Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MIR5695-201ENST00000579717 85 ntBASIC1.38□□□□□ -2.19
PTP4A1Q93096 AL365434.2-201ENST00000607979 234 ntBASIC1.38□□□□□ -2.19
PTP4A1Q93096 MIR6128-201ENST00000615528 109 ntBASIC1.38□□□□□ -2.19
PTP4A1Q93096 MIR8054-201ENST00000620877 86 ntBASIC1.38□□□□□ -2.19
PTP4A1Q93096 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
PTP4A1Q93096 RNA5SP190-201ENST00000365222 118 ntBASIC1.37□□□□□ -2.19
PTP4A1Q93096 MIR10B-201ENST00000385011 110 ntBASIC1.37□□□□□ -2.19
PTP4A1Q93096 AL591806.2-201ENST00000433122 173 ntBASIC1.37□□□□□ -2.19
PTP4A1Q93096 RPS27P1-201ENST00000450552 247 ntBASIC1.37□□□□□ -2.19
PTP4A1Q93096 AC023790.1-201ENST00000482174 347 ntBASIC1.37□□□□□ -2.19
PTP4A1Q93096 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.37□□□□□ -2.19
PTP4A1Q93096 AL512310.8-201ENST00000550183 120 ntBASIC1.37□□□□□ -2.19
PTP4A1Q93096 MIR4742-201ENST00000581069 85 ntBASIC1.37□□□□□ -2.19
PTP4A1Q93096 SNORA28-201ENST00000606769 126 ntBASIC1.37□□□□□ -2.19
PTP4A1Q93096 AC021506.2-201ENST00000612354 169 ntBASIC1.37□□□□□ -2.19
PTP4A1Q93096 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.37□□□□□ -2.19
PTP4A1Q93096 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
PTP4A1Q93096 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
PTP4A1Q93096 RNU6-831P-201ENST00000384548 107 ntBASIC1.36□□□□□ -2.19
PTP4A1Q93096 MIR562-201ENST00000384894 95 ntBASIC1.36□□□□□ -2.19
PTP4A1Q93096 MIR150-201ENST00000385048 84 ntBASIC1.36□□□□□ -2.19
PTP4A1Q93096 RNU6-510P-201ENST00000391239 108 ntBASIC1.36□□□□□ -2.19
PTP4A1Q93096 MIR1304-201ENST00000408243 91 ntBASIC1.36□□□□□ -2.19
PTP4A1Q93096 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
PTP4A1Q93096 MTND1P17-201ENST00000448961 204 ntBASIC1.36□□□□□ -2.19
PTP4A1Q93096 RN7SKP88-201ENST00000516847 250 ntBASIC1.36□□□□□ -2.19
PTP4A1Q93096 AC019288.1-201ENST00000557918 224 ntBASIC1.36□□□□□ -2.19
PTP4A1Q93096 AC090617.3-201ENST00000573670 475 ntBASIC1.36□□□□□ -2.19
PTP4A1Q93096 MIR4790-201ENST00000577799 79 ntBASIC1.36□□□□□ -2.19
PTP4A1Q93096 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.36□□□□□ -2.19
PTP4A1Q93096 MIR4298-201ENST00000584380 73 ntBASIC1.36□□□□□ -2.19
PTP4A1Q93096 7SK.8-201ENST00000612110 250 ntBASIC1.36□□□□□ -2.19
PTP4A1Q93096 7SK.11-201ENST00000615477 250 ntBASIC1.36□□□□□ -2.19
PTP4A1Q93096 7SK.13-201ENST00000622040 250 ntBASIC1.36□□□□□ -2.19
PTP4A1Q93096 MIR7843-201ENST00000622274 79 ntBASIC1.36□□□□□ -2.19
PTP4A1Q93096 AC099654.5-201ENST00000636479 350 ntBASIC1.36□□□□□ -2.19
PTP4A1Q93096 U6.108-201ENST00000637764 58 ntBASIC1.36□□□□□ -2.19
PTP4A1Q93096 AP000648.3-201ENST00000623539 4507 ntBASIC1.36□□□□□ -2.19
PTP4A1Q93096 RNU6-939P-201ENST00000384634 107 ntBASIC1.35□□□□□ -2.19
PTP4A1Q93096 MIR517C-201ENST00000385103 95 ntBASIC1.35□□□□□ -2.19
PTP4A1Q93096 RNU6-440P-201ENST00000390882 105 ntBASIC1.35□□□□□ -2.19
PTP4A1Q93096 SNORA67.5-201ENST00000391036 107 ntBASIC1.35□□□□□ -2.19
PTP4A1Q93096 RNU1-139P-201ENST00000391307 165 ntBASIC1.35□□□□□ -2.19
PTP4A1Q93096 AL356776.1-201ENST00000406574 447 ntBASIC1.35□□□□□ -2.19
PTP4A1Q93096 AC010154.1-201ENST00000425857 269 ntBASIC1.35□□□□□ -2.19
PTP4A1Q93096 MTND3P23-201ENST00000431980 347 ntBASIC1.35□□□□□ -2.19
PTP4A1Q93096 MTND1P34-201ENST00000438556 671 ntBASIC1.35□□□□□ -2.19
PTP4A1Q93096 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.35□□□□□ -2.19
PTP4A1Q93096 SNORD5.1-201ENST00000458800 75 ntBASIC1.35□□□□□ -2.19
PTP4A1Q93096 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.35□□□□□ -2.19
PTP4A1Q93096 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.35□□□□□ -2.19
PTP4A1Q93096 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.35□□□□□ -2.19
PTP4A1Q93096 AP003033.1-201ENST00000527244 415 ntBASIC1.35□□□□□ -2.19
PTP4A1Q93096 CYP3A52P-201ENST00000563326 91 ntBASIC1.35□□□□□ -2.19
PTP4A1Q93096 SNORD53B-201ENST00000577887 78 ntBASIC1.35□□□□□ -2.19
PTP4A1Q93096 MIR4438-201ENST00000585271 93 ntBASIC1.35□□□□□ -2.19
PTP4A1Q93096 AC022217.4-201ENST00000604389 163 ntBASIC1.35□□□□□ -2.19
PTP4A1Q93096 AL513423.1-201ENST00000621695 132 ntBASIC1.35□□□□□ -2.19
PTP4A1Q93096 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
PTP4A1Q93096 Y_RNA.3-201ENST00000362331 103 ntBASIC1.34□□□□□ -2.19
PTP4A1Q93096 RNU1-42P-201ENST00000364033 160 ntBASIC1.34□□□□□ -2.19
PTP4A1Q93096 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
PTP4A1Q93096 RNU6-700P-201ENST00000391043 107 ntBASIC1.34□□□□□ -2.19
PTP4A1Q93096 Y_RNA.595-201ENST00000410403 105 ntBASIC1.34□□□□□ -2.19
PTP4A1Q93096 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.34□□□□□ -2.19
PTP4A1Q93096 USP9YP30-201ENST00000430729 455 ntBASIC1.34□□□□□ -2.19
PTP4A1Q93096 AC005002.2-201ENST00000438228 269 ntBASIC1.34□□□□□ -2.19
PTP4A1Q93096 UBE2V1P7-201ENST00000446395 340 ntBASIC1.34□□□□□ -2.19
PTP4A1Q93096 MRPS10P1-201ENST00000448483 130 ntBASIC1.34□□□□□ -2.19
PTP4A1Q93096 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.34□□□□□ -2.19
PTP4A1Q93096 snoU13.23-201ENST00000458863 104 ntBASIC1.34□□□□□ -2.19
PTP4A1Q93096 RPS27P22-201ENST00000478056 241 ntBASIC1.34□□□□□ -2.19
PTP4A1Q93096 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.34□□□□□ -2.19
PTP4A1Q93096 AC010598.1-201ENST00000510378 103 ntBASIC1.34□□□□□ -2.19
PTP4A1Q93096 RNU6-1088P-201ENST00000516850 104 ntBASIC1.34□□□□□ -2.19
PTP4A1Q93096 SUMO2P16-201ENST00000519475 264 ntBASIC1.34□□□□□ -2.19
PTP4A1Q93096 RPL21P9-201ENST00000556149 474 ntBASIC1.34□□□□□ -2.19
PTP4A1Q93096 MZT1P2-201ENST00000604387 248 ntBASIC1.34□□□□□ -2.19
PTP4A1Q93096 RNU6-593P-201ENST00000364716 112 ntBASIC1.33□□□□□ -2.2
PTP4A1Q93096 MTCYBP4-201ENST00000401524 249 ntBASIC1.33□□□□□ -2.2
PTP4A1Q93096 RPL37P10-201ENST00000412884 288 ntBASIC1.33□□□□□ -2.2
PTP4A1Q93096 AL606517.2-201ENST00000442855 241 ntBASIC1.33□□□□□ -2.2
PTP4A1Q93096 SNORD65B-201ENST00000459126 73 ntBASIC1.33□□□□□ -2.2
PTP4A1Q93096 RPL39P38-201ENST00000467018 153 ntBASIC1.33□□□□□ -2.2
PTP4A1Q93096 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.33□□□□□ -2.2
PTP4A1Q93096 AC046134.1-201ENST00000514454 666 ntBASIC1.33□□□□□ -2.2
PTP4A1Q93096 AC093023.1-201ENST00000547375 507 ntBASIC1.33□□□□□ -2.2
PTP4A1Q93096 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.33□□□□□ -2.2
PTP4A1Q93096 AK6P2-201ENST00000549020 471 ntBASIC1.33□□□□□ -2.2
PTP4A1Q93096 AC015712.3-201ENST00000559380 164 ntBASIC1.33□□□□□ -2.2
PTP4A1Q93096 MIR3664-201ENST00000579074 99 ntBASIC1.33□□□□□ -2.2
PTP4A1Q93096 BX248123.2-201ENST00000606318 124 ntBASIC1.33□□□□□ -2.2
PTP4A1Q93096 AC073349.3-201ENST00000617616 186 ntBASIC1.33□□□□□ -2.2
PTP4A1Q93096 MIR3688-2-201ENST00000636963 87 ntBASIC1.33□□□□□ -2.2
PTP4A1Q93096 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
PTP4A1Q93096 RNU6-1215P-201ENST00000384441 102 ntBASIC1.32□□□□□ -2.2
PTP4A1Q93096 MIR618-201ENST00000385287 98 ntBASIC1.32□□□□□ -2.2
PTP4A1Q93096 MIR1323-201ENST00000408090 73 ntBASIC1.32□□□□□ -2.2
PTP4A1Q93096 SNORD13-201ENST00000459299 104 ntBASIC1.32□□□□□ -2.2
PTP4A1Q93096 SNORA31.10-201ENST00000516482 106 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms