Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RN7SKP18-201ENST00000516005 275 ntBASIC4.33□□□□□ -1.72
LRCH3Q96II8 AC079598.5-201ENST00000547460 117 ntBASIC4.33□□□□□ -1.72
LRCH3Q96II8 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.33□□□□□ -1.72
LRCH3Q96II8 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRCH3Q96II8 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
LRCH3Q96II8 AC009487.4-201ENST00000624969 3585 ntBASIC4.33□□□□□ -1.72
LRCH3Q96II8 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.33□□□□□ -1.72
LRCH3Q96II8 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
LRCH3Q96II8 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRCH3Q96II8 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
LRCH3Q96II8 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.32□□□□□ -1.72
LRCH3Q96II8 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.32□□□□□ -1.72
LRCH3Q96II8 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRCH3Q96II8 SNORD116-22-201ENST00000384430 92 ntBASIC4.32□□□□□ -1.72
LRCH3Q96II8 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.32□□□□□ -1.72
LRCH3Q96II8 DBIP2-201ENST00000419076 262 ntBASIC4.32□□□□□ -1.72
LRCH3Q96II8 AL133162.1-201ENST00000463228 453 ntBASIC4.32□□□□□ -1.72
LRCH3Q96II8 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.32□□□□□ -1.72
LRCH3Q96II8 RNU7-6P-201ENST00000516845 62 ntBASIC4.32□□□□□ -1.72
LRCH3Q96II8 SCARNA14-201ENST00000516903 136 ntBASIC4.32□□□□□ -1.72
LRCH3Q96II8 RNU6-1231P-201ENST00000517185 103 ntBASIC4.32□□□□□ -1.72
LRCH3Q96II8 AC006386.2-201ENST00000624491 75 ntBASIC4.32□□□□□ -1.72
LRCH3Q96II8 AC012005.1-201ENST00000624575 75 ntBASIC4.32□□□□□ -1.72
LRCH3Q96II8 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LRCH3Q96II8 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRCH3Q96II8 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.32□□□□□ -1.72
LRCH3Q96II8 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRCH3Q96II8 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRCH3Q96II8 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRCH3Q96II8 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRCH3Q96II8 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRCH3Q96II8 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
LRCH3Q96II8 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRCH3Q96II8 RNU6-219P-201ENST00000364728 107 ntBASIC4.31□□□□□ -1.72
LRCH3Q96II8 SNORD31B-201ENST00000364977 69 ntBASIC4.31□□□□□ -1.72
LRCH3Q96II8 RNU6-234P-201ENST00000365229 104 ntBASIC4.31□□□□□ -1.72
LRCH3Q96II8 RNA5SP310-201ENST00000459084 116 ntBASIC4.31□□□□□ -1.72
LRCH3Q96II8 RPL36AP48-201ENST00000485521 314 ntBASIC4.31□□□□□ -1.72
LRCH3Q96II8 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.31□□□□□ -1.72
LRCH3Q96II8 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.31□□□□□ -1.72
LRCH3Q96II8 MIR5684-201ENST00000585074 65 ntBASIC4.31□□□□□ -1.72
LRCH3Q96II8 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.31□□□□□ -1.72
LRCH3Q96II8 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LRCH3Q96II8 USP8P1-201ENST00000494673 3183 ntBASIC4.31□□□□□ -1.72
LRCH3Q96II8 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
LRCH3Q96II8 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.31□□□□□ -1.72
LRCH3Q96II8 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.3□□□□□ -1.72
LRCH3Q96II8 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
LRCH3Q96II8 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.3□□□□□ -1.72
LRCH3Q96II8 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRCH3Q96II8 Y_RNA.190-201ENST00000363964 101 ntBASIC4.3□□□□□ -1.72
LRCH3Q96II8 SNORA38.1-201ENST00000364172 131 ntBASIC4.3□□□□□ -1.72
LRCH3Q96II8 Y_RNA.253-201ENST00000364562 112 ntBASIC4.3□□□□□ -1.72
LRCH3Q96II8 MIR1294-201ENST00000408503 142 ntBASIC4.3□□□□□ -1.72
LRCH3Q96II8 RNA5SP179-201ENST00000517284 121 ntBASIC4.3□□□□□ -1.72
LRCH3Q96II8 AC006064.5-201ENST00000541782 248 ntBASIC4.3□□□□□ -1.72
LRCH3Q96II8 MIR4694-201ENST00000578534 80 ntBASIC4.3□□□□□ -1.72
LRCH3Q96II8 MIR4305-201ENST00000583252 102 ntBASIC4.3□□□□□ -1.72
LRCH3Q96II8 AL110115.1-201ENST00000614396 364 ntBASIC4.3□□□□□ -1.72
LRCH3Q96II8 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
LRCH3Q96II8 FAM35DP-201ENST00000323387 2712 ntBASIC4.3□□□□□ -1.72
LRCH3Q96II8 AC006504.1-201ENST00000562493 3666 ntBASIC4.3□□□□□ -1.72
LRCH3Q96II8 RNA5SP307-201ENST00000362863 116 ntBASIC4.29□□□□□ -1.72
LRCH3Q96II8 RNU1-72P-201ENST00000362976 153 ntBASIC4.29□□□□□ -1.72
LRCH3Q96II8 RNA5SP50-201ENST00000363731 107 ntBASIC4.29□□□□□ -1.72
LRCH3Q96II8 SNORD115-35-201ENST00000365122 82 ntBASIC4.29□□□□□ -1.72
LRCH3Q96II8 RNU6-1189P-201ENST00000383958 107 ntBASIC4.29□□□□□ -1.72
LRCH3Q96II8 Y_RNA.410-201ENST00000383992 113 ntBASIC4.29□□□□□ -1.72
LRCH3Q96II8 MIR577-201ENST00000385196 96 ntBASIC4.29□□□□□ -1.72
LRCH3Q96II8 HLA-N-201ENST00000437516 135 ntBASIC4.29□□□□□ -1.72
LRCH3Q96II8 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.29□□□□□ -1.72
LRCH3Q96II8 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC4.29□□□□□ -1.72
LRCH3Q96II8 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC4.29□□□□□ -1.72
LRCH3Q96II8 AC091167.4-201ENST00000605079 184 ntBASIC4.29□□□□□ -1.72
LRCH3Q96II8 LINC00901.1-201ENST00000617252 152 ntBASIC4.29□□□□□ -1.72
LRCH3Q96II8 AC007546.2-201ENST00000623996 360 ntBASIC4.29□□□□□ -1.72
LRCH3Q96II8 AC090517.3-201ENST00000625170 141 ntBASIC4.29□□□□□ -1.72
LRCH3Q96II8 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
LRCH3Q96II8 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.28□□□□□ -1.72
LRCH3Q96II8 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRCH3Q96II8 RNU6-832P-201ENST00000363319 107 ntBASIC4.28□□□□□ -1.72
LRCH3Q96II8 RNA5SP51-201ENST00000364750 119 ntBASIC4.28□□□□□ -1.72
LRCH3Q96II8 Y_RNA.507-201ENST00000384500 99 ntBASIC4.28□□□□□ -1.72
LRCH3Q96II8 MIR520G-201ENST00000385064 90 ntBASIC4.28□□□□□ -1.72
LRCH3Q96II8 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
LRCH3Q96II8 MIR1251-201ENST00000408552 70 ntBASIC4.28□□□□□ -1.72
LRCH3Q96II8 MRPL35P3-201ENST00000421557 364 ntBASIC4.28□□□□□ -1.72
LRCH3Q96II8 RNU2-35P-201ENST00000516446 142 ntBASIC4.28□□□□□ -1.72
LRCH3Q96II8 RNU7-70P-201ENST00000516941 66 ntBASIC4.28□□□□□ -1.72
LRCH3Q96II8 YPEL5P2-201ENST00000605553 359 ntBASIC4.28□□□□□ -1.72
LRCH3Q96II8 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRCH3Q96II8 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRCH3Q96II8 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRCH3Q96II8 MAPK10-253ENST00000641010 4072 ntBASIC4.28□□□□□ -1.72
LRCH3Q96II8 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRCH3Q96II8 RNU1-15P-201ENST00000353977 144 ntBASIC4.27□□□□□ -1.73
LRCH3Q96II8 SNORA60-201ENST00000362396 134 ntBASIC4.27□□□□□ -1.73
LRCH3Q96II8 MIR513A2-201ENST00000385249 127 ntBASIC4.27□□□□□ -1.73
LRCH3Q96II8 AC005326.1-201ENST00000429197 123 ntBASIC4.27□□□□□ -1.73
LRCH3Q96II8 SCGB1D5P-201ENST00000515134 247 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms