| CLUAP1 | Q96AJ1 | AC091021.1-201 | ENST00000468051 | 388 nt | BASIC | 4.04 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | RPS27AP9-201 | ENST00000477681 | 438 nt | BASIC | 4.04 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | AC074198.2-201 | ENST00000508153 | 258 nt | BASIC | 4.04 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | AC008852.1-201 | ENST00000510198 | 451 nt | TSL 2 BASIC | 4.04 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | NCRNA00250-201 | ENST00000519500 | 519 nt | TSL 4 BASIC | 4.04 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | AC245166.1-201 | ENST00000521012 | 253 nt | BASIC | 4.04 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | AC134026.1-201 | ENST00000623249 | 2239 nt | BASIC | 4.04 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | CFH-202 | ENST00000367429 | 4127 nt | APPRIS P1 TSL 1 (best) BASIC | 4.04 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | CUL3-204 | ENST00000409777 | 3147 nt | TSL 1 (best) BASIC | 4.04 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | TMPRSS11A-201 | ENST00000334830 | 3054 nt | APPRIS P3 TSL 2 BASIC | 4.04 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | PHTF2-202 | ENST00000275575 | 4541 nt | TSL 1 (best) BASIC | 4.04 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | POSTN-209 | ENST00000541179 | 3214 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.04 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | CASP1-201 | ENST00000353247 | 423 nt | TSL 1 (best) BASIC | 4.03 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.124-201 | ENST00000363339 | 93 nt | BASIC | 4.03 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | RNU6-1135P-201 | ENST00000411083 | 103 nt | BASIC | 4.03 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | AC008948.1-201 | ENST00000506058 | 325 nt | TSL 2 BASIC | 4.03 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | RNU6-255P-201 | ENST00000516957 | 105 nt | BASIC | 4.03 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | AC021269.2-201 | ENST00000532318 | 330 nt | BASIC | 4.03 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | AC005972.2-201 | ENST00000604690 | 348 nt | BASIC | 4.03 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | MIR548AY-201 | ENST00000617669 | 107 nt | BASIC | 4.03 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | U4atac.1-201 | ENST00000618345 | 95 nt | BASIC | 4.03 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | CC2D2B-210 | ENST00000636965 | 3247 nt | TSL 5 BASIC | 4.03 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | KIAA0586-215 | ENST00000619722 | 5597 nt | APPRIS ALT2 TSL 2 BASIC | 4.03 | □□□□□ -1.76 | | |
| CLUAP1 | Q96AJ1 | PMS1-215 | ENST00000447232 | 2576 nt | TSL 2 BASIC | 4.03 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | SKIL-203 | ENST00000426052 | 2757 nt | TSL 2 BASIC | 4.02 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AC073346.2-201 | ENST00000624724 | 2058 nt | BASIC | 4.02 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RNU6-394P-201 | ENST00000410735 | 107 nt | BASIC | 4.02 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RNA5SP120-201 | ENST00000410900 | 112 nt | BASIC | 4.02 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AL365277.2-201 | ENST00000415255 | 551 nt | TSL 3 BASIC | 4.02 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | MAGEA8-AS1-201 | ENST00000427671 | 476 nt | TSL 3 BASIC | 4.02 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AC055733.2-201 | ENST00000504737 | 340 nt | TSL 2 BASIC | 4.02 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RNU6-1146P-201 | ENST00000516282 | 102 nt | BASIC | 4.02 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RNU7-115P-201 | ENST00000516433 | 55 nt | BASIC | 4.02 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RNU6-856P-201 | ENST00000516959 | 98 nt | BASIC | 4.02 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AC092138.2-201 | ENST00000563811 | 428 nt | TSL 5 BASIC | 4.02 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | MIR3117-201 | ENST00000584034 | 78 nt | BASIC | 4.02 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AP003357.1-201 | ENST00000604497 | 148 nt | BASIC | 4.02 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AL357054.2-201 | ENST00000607644 | 423 nt | TSL 5 BASIC | 4.02 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AC027045.1-201 | ENST00000609065 | 202 nt | TSL 5 BASIC | 4.02 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | SLC8A1-207 | ENST00000406785 | 20987 nt | TSL 1 (best) BASIC | 4.02 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AC093725.1-201 | ENST00000508135 | 2672 nt | TSL 5 BASIC | 4.01 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | NOC3L-201 | ENST00000371361 | 3455 nt | APPRIS P1 TSL 1 (best) BASIC | 4.01 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RNU11-5P-201 | ENST00000391216 | 129 nt | BASIC | 4.01 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | SNORA48.8-201 | ENST00000391324 | 134 nt | BASIC | 4.01 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RNU2-48P-201 | ENST00000410694 | 191 nt | BASIC | 4.01 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | SRIP3-201 | ENST00000413200 | 219 nt | BASIC | 4.01 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | MIR5047-201 | ENST00000579212 | 100 nt | BASIC | 4.01 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | MIR4724-201 | ENST00000579485 | 89 nt | BASIC | 4.01 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | UBL5P2-201 | ENST00000583788 | 219 nt | BASIC | 4.01 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AC068647.2-201 | ENST00000637380 | 353 nt | BASIC | 4.01 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | TDRD15-201 | ENST00000405799 | 6135 nt | APPRIS P1 TSL 2 BASIC | 4.01 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RNU6-1048P-201 | ENST00000364054 | 107 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | SNORA46-201 | ENST00000384762 | 135 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | MIR627-201 | ENST00000384979 | 97 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RNU2-2P-201 | ENST00000410396 | 191 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RN7SKP51-201 | ENST00000410781 | 304 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AL353705.1-201 | ENST00000433468 | 480 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RN7SL863P-201 | ENST00000462370 | 296 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RN7SL504P-201 | ENST00000494496 | 287 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AC097501.2-201 | ENST00000502668 | 305 nt | TSL 5 BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | NDUFA5P6-201 | ENST00000542110 | 379 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | PRELID2P1-201 | ENST00000552837 | 301 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | MIR5680-201 | ENST00000577577 | 84 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | MIR4744-201 | ENST00000581563 | 82 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RNU2-4P-201 | ENST00000606190 | 192 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | U2.15-201 | ENST00000611544 | 191 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AL391903.3-201 | ENST00000612158 | 163 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | U2.16-201 | ENST00000613119 | 191 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | U2.12-201 | ENST00000613778 | 191 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | U2.9-201 | ENST00000615427 | 191 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | U2.11-201 | ENST00000616345 | 191 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | U2.2-201 | ENST00000616535 | 191 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | U2.3-201 | ENST00000617785 | 191 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | U2.19-201 | ENST00000618602 | 191 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RNU2-1-201 | ENST00000618664 | 191 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | U2.6-201 | ENST00000619225 | 191 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | U2.5-201 | ENST00000619465 | 191 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | U2.10-201 | ENST00000620268 | 191 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | 5S_rRNA.13-201 | ENST00000622298 | 123 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AL021368.2-201 | ENST00000606125 | 5352 nt | BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | SAMD9-201 | ENST00000379958 | 6852 nt | APPRIS P1 TSL 1 (best) BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | UBA5-201 | ENST00000264991 | 2850 nt | TSL 5 BASIC | 4 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.182-201 | ENST00000363880 | 111 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RNU6-743P-201 | ENST00000364151 | 106 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RNU6-275P-201 | ENST00000364910 | 107 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | SNORD67-201 | ENST00000390833 | 111 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RPL21P3-201 | ENST00000395517 | 478 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | EBAG9P1-201 | ENST00000418955 | 543 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | BX510359.1-201 | ENST00000456973 | 237 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AP001486.1-201 | ENST00000463339 | 476 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AC091826.1-201 | ENST00000514065 | 313 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.797-201 | ENST00000515977 | 94 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | RNU6-406P-201 | ENST00000516470 | 107 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | MIR3144-201 | ENST00000579460 | 79 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | AC004832.4-201 | ENST00000608952 | 331 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | MTND1P7-201 | ENST00000632801 | 297 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | EVI2B-201 | ENST00000330927 | 1999 nt | APPRIS P1 TSL 1 (best) BASIC | 3.99 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | MIR367-201 | ENST00000362299 | 68 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.357-201 | ENST00000365487 | 109 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| CLUAP1 | Q96AJ1 | MIR616-201 | ENST00000385293 | 97 nt | BASIC | 3.98 | □□□□□ -1.77 | | |