Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL356280.1-201ENST00000603614 379 ntBASIC2.5□□□□□ -2.01
SNX18Q96RF0 AC006023.1-201ENST00000603944 259 ntBASIC2.5□□□□□ -2.01
SNX18Q96RF0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
SNX18Q96RF0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
SNX18Q96RF0 RNU6-545P-201ENST00000362681 104 ntBASIC2.49□□□□□ -2.01
SNX18Q96RF0 Y_RNA.76-201ENST00000362931 109 ntBASIC2.49□□□□□ -2.01
SNX18Q96RF0 Y_RNA.136-201ENST00000363444 102 ntBASIC2.49□□□□□ -2.01
SNX18Q96RF0 RNU6-200P-201ENST00000364743 107 ntBASIC2.49□□□□□ -2.01
SNX18Q96RF0 RNA5SP240-201ENST00000365355 128 ntBASIC2.49□□□□□ -2.01
SNX18Q96RF0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.49□□□□□ -2.01
SNX18Q96RF0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.49□□□□□ -2.01
SNX18Q96RF0 AL139132.1-201ENST00000431587 344 ntBASIC2.49□□□□□ -2.01
SNX18Q96RF0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.49□□□□□ -2.01
SNX18Q96RF0 RNU7-14P-201ENST00000459331 62 ntBASIC2.49□□□□□ -2.01
SNX18Q96RF0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.49□□□□□ -2.01
SNX18Q96RF0 RNU6-965P-201ENST00000516721 96 ntBASIC2.49□□□□□ -2.01
SNX18Q96RF0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.49□□□□□ -2.01
SNX18Q96RF0 AC018630.3-201ENST00000542637 96 ntBASIC2.49□□□□□ -2.01
SNX18Q96RF0 MIR4446-201ENST00000578505 67 ntBASIC2.49□□□□□ -2.01
SNX18Q96RF0 MIR5194-201ENST00000582634 120 ntBASIC2.49□□□□□ -2.01
SNX18Q96RF0 ZNF861P-201ENST00000588126 639 ntBASIC2.49□□□□□ -2.01
SNX18Q96RF0 DEFB117-201ENST00000602356 141 ntBASIC2.49□□□□□ -2.01
SNX18Q96RF0 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.49□□□□□ -2.01
SNX18Q96RF0 AC008873.1-201ENST00000625051 138 ntBASIC2.49□□□□□ -2.01
SNX18Q96RF0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.49□□□□□ -2.01
SNX18Q96RF0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SNX18Q96RF0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SNX18Q96RF0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
SNX18Q96RF0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SNX18Q96RF0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.48□□□□□ -2.01
SNX18Q96RF0 RNU4-80P-201ENST00000363200 141 ntBASIC2.48□□□□□ -2.01
SNX18Q96RF0 Y_RNA.117-201ENST00000363294 101 ntBASIC2.48□□□□□ -2.01
SNX18Q96RF0 RNU6-324P-201ENST00000363957 106 ntBASIC2.48□□□□□ -2.01
SNX18Q96RF0 RNU6-234P-201ENST00000365229 104 ntBASIC2.48□□□□□ -2.01
SNX18Q96RF0 RNU6-546P-201ENST00000383991 107 ntBASIC2.48□□□□□ -2.01
SNX18Q96RF0 MIR627-201ENST00000384979 97 ntBASIC2.48□□□□□ -2.01
SNX18Q96RF0 MIR548B-201ENST00000385247 97 ntBASIC2.48□□□□□ -2.01
SNX18Q96RF0 RNU6-651P-201ENST00000411040 105 ntBASIC2.48□□□□□ -2.01
SNX18Q96RF0 RNU2-32P-201ENST00000411193 191 ntBASIC2.48□□□□□ -2.01
SNX18Q96RF0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.48□□□□□ -2.01
SNX18Q96RF0 AL135938.1-201ENST00000443141 297 ntBASIC2.48□□□□□ -2.01
SNX18Q96RF0 EEF1B2P7-201ENST00000451177 676 ntBASIC2.48□□□□□ -2.01
SNX18Q96RF0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.48□□□□□ -2.01
SNX18Q96RF0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.48□□□□□ -2.01
SNX18Q96RF0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.48□□□□□ -2.01
SNX18Q96RF0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.48□□□□□ -2.01
SNX18Q96RF0 RNA5SP367-201ENST00000516557 118 ntBASIC2.48□□□□□ -2.01
SNX18Q96RF0 RNU2-12P-201ENST00000517216 168 ntBASIC2.48□□□□□ -2.01
SNX18Q96RF0 AC090616.3-201ENST00000582184 217 ntBASIC2.48□□□□□ -2.01
SNX18Q96RF0 AL512605.2-201ENST00000592972 256 ntBASIC2.48□□□□□ -2.01
SNX18Q96RF0 AL162424.1-201ENST00000602325 221 ntBASIC2.48□□□□□ -2.01
SNX18Q96RF0 AC006380.1-201ENST00000603598 186 ntBASIC2.48□□□□□ -2.01
SNX18Q96RF0 AL355297.2-201ENST00000604792 129 ntBASIC2.48□□□□□ -2.01
SNX18Q96RF0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.48□□□□□ -2.01
SNX18Q96RF0 Z82209.1-201ENST00000422141 2135 ntBASIC2.48□□□□□ -2.01
SNX18Q96RF0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
SNX18Q96RF0 U3.8-201ENST00000363675 217 ntBASIC2.47□□□□□ -2.01
SNX18Q96RF0 RNY1-201ENST00000364228 113 ntBASIC2.47□□□□□ -2.01
SNX18Q96RF0 Y_RNA.274-201ENST00000364714 101 ntBASIC2.47□□□□□ -2.01
SNX18Q96RF0 Y_RNA.275-201ENST00000364726 110 ntBASIC2.47□□□□□ -2.01
SNX18Q96RF0 RNU6-662P-201ENST00000384253 104 ntBASIC2.47□□□□□ -2.01
SNX18Q96RF0 SNORA80E-201ENST00000384744 137 ntBASIC2.47□□□□□ -2.01
SNX18Q96RF0 MIR95-201ENST00000385072 81 ntBASIC2.47□□□□□ -2.01
SNX18Q96RF0 TOMM22P2-201ENST00000430735 237 ntBASIC2.47□□□□□ -2.01
SNX18Q96RF0 AL445687.1-201ENST00000439946 251 ntBASIC2.47□□□□□ -2.01
SNX18Q96RF0 HMGN2P9-201ENST00000476875 229 ntBASIC2.47□□□□□ -2.01
SNX18Q96RF0 RNA5SP356-201ENST00000515972 94 ntBASIC2.47□□□□□ -2.01
SNX18Q96RF0 SNORA27.4-201ENST00000516650 95 ntBASIC2.47□□□□□ -2.01
SNX18Q96RF0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SNX18Q96RF0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
SNX18Q96RF0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
SNX18Q96RF0 RNU1-23P-201ENST00000363361 144 ntBASIC2.46□□□□□ -2.02
SNX18Q96RF0 Y_RNA.200-201ENST00000364018 102 ntBASIC2.46□□□□□ -2.02
SNX18Q96RF0 Y_RNA.297-201ENST00000364950 91 ntBASIC2.46□□□□□ -2.02
SNX18Q96RF0 Y_RNA.329-201ENST00000365209 107 ntBASIC2.46□□□□□ -2.02
SNX18Q96RF0 RNU6-1289P-201ENST00000384431 106 ntBASIC2.46□□□□□ -2.02
SNX18Q96RF0 MIR586-201ENST00000385035 97 ntBASIC2.46□□□□□ -2.02
SNX18Q96RF0 U3.40-201ENST00000408706 208 ntBASIC2.46□□□□□ -2.02
SNX18Q96RF0 MIR1298-201ENST00000408783 112 ntBASIC2.46□□□□□ -2.02
SNX18Q96RF0 Y_RNA.590-201ENST00000410140 107 ntBASIC2.46□□□□□ -2.02
SNX18Q96RF0 AL139156.1-201ENST00000412785 841 ntBASIC2.46□□□□□ -2.02
SNX18Q96RF0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
SNX18Q96RF0 AC105272.1-201ENST00000438604 198 ntBASIC2.46□□□□□ -2.02
SNX18Q96RF0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.46□□□□□ -2.02
SNX18Q96RF0 ATP5EP1-201ENST00000510257 156 ntBASIC2.46□□□□□ -2.02
SNX18Q96RF0 AC109329.2-201ENST00000519658 482 ntBASIC2.46□□□□□ -2.02
SNX18Q96RF0 AC022616.8-201ENST00000533569 253 ntBASIC2.46□□□□□ -2.02
SNX18Q96RF0 ELOCP29-201ENST00000588193 334 ntBASIC2.46□□□□□ -2.02
SNX18Q96RF0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.46□□□□□ -2.02
SNX18Q96RF0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SNX18Q96RF0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SNX18Q96RF0 UBE2WP1-201ENST00000362030 340 ntBASIC2.45□□□□□ -2.02
SNX18Q96RF0 MIR300-201ENST00000401138 83 ntBASIC2.45□□□□□ -2.02
SNX18Q96RF0 RNU2-61P-201ENST00000411069 191 ntBASIC2.45□□□□□ -2.02
SNX18Q96RF0 RNU2-64P-201ENST00000411315 191 ntBASIC2.45□□□□□ -2.02
SNX18Q96RF0 AC009310.1-201ENST00000414414 451 ntBASIC2.45□□□□□ -2.02
SNX18Q96RF0 AC003685.2-201ENST00000422795 395 ntBASIC2.45□□□□□ -2.02
SNX18Q96RF0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.45□□□□□ -2.02
SNX18Q96RF0 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.45□□□□□ -2.02
SNX18Q96RF0 SNORD116-28-201ENST00000516123 91 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms