Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AL445646.1-201ENST00000431784 216 ntBASIC1.51□□□□□ -2.17
RAB40CQ96S21 AC069257.2-201ENST00000441819 155 ntBASIC1.51□□□□□ -2.17
RAB40CQ96S21 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.51□□□□□ -2.17
RAB40CQ96S21 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.51□□□□□ -2.17
RAB40CQ96S21 RNU6-264P-201ENST00000517134 104 ntBASIC1.51□□□□□ -2.17
RAB40CQ96S21 RNA5SP437-201ENST00000517249 129 ntBASIC1.51□□□□□ -2.17
RAB40CQ96S21 AC091144.1-201ENST00000519573 138 ntBASIC1.51□□□□□ -2.17
RAB40CQ96S21 MIR3945-201ENST00000581853 98 ntBASIC1.51□□□□□ -2.17
RAB40CQ96S21 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
RAB40CQ96S21 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RAB40CQ96S21 RNA5SP361-201ENST00000362686 118 ntBASIC1.5□□□□□ -2.17
RAB40CQ96S21 RNU6-1266P-201ENST00000362794 105 ntBASIC1.5□□□□□ -2.17
RAB40CQ96S21 RNU6-414P-201ENST00000363705 104 ntBASIC1.5□□□□□ -2.17
RAB40CQ96S21 RNU6-890P-201ENST00000384121 107 ntBASIC1.5□□□□□ -2.17
RAB40CQ96S21 RNU6-1297P-201ENST00000384415 104 ntBASIC1.5□□□□□ -2.17
RAB40CQ96S21 MIR329-1-201ENST00000385028 80 ntBASIC1.5□□□□□ -2.17
RAB40CQ96S21 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.5□□□□□ -2.17
RAB40CQ96S21 Y_RNA.595-201ENST00000410403 105 ntBASIC1.5□□□□□ -2.17
RAB40CQ96S21 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.5□□□□□ -2.17
RAB40CQ96S21 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.5□□□□□ -2.17
RAB40CQ96S21 FTH1P12-201ENST00000432137 551 ntBASIC1.5□□□□□ -2.17
RAB40CQ96S21 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.5□□□□□ -2.17
RAB40CQ96S21 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.5□□□□□ -2.17
RAB40CQ96S21 UQCRBP2-201ENST00000447827 297 ntBASIC1.5□□□□□ -2.17
RAB40CQ96S21 RPL30P15-201ENST00000457129 321 ntBASIC1.5□□□□□ -2.17
RAB40CQ96S21 Y_RNA.653-201ENST00000459091 95 ntBASIC1.5□□□□□ -2.17
RAB40CQ96S21 U8.22-201ENST00000459141 133 ntBASIC1.5□□□□□ -2.17
RAB40CQ96S21 AC022493.2-201ENST00000506122 481 ntBASIC1.5□□□□□ -2.17
RAB40CQ96S21 RNU6-120P-201ENST00000516077 103 ntBASIC1.5□□□□□ -2.17
RAB40CQ96S21 AC022868.1-201ENST00000517767 391 ntBASIC1.5□□□□□ -2.17
RAB40CQ96S21 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.5□□□□□ -2.17
RAB40CQ96S21 FRG2DP-202ENST00000566967 323 ntBASIC1.5□□□□□ -2.17
RAB40CQ96S21 MIR4648-201ENST00000580107 72 ntBASIC1.5□□□□□ -2.17
RAB40CQ96S21 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.49□□□□□ -2.17
RAB40CQ96S21 SNORA63D-201ENST00000364359 132 ntBASIC1.49□□□□□ -2.17
RAB40CQ96S21 RNA5SP323-201ENST00000391094 133 ntBASIC1.49□□□□□ -2.17
RAB40CQ96S21 RNA5SP467-201ENST00000391274 118 ntBASIC1.49□□□□□ -2.17
RAB40CQ96S21 RNU2-20P-201ENST00000410425 191 ntBASIC1.49□□□□□ -2.17
RAB40CQ96S21 TOMM22P2-201ENST00000430735 237 ntBASIC1.49□□□□□ -2.17
RAB40CQ96S21 HSPE1P9-201ENST00000440046 311 ntBASIC1.49□□□□□ -2.17
RAB40CQ96S21 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.49□□□□□ -2.17
RAB40CQ96S21 snoU13.9-201ENST00000458927 103 ntBASIC1.49□□□□□ -2.17
RAB40CQ96S21 MIR2053-201ENST00000459295 91 ntBASIC1.49□□□□□ -2.17
RAB40CQ96S21 RPL36AP21-201ENST00000490372 323 ntBASIC1.49□□□□□ -2.17
RAB40CQ96S21 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.49□□□□□ -2.17
RAB40CQ96S21 AC107393.1-201ENST00000512403 346 ntBASIC1.49□□□□□ -2.17
RAB40CQ96S21 RNU6-277P-201ENST00000516272 106 ntBASIC1.49□□□□□ -2.17
RAB40CQ96S21 CYCSP23-201ENST00000519781 313 ntBASIC1.49□□□□□ -2.17
RAB40CQ96S21 MIR4419B-201ENST00000577260 68 ntBASIC1.49□□□□□ -2.17
RAB40CQ96S21 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
RAB40CQ96S21 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.49□□□□□ -2.17
RAB40CQ96S21 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.49□□□□□ -2.17
RAB40CQ96S21 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.49□□□□□ -2.17
RAB40CQ96S21 AC133104.2-201ENST00000615272 193 ntBASIC1.49□□□□□ -2.17
RAB40CQ96S21 MIR1302-1-201ENST00000637932 143 ntBASIC1.49□□□□□ -2.17
RAB40CQ96S21 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
RAB40CQ96S21 Y_RNA.259-201ENST00000364619 101 ntBASIC1.48□□□□□ -2.17
RAB40CQ96S21 Y_RNA.384-201ENST00000383909 102 ntBASIC1.48□□□□□ -2.17
RAB40CQ96S21 Y_RNA.387-201ENST00000383918 102 ntBASIC1.48□□□□□ -2.17
RAB40CQ96S21 Y_RNA.577-201ENST00000384794 101 ntBASIC1.48□□□□□ -2.17
RAB40CQ96S21 MIR625-201ENST00000385047 85 ntBASIC1.48□□□□□ -2.17
RAB40CQ96S21 MTCYBP4-201ENST00000401524 249 ntBASIC1.48□□□□□ -2.17
RAB40CQ96S21 AC019129.1-201ENST00000403786 261 ntBASIC1.48□□□□□ -2.17
RAB40CQ96S21 MIR1267-201ENST00000408723 78 ntBASIC1.48□□□□□ -2.17
RAB40CQ96S21 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.48□□□□□ -2.17
RAB40CQ96S21 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.48□□□□□ -2.17
RAB40CQ96S21 MTCO3P10-201ENST00000455912 772 ntBASIC1.48□□□□□ -2.17
RAB40CQ96S21 AC091951.2-201ENST00000500762 203 ntBASIC1.48□□□□□ -2.17
RAB40CQ96S21 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.48□□□□□ -2.17
RAB40CQ96S21 RNA5SP481-201ENST00000516814 122 ntBASIC1.48□□□□□ -2.17
RAB40CQ96S21 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.48□□□□□ -2.17
RAB40CQ96S21 MIR548S-201ENST00000581352 82 ntBASIC1.48□□□□□ -2.17
RAB40CQ96S21 MIR4422-201ENST00000581938 83 ntBASIC1.48□□□□□ -2.17
RAB40CQ96S21 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.48□□□□□ -2.17
RAB40CQ96S21 AL132765.2-201ENST00000610812 351 ntBASIC1.48□□□□□ -2.17
RAB40CQ96S21 AC025253.1-201ENST00000613623 543 ntBASIC1.48□□□□□ -2.17
RAB40CQ96S21 AC104260.1-201ENST00000616660 539 ntBASIC1.48□□□□□ -2.17
RAB40CQ96S21 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.48□□□□□ -2.17
RAB40CQ96S21 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.48□□□□□ -2.17
RAB40CQ96S21 ZNF355P-201ENST00000427301 3216 ntBASIC1.48□□□□□ -2.17
RAB40CQ96S21 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RAB40CQ96S21 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.47□□□□□ -2.17
RAB40CQ96S21 RNU6-1145P-201ENST00000384246 107 ntBASIC1.47□□□□□ -2.17
RAB40CQ96S21 RNU6-360P-201ENST00000390944 104 ntBASIC1.47□□□□□ -2.17
RAB40CQ96S21 AC114482.1-201ENST00000418010 247 ntBASIC1.47□□□□□ -2.17
RAB40CQ96S21 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.47□□□□□ -2.17
RAB40CQ96S21 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RAB40CQ96S21 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.47□□□□□ -2.17
RAB40CQ96S21 AC093019.1-201ENST00000443135 252 ntBASIC1.47□□□□□ -2.17
RAB40CQ96S21 UBL5P3-201ENST00000475112 231 ntBASIC1.47□□□□□ -2.17
RAB40CQ96S21 RN7SKP49-201ENST00000516675 260 ntBASIC1.47□□□□□ -2.17
RAB40CQ96S21 AC024995.1-201ENST00000523014 93 ntBASIC1.47□□□□□ -2.17
RAB40CQ96S21 SUB1P3-201ENST00000564581 315 ntBASIC1.47□□□□□ -2.17
RAB40CQ96S21 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.47□□□□□ -2.17
RAB40CQ96S21 AC104984.5-201ENST00000586878 94 ntBASIC1.47□□□□□ -2.17
RAB40CQ96S21 AC022432.1-201ENST00000595739 310 ntBASIC1.47□□□□□ -2.17
RAB40CQ96S21 AL357075.2-201ENST00000614906 189 ntBASIC1.47□□□□□ -2.17
RAB40CQ96S21 MTND4LP32-201ENST00000636111 270 ntBASIC1.47□□□□□ -2.17
RAB40CQ96S21 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
RAB40CQ96S21 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 181.7 ms