Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 RNA5SP54-201ENST00000516951 92 ntBASIC0.35□□□□□ -2.35
NKX6-2Q9C056 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.35□□□□□ -2.35
NKX6-2Q9C056 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.35□□□□□ -2.35
NKX6-2Q9C056 AL118558.2-201ENST00000556294 238 ntBASIC0.35□□□□□ -2.35
NKX6-2Q9C056 MIR3192-201ENST00000584920 77 ntBASIC0.35□□□□□ -2.35
NKX6-2Q9C056 MIR4424-201ENST00000585257 86 ntBASIC0.35□□□□□ -2.35
NKX6-2Q9C056 AL360219.1-201ENST00000610230 366 ntBASIC0.35□□□□□ -2.35
NKX6-2Q9C056 AC242852.1-201ENST00000612151 96 ntBASIC0.35□□□□□ -2.35
NKX6-2Q9C056 AC072046.2-201ENST00000618366 268 ntBASIC0.35□□□□□ -2.35
NKX6-2Q9C056 AC103705.1-201ENST00000619013 241 ntBASIC0.35□□□□□ -2.35
NKX6-2Q9C056 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.35□□□□□ -2.35
NKX6-2Q9C056 MTND4P12-201ENST00000498999 1377 ntBASIC0.34□□□□□ -2.35
NKX6-2Q9C056 RNU6-873P-201ENST00000363833 107 ntBASIC0.34□□□□□ -2.36
NKX6-2Q9C056 Y_RNA.267-201ENST00000364679 109 ntBASIC0.34□□□□□ -2.36
NKX6-2Q9C056 SNORA50A-201ENST00000384225 134 ntBASIC0.34□□□□□ -2.36
NKX6-2Q9C056 MIR32-201ENST00000384965 70 ntBASIC0.34□□□□□ -2.36
NKX6-2Q9C056 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
NKX6-2Q9C056 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.34□□□□□ -2.36
NKX6-2Q9C056 AC114737.2-201ENST00000421583 173 ntBASIC0.34□□□□□ -2.36
NKX6-2Q9C056 Z82188.1-201ENST00000436709 154 ntBASIC0.34□□□□□ -2.36
NKX6-2Q9C056 AL359672.1-201ENST00000442302 409 ntBASIC0.34□□□□□ -2.36
NKX6-2Q9C056 AC010469.2-201ENST00000496412 480 ntBASIC0.34□□□□□ -2.36
NKX6-2Q9C056 AC092436.3-201ENST00000511788 257 ntBASIC0.34□□□□□ -2.36
NKX6-2Q9C056 AC022868.1-201ENST00000517767 391 ntBASIC0.34□□□□□ -2.36
NKX6-2Q9C056 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.34□□□□□ -2.36
NKX6-2Q9C056 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.34□□□□□ -2.36
NKX6-2Q9C056 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.34□□□□□ -2.36
NKX6-2Q9C056 FAM106DP-201ENST00000586416 501 ntBASIC0.34□□□□□ -2.36
NKX6-2Q9C056 AC244015.1-201ENST00000622301 99 ntBASIC0.34□□□□□ -2.36
NKX6-2Q9C056 Y_RNA.319-201ENST00000365138 92 ntBASIC0.33□□□□□ -2.36
NKX6-2Q9C056 Y_RNA.378-201ENST00000365652 113 ntBASIC0.33□□□□□ -2.36
NKX6-2Q9C056 RNU6-17P-201ENST00000384245 107 ntBASIC0.33□□□□□ -2.36
NKX6-2Q9C056 RNU6-18P-201ENST00000384527 107 ntBASIC0.33□□□□□ -2.36
NKX6-2Q9C056 RNY3P9-201ENST00000384727 106 ntBASIC0.33□□□□□ -2.36
NKX6-2Q9C056 MIR526A1-201ENST00000384897 85 ntBASIC0.33□□□□□ -2.36
NKX6-2Q9C056 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.33□□□□□ -2.36
NKX6-2Q9C056 MTCO2P16-201ENST00000436962 677 ntBASIC0.33□□□□□ -2.36
NKX6-2Q9C056 AL031667.1-201ENST00000440222 725 ntBASIC0.33□□□□□ -2.36
NKX6-2Q9C056 NDUFB4P10-201ENST00000452541 359 ntBASIC0.33□□□□□ -2.36
NKX6-2Q9C056 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.33□□□□□ -2.36
NKX6-2Q9C056 SNORD65B-201ENST00000459126 73 ntBASIC0.33□□□□□ -2.36
NKX6-2Q9C056 AC091021.1-201ENST00000468051 388 ntBASIC0.33□□□□□ -2.36
NKX6-2Q9C056 AC091179.3-201ENST00000474761 144 ntBASIC0.33□□□□□ -2.36
NKX6-2Q9C056 HMGN1P7-201ENST00000491722 313 ntBASIC0.33□□□□□ -2.36
NKX6-2Q9C056 MTCO1P29-201ENST00000496868 288 ntBASIC0.33□□□□□ -2.36
NKX6-2Q9C056 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.33□□□□□ -2.36
NKX6-2Q9C056 AC097462.1-201ENST00000514125 324 ntBASIC0.33□□□□□ -2.36
NKX6-2Q9C056 DEFB108E-201ENST00000524692 240 ntBASIC0.33□□□□□ -2.36
NKX6-2Q9C056 AC131055.1-201ENST00000584626 316 ntBASIC0.33□□□□□ -2.36
NKX6-2Q9C056 snoU13.31-201ENST00000607291 104 ntBASIC0.33□□□□□ -2.36
NKX6-2Q9C056 AL136370.1-201ENST00000608166 691 ntBASIC0.33□□□□□ -2.36
NKX6-2Q9C056 MIR103A2-201ENST00000362154 78 ntBASIC0.32□□□□□ -2.36
NKX6-2Q9C056 SNORA1B-201ENST00000362535 133 ntBASIC0.32□□□□□ -2.36
NKX6-2Q9C056 SNORD115-8-201ENST00000363856 82 ntBASIC0.32□□□□□ -2.36
NKX6-2Q9C056 SNORD115-38-201ENST00000365037 82 ntBASIC0.32□□□□□ -2.36
NKX6-2Q9C056 RNU6-1158P-201ENST00000391167 107 ntBASIC0.32□□□□□ -2.36
NKX6-2Q9C056 AL590002.1-201ENST00000406554 418 ntBASIC0.32□□□□□ -2.36
NKX6-2Q9C056 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.32□□□□□ -2.36
NKX6-2Q9C056 AC109810.1-201ENST00000534066 224 ntBASIC0.32□□□□□ -2.36
NKX6-2Q9C056 AC016957.1-201ENST00000534895 309 ntBASIC0.32□□□□□ -2.36
NKX6-2Q9C056 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.32□□□□□ -2.36
NKX6-2Q9C056 MTND1P15-201ENST00000579262 949 ntBASIC0.32□□□□□ -2.36
NKX6-2Q9C056 CPDP1-201ENST00000579660 283 ntBASIC0.32□□□□□ -2.36
NKX6-2Q9C056 AC040904.1-201ENST00000590850 223 ntBASIC0.32□□□□□ -2.36
NKX6-2Q9C056 AC016727.1-205ENST00000605437 569 ntBASIC0.32□□□□□ -2.36
NKX6-2Q9C056 AL050303.3-201ENST00000613704 284 ntBASIC0.32□□□□□ -2.36
NKX6-2Q9C056 MIR6767-201ENST00000637302 66 ntBASIC0.32□□□□□ -2.36
NKX6-2Q9C056 AC134026.1-201ENST00000623249 2239 ntBASIC0.32□□□□□ -2.36
NKX6-2Q9C056 ELL2P3-201ENST00000457883 1602 ntBASIC0.31□□□□□ -2.36
NKX6-2Q9C056 Z82205.1-201ENST00000428456 297 ntBASIC0.31□□□□□ -2.36
NKX6-2Q9C056 AL162725.1-201ENST00000435405 301 ntBASIC0.31□□□□□ -2.36
NKX6-2Q9C056 DAP3P1-201ENST00000441522 278 ntBASIC0.31□□□□□ -2.36
NKX6-2Q9C056 MTND4P18-201ENST00000447010 465 ntBASIC0.31□□□□□ -2.36
NKX6-2Q9C056 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.31□□□□□ -2.36
NKX6-2Q9C056 RNU6-1291P-201ENST00000516591 104 ntBASIC0.31□□□□□ -2.36
NKX6-2Q9C056 RNU6-1332P-201ENST00000516666 104 ntBASIC0.31□□□□□ -2.36
NKX6-2Q9C056 RNU7-172P-201ENST00000517125 64 ntBASIC0.31□□□□□ -2.36
NKX6-2Q9C056 RNU6-1116P-201ENST00000517269 99 ntBASIC0.31□□□□□ -2.36
NKX6-2Q9C056 AC011604.1-201ENST00000545978 196 ntBASIC0.31□□□□□ -2.36
NKX6-2Q9C056 AC018659.1-201ENST00000551083 169 ntBASIC0.31□□□□□ -2.36
NKX6-2Q9C056 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.31□□□□□ -2.36
NKX6-2Q9C056 AL359821.1-201ENST00000605519 182 ntBASIC0.31□□□□□ -2.36
NKX6-2Q9C056 RNU6-94P-201ENST00000607728 107 ntBASIC0.31□□□□□ -2.36
NKX6-2Q9C056 AC005609.4-201ENST00000625071 447 ntBASIC0.31□□□□□ -2.36
NKX6-2Q9C056 MIRLET7C-201ENST00000362160 84 ntBASIC0.3□□□□□ -2.36
NKX6-2Q9C056 RNA5SP347-201ENST00000362445 119 ntBASIC0.3□□□□□ -2.36
NKX6-2Q9C056 SNORD50.1-201ENST00000362987 71 ntBASIC0.3□□□□□ -2.36
NKX6-2Q9C056 RNA5SP264-201ENST00000363115 107 ntBASIC0.3□□□□□ -2.36
NKX6-2Q9C056 SNORA25.3-201ENST00000363205 127 ntBASIC0.3□□□□□ -2.36
NKX6-2Q9C056 RNU4-66P-201ENST00000365199 138 ntBASIC0.3□□□□□ -2.36
NKX6-2Q9C056 RNY1P8-201ENST00000383970 114 ntBASIC0.3□□□□□ -2.36
NKX6-2Q9C056 SNORA36.2-201ENST00000384004 127 ntBASIC0.3□□□□□ -2.36
NKX6-2Q9C056 RNU6-214P-201ENST00000384130 107 ntBASIC0.3□□□□□ -2.36
NKX6-2Q9C056 RNU6-1297P-201ENST00000384415 104 ntBASIC0.3□□□□□ -2.36
NKX6-2Q9C056 RNU6-1237P-201ENST00000384777 107 ntBASIC0.3□□□□□ -2.36
NKX6-2Q9C056 AL365203.2-201ENST00000423444 196 ntBASIC0.3□□□□□ -2.36
NKX6-2Q9C056 AC073464.1-201ENST00000429823 534 ntBASIC0.3□□□□□ -2.36
NKX6-2Q9C056 AC079354.2-201ENST00000453523 154 ntBASIC0.3□□□□□ -2.36
NKX6-2Q9C056 HMGN2P26-201ENST00000463169 339 ntBASIC0.3□□□□□ -2.36
NKX6-2Q9C056 MTCO2P4-201ENST00000517968 247 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms