Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 MIR5002-201ENST00000584713 97 ntBASIC2.27□□□□□ -2.05
RTP4Q96DX8 RPL30P11-203ENST00000598995 310 ntBASIC2.27□□□□□ -2.05
RTP4Q96DX8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.27□□□□□ -2.05
RTP4Q96DX8 FO624990.1-201ENST00000636373 85 ntBASIC2.27□□□□□ -2.05
RTP4Q96DX8 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RTP4Q96DX8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.27□□□□□ -2.05
RTP4Q96DX8 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
RTP4Q96DX8 AL391987.6-201ENST00000305671 199 ntBASIC2.26□□□□□ -2.05
RTP4Q96DX8 RNU6-486P-201ENST00000363116 107 ntBASIC2.26□□□□□ -2.05
RTP4Q96DX8 RNU4-56P-201ENST00000364700 142 ntBASIC2.26□□□□□ -2.05
RTP4Q96DX8 SNORD87-201ENST00000364849 89 ntBASIC2.26□□□□□ -2.05
RTP4Q96DX8 Y_RNA.415-201ENST00000384012 112 ntBASIC2.26□□□□□ -2.05
RTP4Q96DX8 SNORD63-201ENST00000384262 68 ntBASIC2.26□□□□□ -2.05
RTP4Q96DX8 Y_RNA.570-201ENST00000384750 101 ntBASIC2.26□□□□□ -2.05
RTP4Q96DX8 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
RTP4Q96DX8 Y_RNA.595-201ENST00000410403 105 ntBASIC2.26□□□□□ -2.05
RTP4Q96DX8 RNA5SP504-201ENST00000410676 117 ntBASIC2.26□□□□□ -2.05
RTP4Q96DX8 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.26□□□□□ -2.05
RTP4Q96DX8 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.26□□□□□ -2.05
RTP4Q96DX8 AL445687.1-201ENST00000439946 251 ntBASIC2.26□□□□□ -2.05
RTP4Q96DX8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.26□□□□□ -2.05
RTP4Q96DX8 AC004386.2-201ENST00000441858 148 ntBASIC2.26□□□□□ -2.05
RTP4Q96DX8 AC140059.1-201ENST00000489238 361 ntBASIC2.26□□□□□ -2.05
RTP4Q96DX8 RNU6-111P-201ENST00000517179 105 ntBASIC2.26□□□□□ -2.05
RTP4Q96DX8 EIF4A1P12-201ENST00000551910 141 ntBASIC2.26□□□□□ -2.05
RTP4Q96DX8 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.26□□□□□ -2.05
RTP4Q96DX8 MIR1273D-201ENST00000577266 86 ntBASIC2.26□□□□□ -2.05
RTP4Q96DX8 MIR3199-1-201ENST00000582434 88 ntBASIC2.26□□□□□ -2.05
RTP4Q96DX8 MIR7157-201ENST00000635801 60 ntBASIC2.26□□□□□ -2.05
RTP4Q96DX8 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.25□□□□□ -2.05
RTP4Q96DX8 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RTP4Q96DX8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.25□□□□□ -2.05
RTP4Q96DX8 Y_RNA.101-201ENST00000363154 102 ntBASIC2.25□□□□□ -2.05
RTP4Q96DX8 U3.9-201ENST00000363823 204 ntBASIC2.25□□□□□ -2.05
RTP4Q96DX8 SNORD27-201ENST00000363981 72 ntBASIC2.25□□□□□ -2.05
RTP4Q96DX8 Y_RNA.257-201ENST00000364596 102 ntBASIC2.25□□□□□ -2.05
RTP4Q96DX8 RNU6-1175P-201ENST00000365200 107 ntBASIC2.25□□□□□ -2.05
RTP4Q96DX8 RNU6-793P-201ENST00000384233 104 ntBASIC2.25□□□□□ -2.05
RTP4Q96DX8 Y_RNA.489-201ENST00000384410 101 ntBASIC2.25□□□□□ -2.05
RTP4Q96DX8 MIR221-201ENST00000385135 110 ntBASIC2.25□□□□□ -2.05
RTP4Q96DX8 AL603910.2-201ENST00000407268 136 ntBASIC2.25□□□□□ -2.05
RTP4Q96DX8 RPL19P1-201ENST00000411635 428 ntBASIC2.25□□□□□ -2.05
RTP4Q96DX8 AC096920.1-201ENST00000423991 241 ntBASIC2.25□□□□□ -2.05
RTP4Q96DX8 RPL30P4-201ENST00000429309 333 ntBASIC2.25□□□□□ -2.05
RTP4Q96DX8 IFNA11P-201ENST00000446352 526 ntBASIC2.25□□□□□ -2.05
RTP4Q96DX8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.25□□□□□ -2.05
RTP4Q96DX8 RNU6-1023P-201ENST00000516137 106 ntBASIC2.25□□□□□ -2.05
RTP4Q96DX8 HSPE1P18-201ENST00000517602 280 ntBASIC2.25□□□□□ -2.05
RTP4Q96DX8 AC018448.1-201ENST00000552843 316 ntBASIC2.25□□□□□ -2.05
RTP4Q96DX8 AC233702.2-202ENST00000562547 291 ntBASIC2.25□□□□□ -2.05
RTP4Q96DX8 MIR4643-201ENST00000577473 78 ntBASIC2.25□□□□□ -2.05
RTP4Q96DX8 AL356280.1-201ENST00000603614 379 ntBASIC2.25□□□□□ -2.05
RTP4Q96DX8 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
RTP4Q96DX8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.24□□□□□ -2.05
RTP4Q96DX8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
RTP4Q96DX8 SNORD81.1-201ENST00000363064 77 ntBASIC2.24□□□□□ -2.05
RTP4Q96DX8 RNU6-944P-201ENST00000364023 107 ntBASIC2.24□□□□□ -2.05
RTP4Q96DX8 SNORD56.5-201ENST00000364281 72 ntBASIC2.24□□□□□ -2.05
RTP4Q96DX8 RNU1-91P-201ENST00000364746 163 ntBASIC2.24□□□□□ -2.05
RTP4Q96DX8 Y_RNA.446-201ENST00000384178 104 ntBASIC2.24□□□□□ -2.05
RTP4Q96DX8 Y_RNA.462-201ENST00000384268 102 ntBASIC2.24□□□□□ -2.05
RTP4Q96DX8 AL033519.2-201ENST00000403958 392 ntBASIC2.24□□□□□ -2.05
RTP4Q96DX8 U6atac.2-201ENST00000408644 118 ntBASIC2.24□□□□□ -2.05
RTP4Q96DX8 RNU2-14P-201ENST00000411053 191 ntBASIC2.24□□□□□ -2.05
RTP4Q96DX8 RNU6-847P-201ENST00000411115 108 ntBASIC2.24□□□□□ -2.05
RTP4Q96DX8 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.24□□□□□ -2.05
RTP4Q96DX8 UQCRBP2-201ENST00000447827 297 ntBASIC2.24□□□□□ -2.05
RTP4Q96DX8 AC007395.1-201ENST00000451333 677 ntBASIC2.24□□□□□ -2.05
RTP4Q96DX8 AC090515.1-201ENST00000465295 476 ntBASIC2.24□□□□□ -2.05
RTP4Q96DX8 AC023141.11-201ENST00000508864 202 ntBASIC2.24□□□□□ -2.05
RTP4Q96DX8 MIR449C-201ENST00000516047 92 ntBASIC2.24□□□□□ -2.05
RTP4Q96DX8 RNU7-110P-201ENST00000516891 62 ntBASIC2.24□□□□□ -2.05
RTP4Q96DX8 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.24□□□□□ -2.05
RTP4Q96DX8 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.24□□□□□ -2.05
RTP4Q96DX8 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.24□□□□□ -2.05
RTP4Q96DX8 MIR3616-201ENST00000584070 92 ntBASIC2.24□□□□□ -2.05
RTP4Q96DX8 AC005562.2-201ENST00000618264 111 ntBASIC2.24□□□□□ -2.05
RTP4Q96DX8 AC127459.3-201ENST00000624328 466 ntBASIC2.24□□□□□ -2.05
RTP4Q96DX8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.24□□□□□ -2.05
RTP4Q96DX8 U6.104-201ENST00000637979 90 ntBASIC2.24□□□□□ -2.05
RTP4Q96DX8 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RTP4Q96DX8 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RTP4Q96DX8 MIR335-201ENST00000362173 94 ntBASIC2.23□□□□□ -2.05
RTP4Q96DX8 SNORD32B-201ENST00000364460 84 ntBASIC2.23□□□□□ -2.05
RTP4Q96DX8 Y_RNA.277-201ENST00000364754 102 ntBASIC2.23□□□□□ -2.05
RTP4Q96DX8 SNORA20.1-201ENST00000364790 130 ntBASIC2.23□□□□□ -2.05
RTP4Q96DX8 RNU6-290P-201ENST00000365212 101 ntBASIC2.23□□□□□ -2.05
RTP4Q96DX8 RNU6-245P-201ENST00000384020 107 ntBASIC2.23□□□□□ -2.05
RTP4Q96DX8 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.23□□□□□ -2.05
RTP4Q96DX8 RAB28P5-201ENST00000427490 651 ntBASIC2.23□□□□□ -2.05
RTP4Q96DX8 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.23□□□□□ -2.05
RTP4Q96DX8 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.23□□□□□ -2.05
RTP4Q96DX8 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RTP4Q96DX8 RNU6-625P-201ENST00000459412 107 ntBASIC2.23□□□□□ -2.05
RTP4Q96DX8 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.23□□□□□ -2.05
RTP4Q96DX8 SCARNA16.3-201ENST00000516595 184 ntBASIC2.23□□□□□ -2.05
RTP4Q96DX8 RNU2-44P-201ENST00000516795 194 ntBASIC2.23□□□□□ -2.05
RTP4Q96DX8 RN7SKP40-201ENST00000517211 242 ntBASIC2.23□□□□□ -2.05
RTP4Q96DX8 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RTP4Q96DX8 AL713866.2-201ENST00000603579 219 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms