Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 Y_RNA.118-201ENST00000363300 101 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 Y_RNA.179-201ENST00000363844 90 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 RNU6-867P-201ENST00000364956 107 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 Y_RNA.358-201ENST00000365491 99 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 RNU6-281P-201ENST00000384212 103 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 SNORA67.2-201ENST00000384300 149 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 Y_RNA.557-201ENST00000384680 107 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 MIR676-201ENST00000390702 67 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 RNA5SP465-201ENST00000391195 109 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 MTCO2P27-201ENST00000420740 428 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.8□□□□□ -2.12
CDCA3Q99618 HMGN2P9-201ENST00000476875 229 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 HMGB3P17-201ENST00000504195 649 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 RNU6-1114P-201ENST00000516022 107 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.8□□□□□ -2.12
CDCA3Q99618 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.8□□□□□ -2.12
CDCA3Q99618 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.8□□□□□ -2.12
CDCA3Q99618 SNORD53B-201ENST00000577887 78 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 MIR3169-201ENST00000578032 83 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 MIR4795-201ENST00000584182 89 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 AC078899.2-201ENST00000595282 212 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 MZT1P2-201ENST00000604387 248 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 LARP7P1-201ENST00000605576 316 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 SNORD11B-201ENST00000607707 90 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 AL627230.6-201ENST00000611129 280 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 AC010999.1-201ENST00000611856 324 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 AC133104.2-201ENST00000615272 193 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 AL359697.1-201ENST00000624879 587 ntBASIC1.8□□□□□ -2.12
CDCA3Q99618 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.8□□□□□ -2.12
CDCA3Q99618 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
CDCA3Q99618 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CDCA3Q99618 Y_RNA.116-201ENST00000363292 103 ntBASIC1.79□□□□□ -2.12
CDCA3Q99618 SNORD87-201ENST00000364849 89 ntBASIC1.79□□□□□ -2.12
CDCA3Q99618 MIR586-201ENST00000385035 97 ntBASIC1.79□□□□□ -2.12
CDCA3Q99618 RNU1-139P-201ENST00000391307 165 ntBASIC1.79□□□□□ -2.12
CDCA3Q99618 RNU6-1156P-201ENST00000410365 100 ntBASIC1.79□□□□□ -2.12
CDCA3Q99618 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.79□□□□□ -2.12
CDCA3Q99618 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.79□□□□□ -2.12
CDCA3Q99618 ELOCP24-201ENST00000456370 334 ntBASIC1.79□□□□□ -2.12
CDCA3Q99618 RNU1-131P-201ENST00000458943 161 ntBASIC1.79□□□□□ -2.12
CDCA3Q99618 U8.22-201ENST00000459141 133 ntBASIC1.79□□□□□ -2.12
CDCA3Q99618 MIR2053-201ENST00000459295 91 ntBASIC1.79□□□□□ -2.12
CDCA3Q99618 AC091179.3-201ENST00000474761 144 ntBASIC1.79□□□□□ -2.12
CDCA3Q99618 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.79□□□□□ -2.12
CDCA3Q99618 RNU6-948P-201ENST00000516374 107 ntBASIC1.79□□□□□ -2.12
CDCA3Q99618 Y_RNA.675-201ENST00000516389 149 ntBASIC1.79□□□□□ -2.12
CDCA3Q99618 RAB11AP2-201ENST00000545905 639 ntBASIC1.79□□□□□ -2.12
CDCA3Q99618 AC093023.1-201ENST00000547375 507 ntBASIC1.79□□□□□ -2.12
CDCA3Q99618 AC090617.3-201ENST00000573670 475 ntBASIC1.79□□□□□ -2.12
CDCA3Q99618 MIR3935-201ENST00000583472 104 ntBASIC1.79□□□□□ -2.12
CDCA3Q99618 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.79□□□□□ -2.12
CDCA3Q99618 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.79□□□□□ -2.12
CDCA3Q99618 AL078596.1-201ENST00000624856 447 ntBASIC1.79□□□□□ -2.12
CDCA3Q99618 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.79□□□□□ -2.12
CDCA3Q99618 AL159152.1-201ENST00000635019 2587 ntBASIC1.78□□□□□ -2.12
CDCA3Q99618 RNU5F-3P-201ENST00000363767 117 ntBASIC1.78□□□□□ -2.12
CDCA3Q99618 RNU5E-4P-201ENST00000364931 120 ntBASIC1.78□□□□□ -2.12
CDCA3Q99618 RNU6-793P-201ENST00000384233 104 ntBASIC1.78□□□□□ -2.12
CDCA3Q99618 RNU6-975P-201ENST00000384296 105 ntBASIC1.78□□□□□ -2.12
CDCA3Q99618 MT-TD-201ENST00000387419 68 ntBASIC1.78□□□□□ -2.12
CDCA3Q99618 RNA5SP504-201ENST00000410676 117 ntBASIC1.78□□□□□ -2.12
CDCA3Q99618 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.78□□□□□ -2.12
CDCA3Q99618 EIF1P2-201ENST00000428233 350 ntBASIC1.78□□□□□ -2.12
CDCA3Q99618 AC236972.2-201ENST00000434979 310 ntBASIC1.78□□□□□ -2.12
CDCA3Q99618 AC009474.2-201ENST00000451383 136 ntBASIC1.78□□□□□ -2.12
CDCA3Q99618 RNU7-57P-201ENST00000459540 60 ntBASIC1.78□□□□□ -2.12
CDCA3Q99618 SNORD19B-201ENST00000459623 84 ntBASIC1.78□□□□□ -2.12
CDCA3Q99618 AC114982.1-201ENST00000469402 321 ntBASIC1.78□□□□□ -2.12
CDCA3Q99618 MRPS17P9-201ENST00000511924 393 ntBASIC1.78□□□□□ -2.12
CDCA3Q99618 AC067942.3-201ENST00000512025 362 ntBASIC1.78□□□□□ -2.12
CDCA3Q99618 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.78□□□□□ -2.12
CDCA3Q99618 CYP2C61P-201ENST00000604072 290 ntBASIC1.78□□□□□ -2.12
CDCA3Q99618 BX248123.2-201ENST00000606318 124 ntBASIC1.78□□□□□ -2.12
CDCA3Q99618 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.78□□□□□ -2.12
CDCA3Q99618 AC083806.3-201ENST00000614016 455 ntBASIC1.78□□□□□ -2.12
CDCA3Q99618 AC068205.3-201ENST00000636385 468 ntBASIC1.78□□□□□ -2.12
CDCA3Q99618 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
CDCA3Q99618 AL391987.6-201ENST00000305671 199 ntBASIC1.77□□□□□ -2.13
CDCA3Q99618 RNU6-879P-201ENST00000364328 108 ntBASIC1.77□□□□□ -2.13
CDCA3Q99618 RNU6-392P-201ENST00000364926 101 ntBASIC1.77□□□□□ -2.13
CDCA3Q99618 Y_RNA.415-201ENST00000384012 112 ntBASIC1.77□□□□□ -2.13
CDCA3Q99618 Y_RNA.577-201ENST00000384794 101 ntBASIC1.77□□□□□ -2.13
CDCA3Q99618 RNA5SP501-201ENST00000410990 112 ntBASIC1.77□□□□□ -2.13
CDCA3Q99618 AC004965.1-201ENST00000413033 213 ntBASIC1.77□□□□□ -2.13
CDCA3Q99618 AL357134.1-201ENST00000445848 426 ntBASIC1.77□□□□□ -2.13
CDCA3Q99618 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.77□□□□□ -2.13
CDCA3Q99618 AC105758.1-201ENST00000506038 399 ntBASIC1.77□□□□□ -2.13
CDCA3Q99618 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.77□□□□□ -2.13
CDCA3Q99618 AC022868.1-201ENST00000517767 391 ntBASIC1.77□□□□□ -2.13
CDCA3Q99618 CBX3P4-201ENST00000538909 354 ntBASIC1.77□□□□□ -2.13
CDCA3Q99618 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.77□□□□□ -2.13
CDCA3Q99618 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.77□□□□□ -2.13
CDCA3Q99618 AC126177.8-201ENST00000618339 1015 ntBASIC1.77□□□□□ -2.13
CDCA3Q99618 MTND5P35-201ENST00000557537 1720 ntBASIC1.77□□□□□ -2.13
CDCA3Q99618 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CDCA3Q99618 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CDCA3Q99618 AC006026.1-201ENST00000444025 1803 ntBASIC1.76□□□□□ -2.13
CDCA3Q99618 RNU4-79P-201ENST00000362764 141 ntBASIC1.76□□□□□ -2.13
CDCA3Q99618 Y_RNA.187-201ENST00000363918 113 ntBASIC1.76□□□□□ -2.13
CDCA3Q99618 Y_RNA.327-201ENST00000365201 102 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 222.2 ms