Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC107393.1-201ENST00000512403 346 ntBASIC1.9□□□□□ -2.11
SKA1Q96BD8 Y_RNA.670-201ENST00000516255 105 ntBASIC1.9□□□□□ -2.11
SKA1Q96BD8 APOOP3-201ENST00000536787 586 ntBASIC1.9□□□□□ -2.11
SKA1Q96BD8 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.9□□□□□ -2.11
SKA1Q96BD8 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.9□□□□□ -2.11
SKA1Q96BD8 AC093023.1-201ENST00000547375 507 ntBASIC1.9□□□□□ -2.11
SKA1Q96BD8 AC022432.1-201ENST00000595739 310 ntBASIC1.9□□□□□ -2.11
SKA1Q96BD8 MZT1P2-201ENST00000604387 248 ntBASIC1.9□□□□□ -2.11
SKA1Q96BD8 AC009229.3-201ENST00000608056 282 ntBASIC1.9□□□□□ -2.11
SKA1Q96BD8 uc_338.5-201ENST00000611839 155 ntBASIC1.9□□□□□ -2.11
SKA1Q96BD8 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.9□□□□□ -2.11
SKA1Q96BD8 AC099654.5-201ENST00000636479 350 ntBASIC1.9□□□□□ -2.11
SKA1Q96BD8 MTND5P16-201ENST00000460269 1703 ntBASIC1.9□□□□□ -2.11
SKA1Q96BD8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SKA1Q96BD8 RNY1P16-201ENST00000363063 111 ntBASIC1.89□□□□□ -2.11
SKA1Q96BD8 SNORA33-201ENST00000363664 130 ntBASIC1.89□□□□□ -2.11
SKA1Q96BD8 Y_RNA.160-201ENST00000363677 92 ntBASIC1.89□□□□□ -2.11
SKA1Q96BD8 Y_RNA.248-201ENST00000364501 109 ntBASIC1.89□□□□□ -2.11
SKA1Q96BD8 RNU4-42P-201ENST00000364738 142 ntBASIC1.89□□□□□ -2.11
SKA1Q96BD8 Y_RNA.339-201ENST00000365325 102 ntBASIC1.89□□□□□ -2.11
SKA1Q96BD8 RNU6-281P-201ENST00000384212 103 ntBASIC1.89□□□□□ -2.11
SKA1Q96BD8 Y_RNA.473-201ENST00000384333 102 ntBASIC1.89□□□□□ -2.11
SKA1Q96BD8 RNU6-950P-201ENST00000384651 107 ntBASIC1.89□□□□□ -2.11
SKA1Q96BD8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.89□□□□□ -2.11
SKA1Q96BD8 SNORA25.15-201ENST00000516487 89 ntBASIC1.89□□□□□ -2.11
SKA1Q96BD8 RNU6-107P-201ENST00000516643 102 ntBASIC1.89□□□□□ -2.11
SKA1Q96BD8 AL137100.2-201ENST00000555786 315 ntBASIC1.89□□□□□ -2.11
SKA1Q96BD8 MIR4709-201ENST00000577272 72 ntBASIC1.89□□□□□ -2.11
SKA1Q96BD8 SNORA77B-201ENST00000578179 125 ntBASIC1.89□□□□□ -2.11
SKA1Q96BD8 AC005014.2-201ENST00000607795 599 ntBASIC1.89□□□□□ -2.11
SKA1Q96BD8 AC122108.2-201ENST00000611946 526 ntBASIC1.89□□□□□ -2.11
SKA1Q96BD8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.89□□□□□ -2.11
SKA1Q96BD8 WWP1P1-201ENST00000466609 2769 ntBASIC1.88□□□□□ -2.11
SKA1Q96BD8 ICE2P2-201ENST00000483823 2787 ntBASIC1.88□□□□□ -2.11
SKA1Q96BD8 RNU6-222P-201ENST00000362438 107 ntBASIC1.88□□□□□ -2.11
SKA1Q96BD8 Y_RNA.88-201ENST00000363029 99 ntBASIC1.88□□□□□ -2.11
SKA1Q96BD8 Y_RNA.364-201ENST00000365532 101 ntBASIC1.88□□□□□ -2.11
SKA1Q96BD8 RNU6-876P-201ENST00000391295 104 ntBASIC1.88□□□□□ -2.11
SKA1Q96BD8 Y_RNA.599-201ENST00000410489 109 ntBASIC1.88□□□□□ -2.11
SKA1Q96BD8 MTND4P18-201ENST00000447010 465 ntBASIC1.88□□□□□ -2.11
SKA1Q96BD8 RNU7-87P-201ENST00000459343 62 ntBASIC1.88□□□□□ -2.11
SKA1Q96BD8 HMGN1P12-201ENST00000499125 195 ntBASIC1.88□□□□□ -2.11
SKA1Q96BD8 AC108729.3-201ENST00000513484 108 ntBASIC1.88□□□□□ -2.11
SKA1Q96BD8 Y_RNA.676-201ENST00000516393 96 ntBASIC1.88□□□□□ -2.11
SKA1Q96BD8 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.88□□□□□ -2.11
SKA1Q96BD8 AK6P2-201ENST00000549020 471 ntBASIC1.88□□□□□ -2.11
SKA1Q96BD8 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.88□□□□□ -2.11
SKA1Q96BD8 SNRPGP19-201ENST00000603826 189 ntBASIC1.88□□□□□ -2.11
SKA1Q96BD8 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.88□□□□□ -2.11
SKA1Q96BD8 MIR8063-201ENST00000621930 81 ntBASIC1.88□□□□□ -2.11
SKA1Q96BD8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SKA1Q96BD8 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SKA1Q96BD8 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SKA1Q96BD8 RNU6-845P-201ENST00000362578 103 ntBASIC1.87□□□□□ -2.11
SKA1Q96BD8 Y_RNA.166-201ENST00000363730 102 ntBASIC1.87□□□□□ -2.11
SKA1Q96BD8 RNU1-78P-201ENST00000391248 165 ntBASIC1.87□□□□□ -2.11
SKA1Q96BD8 Y_RNA.595-201ENST00000410403 105 ntBASIC1.87□□□□□ -2.11
SKA1Q96BD8 CYCSP49-201ENST00000420810 319 ntBASIC1.87□□□□□ -2.11
SKA1Q96BD8 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.87□□□□□ -2.11
SKA1Q96BD8 TOMM22P2-201ENST00000430735 237 ntBASIC1.87□□□□□ -2.11
SKA1Q96BD8 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.87□□□□□ -2.11
SKA1Q96BD8 AL353997.1-201ENST00000432936 108 ntBASIC1.87□□□□□ -2.11
SKA1Q96BD8 RPL23AP50-201ENST00000434149 455 ntBASIC1.87□□□□□ -2.11
SKA1Q96BD8 MTND3P10-201ENST00000450967 341 ntBASIC1.87□□□□□ -2.11
SKA1Q96BD8 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.87□□□□□ -2.11
SKA1Q96BD8 AC116353.2-201ENST00000505332 712 ntBASIC1.87□□□□□ -2.11
SKA1Q96BD8 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.87□□□□□ -2.11
SKA1Q96BD8 AC105029.1-201ENST00000520250 669 ntBASIC1.87□□□□□ -2.11
SKA1Q96BD8 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
SKA1Q96BD8 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SKA1Q96BD8 SNORD33-201ENST00000362761 85 ntBASIC1.86□□□□□ -2.11
SKA1Q96BD8 Y_RNA.279-201ENST00000364763 95 ntBASIC1.86□□□□□ -2.11
SKA1Q96BD8 MTND1P2-201ENST00000430604 821 ntBASIC1.86□□□□□ -2.11
SKA1Q96BD8 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.86□□□□□ -2.11
SKA1Q96BD8 AL163195.1-201ENST00000496941 348 ntBASIC1.86□□□□□ -2.11
SKA1Q96BD8 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.86□□□□□ -2.11
SKA1Q96BD8 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.86□□□□□ -2.11
SKA1Q96BD8 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.86□□□□□ -2.11
SKA1Q96BD8 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
SKA1Q96BD8 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.86□□□□□ -2.11
SKA1Q96BD8 SNORD48-201ENST00000364953 64 ntBASIC1.85□□□□□ -2.11
SKA1Q96BD8 RPS20P15-201ENST00000412792 311 ntBASIC1.85□□□□□ -2.11
SKA1Q96BD8 RNU7-34P-201ENST00000459394 64 ntBASIC1.85□□□□□ -2.11
SKA1Q96BD8 RPL31P58-201ENST00000469001 379 ntBASIC1.85□□□□□ -2.11
SKA1Q96BD8 RPL7P42-201ENST00000481005 679 ntBASIC1.85□□□□□ -2.11
SKA1Q96BD8 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.85□□□□□ -2.11
SKA1Q96BD8 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.85□□□□□ -2.11
SKA1Q96BD8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.85□□□□□ -2.11
SKA1Q96BD8 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.85□□□□□ -2.11
SKA1Q96BD8 RNU6-271P-201ENST00000363858 105 ntBASIC1.84□□□□□ -2.11
SKA1Q96BD8 RNU6-331P-201ENST00000384724 107 ntBASIC1.84□□□□□ -2.11
SKA1Q96BD8 MT-TL1-201ENST00000386347 75 ntBASIC1.84□□□□□ -2.11
SKA1Q96BD8 RNU6-1186P-201ENST00000410429 97 ntBASIC1.84□□□□□ -2.11
SKA1Q96BD8 RPL23AP36-201ENST00000413895 458 ntBASIC1.84□□□□□ -2.11
SKA1Q96BD8 EIF1P2-201ENST00000428233 350 ntBASIC1.84□□□□□ -2.11
SKA1Q96BD8 UQCRBP2-201ENST00000447827 297 ntBASIC1.84□□□□□ -2.11
SKA1Q96BD8 AC245517.4-201ENST00000448601 281 ntBASIC1.84□□□□□ -2.11
SKA1Q96BD8 Y_RNA.635-201ENST00000459041 101 ntBASIC1.84□□□□□ -2.11
SKA1Q96BD8 AC091144.1-201ENST00000519573 138 ntBASIC1.84□□□□□ -2.11
SKA1Q96BD8 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms