Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MIR8054-201ENST00000620877 86 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 AC006504.8-201ENST00000621046 635 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 AL133216.2-202ENST00000634512 349 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 AC099654.5-201ENST00000636479 350 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 AC068647.2-201ENST00000637380 353 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 AC099654.12-201ENST00000639868 649 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 MTND4P12-201ENST00000498999 1377 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
RPRD1AQ96P16 RNU6-873P-201ENST00000363833 107 ntBASIC1.07□□□□□ -2.24
RPRD1AQ96P16 Y_RNA.415-201ENST00000384012 112 ntBASIC1.07□□□□□ -2.24
RPRD1AQ96P16 RNU6-483P-201ENST00000384088 108 ntBASIC1.07□□□□□ -2.24
RPRD1AQ96P16 RNU6-908P-201ENST00000410160 94 ntBASIC1.07□□□□□ -2.24
RPRD1AQ96P16 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.07□□□□□ -2.24
RPRD1AQ96P16 PGBD4P5-201ENST00000445958 426 ntBASIC1.07□□□□□ -2.24
RPRD1AQ96P16 RNU7-66P-201ENST00000459469 62 ntBASIC1.07□□□□□ -2.24
RPRD1AQ96P16 HMGN2P26-201ENST00000463169 339 ntBASIC1.07□□□□□ -2.24
RPRD1AQ96P16 AC107401.1-201ENST00000503426 685 ntBASIC1.07□□□□□ -2.24
RPRD1AQ96P16 RNU6-1281P-201ENST00000516223 105 ntBASIC1.07□□□□□ -2.24
RPRD1AQ96P16 RNA5SP102-201ENST00000516865 106 ntBASIC1.07□□□□□ -2.24
RPRD1AQ96P16 RNA5SP404-201ENST00000517118 132 ntBASIC1.07□□□□□ -2.24
RPRD1AQ96P16 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.07□□□□□ -2.24
RPRD1AQ96P16 FRG2DP-202ENST00000566967 323 ntBASIC1.07□□□□□ -2.24
RPRD1AQ96P16 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.07□□□□□ -2.24
RPRD1AQ96P16 AL162413.1-201ENST00000603198 110 ntBASIC1.07□□□□□ -2.24
RPRD1AQ96P16 AC092954.2-201ENST00000609103 430 ntBASIC1.07□□□□□ -2.24
RPRD1AQ96P16 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
RPRD1AQ96P16 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.06□□□□□ -2.24
RPRD1AQ96P16 Y_RNA.51-201ENST00000362725 102 ntBASIC1.06□□□□□ -2.24
RPRD1AQ96P16 RNU6-727P-201ENST00000363592 107 ntBASIC1.06□□□□□ -2.24
RPRD1AQ96P16 SNORD114-27-201ENST00000363766 70 ntBASIC1.06□□□□□ -2.24
RPRD1AQ96P16 SNORD116-1-201ENST00000384335 95 ntBASIC1.06□□□□□ -2.24
RPRD1AQ96P16 RNU6-1186P-201ENST00000410429 97 ntBASIC1.06□□□□□ -2.24
RPRD1AQ96P16 AC245047.3-201ENST00000429428 127 ntBASIC1.06□□□□□ -2.24
RPRD1AQ96P16 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.06□□□□□ -2.24
RPRD1AQ96P16 MTCO3P18-201ENST00000440206 761 ntBASIC1.06□□□□□ -2.24
RPRD1AQ96P16 RPL39P38-201ENST00000467018 153 ntBASIC1.06□□□□□ -2.24
RPRD1AQ96P16 AC092991.1-201ENST00000477176 376 ntBASIC1.06□□□□□ -2.24
RPRD1AQ96P16 RPL30P10-201ENST00000488148 337 ntBASIC1.06□□□□□ -2.24
RPRD1AQ96P16 MIR5695-201ENST00000579717 85 ntBASIC1.06□□□□□ -2.24
RPRD1AQ96P16 POLR3GP2-201ENST00000588366 668 ntBASIC1.06□□□□□ -2.24
RPRD1AQ96P16 DISC2.1-201ENST00000612827 205 ntBASIC1.06□□□□□ -2.24
RPRD1AQ96P16 AL138726.1-201ENST00000614873 333 ntBASIC1.06□□□□□ -2.24
RPRD1AQ96P16 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
RPRD1AQ96P16 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
RPRD1AQ96P16 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
RPRD1AQ96P16 U3.8-201ENST00000363675 217 ntBASIC1.05□□□□□ -2.24
RPRD1AQ96P16 RNU1-124P-201ENST00000363861 145 ntBASIC1.05□□□□□ -2.24
RPRD1AQ96P16 Y_RNA.226-201ENST00000364337 114 ntBASIC1.05□□□□□ -2.24
RPRD1AQ96P16 Y_RNA.256-201ENST00000364594 104 ntBASIC1.05□□□□□ -2.24
RPRD1AQ96P16 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.05□□□□□ -2.24
RPRD1AQ96P16 MIR499A-201ENST00000384903 122 ntBASIC1.05□□□□□ -2.24
RPRD1AQ96P16 MIR517A-201ENST00000385001 87 ntBASIC1.05□□□□□ -2.24
RPRD1AQ96P16 MIR153-2-201ENST00000385225 87 ntBASIC1.05□□□□□ -2.24
RPRD1AQ96P16 RN7SKP200-201ENST00000410564 320 ntBASIC1.05□□□□□ -2.24
RPRD1AQ96P16 DAP3P1-201ENST00000441522 278 ntBASIC1.05□□□□□ -2.24
RPRD1AQ96P16 NDUFB4P10-201ENST00000452541 359 ntBASIC1.05□□□□□ -2.24
RPRD1AQ96P16 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.05□□□□□ -2.24
RPRD1AQ96P16 AC091179.3-201ENST00000474761 144 ntBASIC1.05□□□□□ -2.24
RPRD1AQ96P16 SNORD116-28-201ENST00000516123 91 ntBASIC1.05□□□□□ -2.24
RPRD1AQ96P16 UBL5P4-201ENST00000562584 236 ntBASIC1.05□□□□□ -2.24
RPRD1AQ96P16 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.05□□□□□ -2.24
RPRD1AQ96P16 AC022432.1-201ENST00000595739 310 ntBASIC1.05□□□□□ -2.24
RPRD1AQ96P16 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.05□□□□□ -2.24
RPRD1AQ96P16 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.05□□□□□ -2.24
RPRD1AQ96P16 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.05□□□□□ -2.24
RPRD1AQ96P16 U6.73-201ENST00000619194 103 ntBASIC1.05□□□□□ -2.24
RPRD1AQ96P16 AC012676.2-201ENST00000619258 186 ntBASIC1.05□□□□□ -2.24
RPRD1AQ96P16 AC027335.2-201ENST00000624030 375 ntBASIC1.05□□□□□ -2.24
RPRD1AQ96P16 Y_RNA.135-201ENST00000363439 95 ntBASIC1.04□□□□□ -2.24
RPRD1AQ96P16 SNORA25-201ENST00000384384 134 ntBASIC1.04□□□□□ -2.24
RPRD1AQ96P16 RNU6-440P-201ENST00000390882 105 ntBASIC1.04□□□□□ -2.24
RPRD1AQ96P16 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.04□□□□□ -2.24
RPRD1AQ96P16 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.04□□□□□ -2.24
RPRD1AQ96P16 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.04□□□□□ -2.24
RPRD1AQ96P16 RNU6-1198P-201ENST00000516904 67 ntBASIC1.04□□□□□ -2.24
RPRD1AQ96P16 AC004584.2-201ENST00000570407 410 ntBASIC1.04□□□□□ -2.24
RPRD1AQ96P16 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.04□□□□□ -2.24
RPRD1AQ96P16 AL022345.2-201ENST00000606307 135 ntBASIC1.04□□□□□ -2.24
RPRD1AQ96P16 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
RPRD1AQ96P16 AC009248.2-201ENST00000619826 254 ntBASIC1.04□□□□□ -2.24
RPRD1AQ96P16 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.04□□□□□ -2.24
RPRD1AQ96P16 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.04□□□□□ -2.24
RPRD1AQ96P16 RNU6-451P-201ENST00000362921 107 ntBASIC1.03□□□□□ -2.24
RPRD1AQ96P16 RNU4-38P-201ENST00000364472 129 ntBASIC1.03□□□□□ -2.24
RPRD1AQ96P16 RNU6-1080P-201ENST00000383982 107 ntBASIC1.03□□□□□ -2.24
RPRD1AQ96P16 RNU6-505P-201ENST00000384427 107 ntBASIC1.03□□□□□ -2.24
RPRD1AQ96P16 MRPL42P3-201ENST00000401492 326 ntBASIC1.03□□□□□ -2.24
RPRD1AQ96P16 MIR1276-201ENST00000408707 83 ntBASIC1.03□□□□□ -2.24
RPRD1AQ96P16 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.03□□□□□ -2.24
RPRD1AQ96P16 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.03□□□□□ -2.24
RPRD1AQ96P16 DYNLT3P2-201ENST00000442517 295 ntBASIC1.03□□□□□ -2.24
RPRD1AQ96P16 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.03□□□□□ -2.24
RPRD1AQ96P16 TRBVA-201ENST00000498804 316 ntBASIC1.03□□□□□ -2.24
RPRD1AQ96P16 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.03□□□□□ -2.24
RPRD1AQ96P16 RNU7-99P-201ENST00000516271 62 ntBASIC1.03□□□□□ -2.24
RPRD1AQ96P16 AL137100.2-201ENST00000555786 315 ntBASIC1.03□□□□□ -2.24
RPRD1AQ96P16 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.03□□□□□ -2.24
RPRD1AQ96P16 BX284668.6-201ENST00000606899 438 ntBASIC1.03□□□□□ -2.24
RPRD1AQ96P16 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.03□□□□□ -2.24
RPRD1AQ96P16 RNU6-17P-201ENST00000384245 107 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 186.3 ms