Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.54□□□□□ -2.16
SSX3Q99909 AC099654.14-201ENST00000638599 341 ntBASIC1.54□□□□□ -2.16
SSX3Q99909 MTND5P35-201ENST00000557537 1720 ntBASIC1.54□□□□□ -2.16
SSX3Q99909 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SSX3Q99909 Y_RNA.364-201ENST00000365532 101 ntBASIC1.53□□□□□ -2.16
SSX3Q99909 MIR515-2-201ENST00000384883 83 ntBASIC1.53□□□□□ -2.16
SSX3Q99909 MIR515-1-201ENST00000384884 83 ntBASIC1.53□□□□□ -2.16
SSX3Q99909 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.53□□□□□ -2.16
SSX3Q99909 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SSX3Q99909 MIR1185-2-201ENST00000408687 86 ntBASIC1.53□□□□□ -2.16
SSX3Q99909 RNU2-20P-201ENST00000410425 191 ntBASIC1.53□□□□□ -2.16
SSX3Q99909 AC016909.1-201ENST00000415916 166 ntBASIC1.53□□□□□ -2.16
SSX3Q99909 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.53□□□□□ -2.16
SSX3Q99909 AC098614.3-201ENST00000438957 440 ntBASIC1.53□□□□□ -2.16
SSX3Q99909 HSPE1P9-201ENST00000440046 311 ntBASIC1.53□□□□□ -2.16
SSX3Q99909 RBMX2P4-201ENST00000441256 376 ntBASIC1.53□□□□□ -2.16
SSX3Q99909 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.53□□□□□ -2.16
SSX3Q99909 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.53□□□□□ -2.16
SSX3Q99909 AK6P2-201ENST00000549020 471 ntBASIC1.53□□□□□ -2.16
SSX3Q99909 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.53□□□□□ -2.16
SSX3Q99909 AC090617.3-201ENST00000573670 475 ntBASIC1.53□□□□□ -2.16
SSX3Q99909 AC092794.2-201ENST00000620933 563 ntBASIC1.53□□□□□ -2.16
SSX3Q99909 RNU6-1266P-201ENST00000362794 105 ntBASIC1.52□□□□□ -2.17
SSX3Q99909 Y_RNA.287-201ENST00000364853 94 ntBASIC1.52□□□□□ -2.17
SSX3Q99909 RNA5SP363-201ENST00000365072 115 ntBASIC1.52□□□□□ -2.17
SSX3Q99909 MIR764-201ENST00000390811 85 ntBASIC1.52□□□□□ -2.17
SSX3Q99909 RNA5SP323-201ENST00000391094 133 ntBASIC1.52□□□□□ -2.17
SSX3Q99909 SNORA26.9-201ENST00000391322 122 ntBASIC1.52□□□□□ -2.17
SSX3Q99909 RNU4-14P-201ENST00000410858 122 ntBASIC1.52□□□□□ -2.17
SSX3Q99909 AC138393.2-201ENST00000414742 246 ntBASIC1.52□□□□□ -2.17
SSX3Q99909 AC092423.1-201ENST00000430165 186 ntBASIC1.52□□□□□ -2.17
SSX3Q99909 RNU6-107P-201ENST00000516643 102 ntBASIC1.52□□□□□ -2.17
SSX3Q99909 RNA5SP481-201ENST00000516814 122 ntBASIC1.52□□□□□ -2.17
SSX3Q99909 RNA5SP437-201ENST00000517249 129 ntBASIC1.52□□□□□ -2.17
SSX3Q99909 AC016727.1-205ENST00000605437 569 ntBASIC1.52□□□□□ -2.17
SSX3Q99909 MIR6845-201ENST00000613182 61 ntBASIC1.52□□□□□ -2.17
SSX3Q99909 AL669831.3-213ENST00000636676 183 ntBASIC1.52□□□□□ -2.17
SSX3Q99909 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SSX3Q99909 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SSX3Q99909 WWP1P1-201ENST00000466609 2769 ntBASIC1.51□□□□□ -2.17
SSX3Q99909 SNORA33-201ENST00000363664 130 ntBASIC1.51□□□□□ -2.17
SSX3Q99909 RNU6-271P-201ENST00000363858 105 ntBASIC1.51□□□□□ -2.17
SSX3Q99909 SNORA63D-201ENST00000364359 132 ntBASIC1.51□□□□□ -2.17
SSX3Q99909 RNU6-360P-201ENST00000390944 104 ntBASIC1.51□□□□□ -2.17
SSX3Q99909 RNU6-370P-201ENST00000411008 104 ntBASIC1.51□□□□□ -2.17
SSX3Q99909 AC007677.1-201ENST00000445757 515 ntBASIC1.51□□□□□ -2.17
SSX3Q99909 UBE2V1P7-201ENST00000446395 340 ntBASIC1.51□□□□□ -2.17
SSX3Q99909 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.51□□□□□ -2.17
SSX3Q99909 RPL17P19-201ENST00000489069 552 ntBASIC1.51□□□□□ -2.17
SSX3Q99909 HMGN1P12-201ENST00000499125 195 ntBASIC1.51□□□□□ -2.17
SSX3Q99909 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.51□□□□□ -2.17
SSX3Q99909 SNORA20.3-201ENST00000516880 132 ntBASIC1.51□□□□□ -2.17
SSX3Q99909 RNU6-1213P-201ENST00000517075 94 ntBASIC1.51□□□□□ -2.17
SSX3Q99909 AC004584.2-201ENST00000570407 410 ntBASIC1.51□□□□□ -2.17
SSX3Q99909 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.51□□□□□ -2.17
SSX3Q99909 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.51□□□□□ -2.17
SSX3Q99909 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.51□□□□□ -2.17
SSX3Q99909 MIR8063-201ENST00000621930 81 ntBASIC1.51□□□□□ -2.17
SSX3Q99909 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.5□□□□□ -2.17
SSX3Q99909 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.5□□□□□ -2.17
SSX3Q99909 RNA5SP213-201ENST00000391031 106 ntBASIC1.5□□□□□ -2.17
SSX3Q99909 RNA5SP467-201ENST00000391274 118 ntBASIC1.5□□□□□ -2.17
SSX3Q99909 Y_RNA.595-201ENST00000410403 105 ntBASIC1.5□□□□□ -2.17
SSX3Q99909 RNU6-1001P-201ENST00000411265 100 ntBASIC1.5□□□□□ -2.17
SSX3Q99909 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.5□□□□□ -2.17
SSX3Q99909 EIF1P2-201ENST00000428233 350 ntBASIC1.5□□□□□ -2.17
SSX3Q99909 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.5□□□□□ -2.17
SSX3Q99909 MTND4P18-201ENST00000447010 465 ntBASIC1.5□□□□□ -2.17
SSX3Q99909 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.5□□□□□ -2.17
SSX3Q99909 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.5□□□□□ -2.17
SSX3Q99909 SNORA77B-201ENST00000578179 125 ntBASIC1.5□□□□□ -2.17
SSX3Q99909 MIR4422-201ENST00000581938 83 ntBASIC1.5□□□□□ -2.17
SSX3Q99909 MIR4769-201ENST00000584126 77 ntBASIC1.5□□□□□ -2.17
SSX3Q99909 AC100821.1-201ENST00000523153 2479 ntBASIC1.5□□□□□ -2.17
SSX3Q99909 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
SSX3Q99909 RNU6-874P-201ENST00000362390 105 ntBASIC1.49□□□□□ -2.17
SSX3Q99909 RNU6-879P-201ENST00000364328 108 ntBASIC1.49□□□□□ -2.17
SSX3Q99909 Y_RNA.557-201ENST00000384680 107 ntBASIC1.49□□□□□ -2.17
SSX3Q99909 FTH1P12-201ENST00000432137 551 ntBASIC1.49□□□□□ -2.17
SSX3Q99909 AC003989.2-201ENST00000440224 169 ntBASIC1.49□□□□□ -2.17
SSX3Q99909 AC073910.1-201ENST00000445047 438 ntBASIC1.49□□□□□ -2.17
SSX3Q99909 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.49□□□□□ -2.17
SSX3Q99909 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.49□□□□□ -2.17
SSX3Q99909 RPL26P26-201ENST00000480251 434 ntBASIC1.49□□□□□ -2.17
SSX3Q99909 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.49□□□□□ -2.17
SSX3Q99909 RNU1-142P-201ENST00000516682 145 ntBASIC1.49□□□□□ -2.17
SSX3Q99909 AC091144.1-201ENST00000519573 138 ntBASIC1.49□□□□□ -2.17
SSX3Q99909 CYCSP23-201ENST00000519781 313 ntBASIC1.49□□□□□ -2.17
SSX3Q99909 AC024995.1-201ENST00000523014 93 ntBASIC1.49□□□□□ -2.17
SSX3Q99909 MIR5690-201ENST00000583739 73 ntBASIC1.49□□□□□ -2.17
SSX3Q99909 AC125232.2-201ENST00000592457 143 ntBASIC1.49□□□□□ -2.17
SSX3Q99909 AL355073.2-201ENST00000612106 557 ntBASIC1.49□□□□□ -2.17
SSX3Q99909 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.49□□□□□ -2.17
SSX3Q99909 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.49□□□□□ -2.17
SSX3Q99909 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
SSX3Q99909 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
SSX3Q99909 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
SSX3Q99909 RNA5SP432-201ENST00000362480 116 ntBASIC1.48□□□□□ -2.17
SSX3Q99909 Y_RNA.358-201ENST00000365491 99 ntBASIC1.48□□□□□ -2.17
SSX3Q99909 Y_RNA.390-201ENST00000383932 102 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 153.5 ms