00000391223 107 ntBASIC2.15□□□□□ -2.07
USP44Q9H0E7 Y_RNA.592-201ENST00000410274 109 ntBASIC2.15□□□□□ -2.07
USP44Q9H0E7 BX510359.4-201ENST00000423750 193 ntBASIC2.15□□□□□ -2.07
USP44Q9H0E7 AC139712.2-201ENST00000424302 339 ntBASIC2.15□□□□□ -2.07
USP44Q9H0E7 AC096644.2-201ENST00000429278 159 ntBASIC2.15□□□□□ -2.07
USP44Q9H0E7 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.15□□□□□ -2.07
USP44Q9H0E7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.15□□□□□ -2.07
USP44Q9H0E7 RNA5SP233-201ENST00000459153 113 ntBASIC2.15□□□□□ -2.07
USP44Q9H0E7 RNU7-169P-201ENST00000459456 61 ntBASIC2.15□□□□□ -2.07
USP44Q9H0E7 HMGN2P9-201ENST00000476875 229 ntBASIC2.15□□□□□ -2.07
USP44Q9H0E7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.15□□□□□ -2.07
USP44Q9H0E7 Y_RNA.661-201ENST00000516003 99 ntBASIC2.15□□□□□ -2.07
USP44Q9H0E7 Y_RNA.701-201ENST00000516812 110 ntBASIC2.15□□□□□ -2.07
USP44Q9H0E7 AC144568.1-201ENST00000520139 137 ntBASIC2.15□□□□□ -2.07
USP44Q9H0E7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.15□□□□□ -2.07
USP44Q9H0E7 AC125232.2-201ENST00000592457 143 ntBASIC2.15□□□□□ -2.07
USP44Q9H0E7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.15□□□□□ -2.07
USP44Q9H0E7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.15□□□□□ -2.07
USP44Q9H0E7 Y_RNA.31-201ENST00000362574 102 ntBASIC2.14□□□□□ -2.07
USP44Q9H0E7 RNU6-1305P-201ENST00000364353 104 ntBASIC2.14□□□□□ -2.07
USP44Q9H0E7 RNU4-42P-201ENST00000364738 142 ntBASIC2.14□□□□□ -2.07
USP44Q9H0E7 RNU6-308P-201ENST00000390957 107 ntBASIC2.14□□□□□ -2.07
USP44Q9H0E7 AC010531.2-201ENST00000465012 153 ntBASIC2.14□□□□□ -2.07
USP44Q9H0E7 RN7SL274P-201ENST00000492268 272 ntBASIC2.14□□□□□ -2.07
USP44Q9H0E7 RNU6-1146P-201ENST00000516282 102 ntBASIC2.14□□□□□ -2.07
USP44Q9H0E7 Y_RNA.683-201ENST00000516508 93 ntBASIC2.14□□□□□ -2.07
USP44Q9H0E7 SUMO2P18-201ENST00000518873 252 ntBASIC2.14□□□□□ -2.07
USP44Q9H0E7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.14□□□□□ -2.07
USP44Q9H0E7 MIR4448-201ENST00000584360 86 ntBASIC2.14□□□□□ -2.07
USP44Q9H0E7 AL109918.3-201ENST00000603072 338 ntBASIC2.14□□□□□ -2.07
USP44Q9H0E7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.14□□□□□ -2.07
USP44Q9H0E7 AC022140.2-201ENST00000623500 188 ntBASIC2.14□□□□□ -2.07
USP44Q9H0E7 MIR340-201ENST00000362125 95 ntBASIC2.13□□□□□ -2.07
USP44Q9H0E7 SNORD114-6-201ENST00000364393 72 ntBASIC2.13□□□□□ -2.07
USP44Q9H0E7 SNORA16B-201ENST00000364674 135 ntBASIC2.13□□□□□ -2.07
USP44Q9H0E7 Y_RNA.445-201ENST00000384168 102 ntBASIC2.13□□□□□ -2.07
USP44Q9H0E7 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.13□□□□□ -2.07
USP44Q9H0E7 RNA5SP504-201ENST00000410676 117 ntBASIC2.13□□□□□ -2.07
USP44Q9H0E7 AL354751.2-201ENST00000415471 210 ntBASIC2.13□□□□□ -2.07
USP44Q9H0E7 AC114482.1-201ENST00000418010 247 ntBASIC2.13□□□□□ -2.07
USP44Q9H0E7 AC008134.1-201ENST00000420943 193 ntBASIC2.13□□□□□ -2.07
USP44Q9H0E7 MTCO2P12-201ENST00000427426 682 ntBASIC2.13□□□□□ -2.07
USP44Q9H0E7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.13□□□□□ -2.07
USP44Q9H0E7 AC091179.3-201ENST00000474761 144 ntBASIC2.13□□□□□ -2.07
USP44Q9H0E7 RNU6-1153P-201ENST00000516760 105 ntBASIC2.13□□□□□ -2.07
USP44Q9H0E7 RNU6-548P-201ENST00000517083 115 ntBASIC2.13□□□□□ -2.07
USP44Q9H0E7 AC022868.1-201ENST00000517767 391 ntBASIC2.13□□□□□ -2.07
USP44Q9H0E7 CBX3P4-201ENST00000538909 354 ntBASIC2.13□□□□□ -2.07
USP44Q9H0E7 AC093023.1-201ENST00000547375 507 ntBASIC2.13□□□□□ -2.07
USP44Q9H0E7 MIR3684-201ENST00000579779 74 ntBASIC2.13□□□□□ -2.07
USP44Q9H0E7 AC092447.9-201ENST00000603395 144 ntBASIC2.13□□□□□ -2.07
USP44Q9H0E7 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.13□□□□□ -2.07
USP44Q9H0E7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
USP44Q9H0E7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.12□□□□□ -2.07
USP44Q9H0E7 RNA5SP361-201ENST00000362686 118 ntBASIC2.12□□□□□ -2.07
USP44Q9H0E7 RNU1-17P-201ENST00000363022 152 ntBASIC2.12□□□□□ -2.07
USP44Q9H0E7 RNY1P14-201ENST00000384426 108 ntBASIC2.12□□□□□ -2.07
USP44Q9H0E7 MIR17-201ENST00000385012 84 ntBASIC2.12□□□□□ -2.07
USP44Q9H0E7 SNORA48.1-201ENST00000390879 135 ntBASIC2.12□□□□□ -2.07
USP44Q9H0E7 RNU6-482P-201ENST00000391068 107 ntBASIC2.12□□□□□ -2.07
USP44Q9H0E7 Y_RNA.595-201ENST00000410403 105 ntBASIC2.12□□□□□ -2.07
USP44Q9H0E7 Y_RNA.605-201ENST00000410577 105 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms