Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 RNU2-20P-201ENST00000410425 191 ntBASIC2.46□□□□□ -2.02
CCDC136Q96JN2 AC009310.1-201ENST00000414414 451 ntBASIC2.46□□□□□ -2.02
CCDC136Q96JN2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC136Q96JN2 DPH3P2-201ENST00000422618 250 ntBASIC2.46□□□□□ -2.02
CCDC136Q96JN2 UBE2V1P7-201ENST00000446395 340 ntBASIC2.46□□□□□ -2.02
CCDC136Q96JN2 SNORA31.17-201ENST00000516953 127 ntBASIC2.46□□□□□ -2.02
CCDC136Q96JN2 AC069114.2-201ENST00000604699 304 ntBASIC2.46□□□□□ -2.02
CCDC136Q96JN2 AL353149.1-201ENST00000610667 244 ntBASIC2.46□□□□□ -2.02
CCDC136Q96JN2 RNU6-1301P-201ENST00000362724 104 ntBASIC2.45□□□□□ -2.02
CCDC136Q96JN2 U8.2-201ENST00000363156 134 ntBASIC2.45□□□□□ -2.02
CCDC136Q96JN2 Y_RNA.287-201ENST00000364853 94 ntBASIC2.45□□□□□ -2.02
CCDC136Q96JN2 Y_RNA.314-201ENST00000365114 102 ntBASIC2.45□□□□□ -2.02
CCDC136Q96JN2 Y_RNA.592-201ENST00000410274 109 ntBASIC2.45□□□□□ -2.02
CCDC136Q96JN2 AC245047.4-201ENST00000433189 144 ntBASIC2.45□□□□□ -2.02
CCDC136Q96JN2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC136Q96JN2 NDUFB4P10-201ENST00000452541 359 ntBASIC2.45□□□□□ -2.02
CCDC136Q96JN2 AC112492.4-201ENST00000456549 352 ntBASIC2.45□□□□□ -2.02
CCDC136Q96JN2 RN7SL429P-201ENST00000479090 223 ntBASIC2.45□□□□□ -2.02
CCDC136Q96JN2 RN7SL489P-201ENST00000486185 223 ntBASIC2.45□□□□□ -2.02
CCDC136Q96JN2 RN7SL327P-201ENST00000488659 223 ntBASIC2.45□□□□□ -2.02
CCDC136Q96JN2 Y_RNA.675-201ENST00000516389 149 ntBASIC2.45□□□□□ -2.02
CCDC136Q96JN2 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC136Q96JN2 MIR3198-2-201ENST00000577868 80 ntBASIC2.45□□□□□ -2.02
CCDC136Q96JN2 AC080078.3-201ENST00000605407 463 ntBASIC2.45□□□□□ -2.02
CCDC136Q96JN2 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC136Q96JN2 RN7SL853P-201ENST00000617250 223 ntBASIC2.45□□□□□ -2.02
CCDC136Q96JN2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.45□□□□□ -2.02
CCDC136Q96JN2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC136Q96JN2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC136Q96JN2 RNU6-112P-201ENST00000363599 104 ntBASIC2.44□□□□□ -2.02
CCDC136Q96JN2 SNORA70B-201ENST00000384210 135 ntBASIC2.44□□□□□ -2.02
CCDC136Q96JN2 SNORA64-201ENST00000384674 134 ntBASIC2.44□□□□□ -2.02
CCDC136Q96JN2 MIR934-201ENST00000401241 83 ntBASIC2.44□□□□□ -2.02
CCDC136Q96JN2 MIR1253-201ENST00000408273 105 ntBASIC2.44□□□□□ -2.02
CCDC136Q96JN2 ELOCP21-201ENST00000412558 336 ntBASIC2.44□□□□□ -2.02
CCDC136Q96JN2 AF228730.4-201ENST00000421457 183 ntBASIC2.44□□□□□ -2.02
CCDC136Q96JN2 AC096644.2-201ENST00000429278 159 ntBASIC2.44□□□□□ -2.02
CCDC136Q96JN2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC136Q96JN2 RNU7-152P-201ENST00000458982 64 ntBASIC2.44□□□□□ -2.02
CCDC136Q96JN2 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC136Q96JN2 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.44□□□□□ -2.02
CCDC136Q96JN2 RNU1-41P-201ENST00000516161 162 ntBASIC2.44□□□□□ -2.02
CCDC136Q96JN2 RNU1-48P-201ENST00000516400 162 ntBASIC2.44□□□□□ -2.02
CCDC136Q96JN2 CBX3P4-201ENST00000538909 354 ntBASIC2.44□□□□□ -2.02
CCDC136Q96JN2 MIR3122-201ENST00000577243 73 ntBASIC2.44□□□□□ -2.02
CCDC136Q96JN2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC136Q96JN2 MIR4713-201ENST00000582691 75 ntBASIC2.44□□□□□ -2.02
CCDC136Q96JN2 LARP7P1-201ENST00000605576 316 ntBASIC2.44□□□□□ -2.02
CCDC136Q96JN2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC136Q96JN2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.44□□□□□ -2.02
CCDC136Q96JN2 RNU6-490P-201ENST00000362985 107 ntBASIC2.43□□□□□ -2.02
CCDC136Q96JN2 RNA5SP363-201ENST00000365072 115 ntBASIC2.43□□□□□ -2.02
CCDC136Q96JN2 RNU6-439P-201ENST00000384188 106 ntBASIC2.43□□□□□ -2.02
CCDC136Q96JN2 SNORA67.3-201ENST00000384366 140 ntBASIC2.43□□□□□ -2.02
CCDC136Q96JN2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC136Q96JN2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC136Q96JN2 AC008834.1-201ENST00000511612 175 ntBASIC2.43□□□□□ -2.02
CCDC136Q96JN2 RNU7-4P-201ENST00000516961 62 ntBASIC2.43□□□□□ -2.02
CCDC136Q96JN2 SNORA44.1-201ENST00000517031 108 ntBASIC2.43□□□□□ -2.02
CCDC136Q96JN2 MIR3945-201ENST00000581853 98 ntBASIC2.43□□□□□ -2.02
CCDC136Q96JN2 MTND5P10-201ENST00000603719 1809 ntBASIC2.42□□□□□ -2.02
CCDC136Q96JN2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
CCDC136Q96JN2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
CCDC136Q96JN2 RNU6-1240P-201ENST00000365155 104 ntBASIC2.42□□□□□ -2.02
CCDC136Q96JN2 RNU6-296P-201ENST00000384608 107 ntBASIC2.42□□□□□ -2.02
CCDC136Q96JN2 MT-TD-201ENST00000387419 68 ntBASIC2.42□□□□□ -2.02
CCDC136Q96JN2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CCDC136Q96JN2 Y_RNA.605-201ENST00000410577 105 ntBASIC2.42□□□□□ -2.02
CCDC136Q96JN2 RN7SKP192-201ENST00000411291 327 ntBASIC2.42□□□□□ -2.02
CCDC136Q96JN2 AC008134.1-201ENST00000420943 193 ntBASIC2.42□□□□□ -2.02
CCDC136Q96JN2 MTND4P28-201ENST00000426217 387 ntBASIC2.42□□□□□ -2.02
CCDC136Q96JN2 AC236972.2-201ENST00000434979 310 ntBASIC2.42□□□□□ -2.02
CCDC136Q96JN2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC136Q96JN2 RPL23AP63-201ENST00000498752 471 ntBASIC2.42□□□□□ -2.02
CCDC136Q96JN2 RN7SKP49-201ENST00000516675 260 ntBASIC2.42□□□□□ -2.02
CCDC136Q96JN2 AL117336.2-201ENST00000602435 335 ntBASIC2.42□□□□□ -2.02
CCDC136Q96JN2 RNU4-79P-201ENST00000362764 141 ntBASIC2.41□□□□□ -2.02
CCDC136Q96JN2 Y_RNA.187-201ENST00000363918 113 ntBASIC2.41□□□□□ -2.02
CCDC136Q96JN2 Y_RNA.463-201ENST00000384271 102 ntBASIC2.41□□□□□ -2.02
CCDC136Q96JN2 RNA5SP467-201ENST00000391274 118 ntBASIC2.41□□□□□ -2.02
CCDC136Q96JN2 SNORD12B-201ENST00000410433 91 ntBASIC2.41□□□□□ -2.02
CCDC136Q96JN2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC136Q96JN2 CST2P1-201ENST00000425770 87 ntBASIC2.41□□□□□ -2.02
CCDC136Q96JN2 AC092473.1-201ENST00000441098 221 ntBASIC2.41□□□□□ -2.02
CCDC136Q96JN2 RPS29P21-201ENST00000496272 170 ntBASIC2.41□□□□□ -2.02
CCDC136Q96JN2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC136Q96JN2 SNORA40.9-201ENST00000515895 93 ntBASIC2.41□□□□□ -2.02
CCDC136Q96JN2 RNA5SP437-201ENST00000517249 129 ntBASIC2.41□□□□□ -2.02
CCDC136Q96JN2 AC027419.1-201ENST00000522976 328 ntBASIC2.41□□□□□ -2.02
CCDC136Q96JN2 AC084364.2-201ENST00000546924 395 ntBASIC2.41□□□□□ -2.02
CCDC136Q96JN2 AC018448.1-201ENST00000552843 316 ntBASIC2.41□□□□□ -2.02
CCDC136Q96JN2 MIR4648-201ENST00000580107 72 ntBASIC2.41□□□□□ -2.02
CCDC136Q96JN2 AC010900.2-201ENST00000604508 210 ntBASIC2.41□□□□□ -2.02
CCDC136Q96JN2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC136Q96JN2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC136Q96JN2 AC104985.2-201ENST00000620598 500 ntBASIC2.41□□□□□ -2.02
CCDC136Q96JN2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC136Q96JN2 ZNF72P-201ENST00000425869 1908 ntBASIC2.4□□□□□ -2.02
CCDC136Q96JN2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.4□□□□□ -2.02
CCDC136Q96JN2 RNU6-1115P-201ENST00000362490 106 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms