Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 SNORA7.1-201ENST00000363750 139 ntBASIC0.81□□□□□ -2.28
SLIRPQ9GZT3 RNU6-457P-201ENST00000363999 107 ntBASIC0.81□□□□□ -2.28
SLIRPQ9GZT3 Y_RNA.256-201ENST00000364594 104 ntBASIC0.81□□□□□ -2.28
SLIRPQ9GZT3 MIR19B1-201ENST00000384829 87 ntBASIC0.81□□□□□ -2.28
SLIRPQ9GZT3 RNU6-780P-201ENST00000391030 104 ntBASIC0.81□□□□□ -2.28
SLIRPQ9GZT3 RNU6-1054P-201ENST00000411293 104 ntBASIC0.81□□□□□ -2.28
SLIRPQ9GZT3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.81□□□□□ -2.28
SLIRPQ9GZT3 AC098826.2-201ENST00000452011 651 ntBASIC0.81□□□□□ -2.28
SLIRPQ9GZT3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.81□□□□□ -2.28
SLIRPQ9GZT3 AC093303.1-201ENST00000514549 295 ntBASIC0.81□□□□□ -2.28
SLIRPQ9GZT3 SNORA70.22-201ENST00000517160 124 ntBASIC0.81□□□□□ -2.28
SLIRPQ9GZT3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.81□□□□□ -2.28
SLIRPQ9GZT3 MIR3945-201ENST00000581853 98 ntBASIC0.81□□□□□ -2.28
SLIRPQ9GZT3 AC022079.1-201ENST00000621546 602 ntBASIC0.81□□□□□ -2.28
SLIRPQ9GZT3 AC006435.5-201ENST00000624486 112 ntBASIC0.81□□□□□ -2.28
SLIRPQ9GZT3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.81□□□□□ -2.28
SLIRPQ9GZT3 AC068137.4-201ENST00000638485 296 ntBASIC0.81□□□□□ -2.28
SLIRPQ9GZT3 AC018630.2-201ENST00000534866 2403 ntBASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 RNU1-17P-201ENST00000363022 152 ntBASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 Y_RNA.100-201ENST00000363141 102 ntBASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 RNU4-76P-201ENST00000364509 141 ntBASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 RNU6-541P-201ENST00000384709 110 ntBASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 MIR653-201ENST00000385279 96 ntBASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 AL445305.1-201ENST00000432577 575 ntBASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 MTND4P18-201ENST00000447010 465 ntBASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 SNORD65B-201ENST00000459126 73 ntBASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 RNU6-256P-201ENST00000516747 97 ntBASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 Y_RNA.704-201ENST00000516851 102 ntBASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 UBL5P4-201ENST00000562584 236 ntBASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 MIR3672-201ENST00000584290 82 ntBASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 NBR2-204ENST00000587322 63 ntBASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 AC092954.2-201ENST00000609103 430 ntBASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 GHRLOS.1-201ENST00000610995 70 ntBASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 AC012676.2-201ENST00000619258 186 ntBASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 AL353770.2-201ENST00000620024 78 ntBASIC0.8□□□□□ -2.28
SLIRPQ9GZT3 Y_RNA.51-201ENST00000362725 102 ntBASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 RNU6-451P-201ENST00000362921 107 ntBASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 RNY3P3-201ENST00000363816 102 ntBASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 Y_RNA.179-201ENST00000363844 90 ntBASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 SNORD116-1-201ENST00000384335 95 ntBASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 RPL30P16-201ENST00000419341 429 ntBASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 AC243428.1-201ENST00000421099 264 ntBASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 AC010095.1-201ENST00000443543 144 ntBASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 MRPS10P1-201ENST00000448483 130 ntBASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 UBL5P1-201ENST00000507979 193 ntBASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 SNORA31.2-201ENST00000516019 134 ntBASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 SNORA31.4-201ENST00000516049 129 ntBASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 RN7SKP49-201ENST00000516675 260 ntBASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 RNU6-922P-201ENST00000516753 99 ntBASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 APOOP3-201ENST00000536787 586 ntBASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 MIR4438-201ENST00000585271 93 ntBASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 AC124303.1-201ENST00000605703 360 ntBASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 AC019193.3-201ENST00000609144 554 ntBASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 AC106754.2-201ENST00000623006 233 ntBASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.79□□□□□ -2.28
SLIRPQ9GZT3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
SLIRPQ9GZT3 RNU4-79P-201ENST00000362764 141 ntBASIC0.78□□□□□ -2.28
SLIRPQ9GZT3 Y_RNA.212-201ENST00000364177 102 ntBASIC0.78□□□□□ -2.28
SLIRPQ9GZT3 MIR222-201ENST00000384992 110 ntBASIC0.78□□□□□ -2.28
SLIRPQ9GZT3 MIR10B-201ENST00000385011 110 ntBASIC0.78□□□□□ -2.28
SLIRPQ9GZT3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.78□□□□□ -2.28
SLIRPQ9GZT3 RNU2-16P-201ENST00000410712 136 ntBASIC0.78□□□□□ -2.28
SLIRPQ9GZT3 AC105758.1-201ENST00000506038 399 ntBASIC0.78□□□□□ -2.28
SLIRPQ9GZT3 AC134698.4-201ENST00000523451 826 ntBASIC0.78□□□□□ -2.28
SLIRPQ9GZT3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.78□□□□□ -2.28
SLIRPQ9GZT3 AP000889.1-201ENST00000530968 660 ntBASIC0.78□□□□□ -2.28
SLIRPQ9GZT3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
SLIRPQ9GZT3 SNORA28-201ENST00000606769 126 ntBASIC0.78□□□□□ -2.28
SLIRPQ9GZT3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.78□□□□□ -2.28
SLIRPQ9GZT3 MIR1321-201ENST00000637766 79 ntBASIC0.78□□□□□ -2.28
SLIRPQ9GZT3 RNU6-199P-201ENST00000362954 107 ntBASIC0.77□□□□□ -2.29
SLIRPQ9GZT3 Y_RNA.184-201ENST00000363884 108 ntBASIC0.77□□□□□ -2.29
SLIRPQ9GZT3 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
SLIRPQ9GZT3 RNU6-596P-201ENST00000365395 98 ntBASIC0.77□□□□□ -2.29
SLIRPQ9GZT3 SNORD41-201ENST00000386967 70 ntBASIC0.77□□□□□ -2.29
SLIRPQ9GZT3 RNU6-910P-201ENST00000390844 107 ntBASIC0.77□□□□□ -2.29
SLIRPQ9GZT3 SNORD12-201ENST00000391002 90 ntBASIC0.77□□□□□ -2.29
SLIRPQ9GZT3 AC245047.7-201ENST00000440265 293 ntBASIC0.77□□□□□ -2.29
SLIRPQ9GZT3 MTND1P1-201ENST00000445453 368 ntBASIC0.77□□□□□ -2.29
SLIRPQ9GZT3 MTND1P29-201ENST00000448112 647 ntBASIC0.77□□□□□ -2.29
SLIRPQ9GZT3 RNU7-95P-201ENST00000459222 64 ntBASIC0.77□□□□□ -2.29
SLIRPQ9GZT3 AP000870.1-201ENST00000472927 406 ntBASIC0.77□□□□□ -2.29
SLIRPQ9GZT3 AC048334.1-201ENST00000477975 159 ntBASIC0.77□□□□□ -2.29
SLIRPQ9GZT3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.77□□□□□ -2.29
SLIRPQ9GZT3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.77□□□□□ -2.29
SLIRPQ9GZT3 AC010598.1-201ENST00000510378 103 ntBASIC0.77□□□□□ -2.29
SLIRPQ9GZT3 AC091144.1-201ENST00000519573 138 ntBASIC0.77□□□□□ -2.29
SLIRPQ9GZT3 AC090049.2-201ENST00000550377 109 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 163.1 ms