Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RNU6-873P-201ENST00000363833 107 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 SNORA75.4-201ENST00000391278 119 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 AL356432.1-201ENST00000405809 419 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 AC004866.1-201ENST00000411748 78 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 MTND3P10-201ENST00000450967 341 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 HMGN2P9-201ENST00000476875 229 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 AC006600.1-201ENST00000572529 153 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 AC018462.2-201ENST00000605375 395 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 AC133104.2-201ENST00000615272 193 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 AC130454.1-201ENST00000622948 401 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 CASC19-280ENST00000642102 1351 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 RNU6-1059P-201ENST00000363752 98 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 RNA5SP493-201ENST00000364115 91 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 SNORA16B-201ENST00000364674 135 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 SNORA25B-201ENST00000365507 128 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 RNU6-95P-201ENST00000384697 107 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 RNU6-1304P-201ENST00000411374 106 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 CBX3P6-201ENST00000430257 527 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 AC004584.2-201ENST00000570407 410 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 MIR3198-2-201ENST00000577868 80 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 AC022513.1-201ENST00000624512 117 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 AC068700.1-201ENST00000565862 3754 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 AL161722.3-201ENST00000605789 2983 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 Y_RNA.184-201ENST00000363884 108 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 RNU6-99P-201ENST00000364721 107 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 Y_RNA.450-201ENST00000384198 113 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 Y_RNA.490-201ENST00000384413 102 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 RNU6-831P-201ENST00000384548 107 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 MIR487A-201ENST00000385009 80 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 SNORA12.2-201ENST00000391040 156 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 RPS26P42-201ENST00000413485 326 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 AL358176.2-201ENST00000425769 204 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 AC098614.3-201ENST00000438957 440 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 HSPE1P24-201ENST00000450782 238 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 AC016925.1-201ENST00000458303 298 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 Y_RNA.635-201ENST00000459041 101 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 HAR1A.1-201ENST00000459583 118 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 AC010531.2-201ENST00000465012 153 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 RPL7P42-201ENST00000481005 679 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 AC010409.1-201ENST00000487382 476 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 AC018868.1-201ENST00000491307 315 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 AC145146.1-201ENST00000496370 254 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 AC022447.4-201ENST00000504053 364 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 DEFB131C-201ENST00000528817 165 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 PCGEM1.1-201ENST00000613431 131 ntBASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
SHROOM3Q8TF72 MIR126-201ENST00000362291 85 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 Y_RNA.115-201ENST00000363272 98 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 Y_RNA.146-201ENST00000363549 102 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 SNORA72.2-201ENST00000365028 127 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 RNU6-17P-201ENST00000384245 107 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 RNU6-18P-201ENST00000384527 107 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 USP9YP28-201ENST00000435142 589 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 snoU13.6-201ENST00000458785 104 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 AC026782.1-201ENST00000512952 449 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 Y_RNA.706-201ENST00000516933 99 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 7SK.7-201ENST00000603504 247 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 MZT1P2-201ENST00000604387 248 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 AC022306.2-201ENST00000617563 647 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 AC112487.2-201ENST00000637950 304 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 RNU4-73P-201ENST00000363164 141 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 RNA5SP494-201ENST00000410653 129 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 AC012306.1-201ENST00000423267 114 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 AC093019.1-201ENST00000443135 252 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 AC009237.7-201ENST00000447357 229 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 MTND5P20-201ENST00000448677 143 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 AC107399.1-201ENST00000451226 265 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 AC027575.1-201ENST00000481064 460 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 SCARNA16.2-201ENST00000516520 172 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 RNU6-1098P-201ENST00000516772 96 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 RNA5SP54-201ENST00000516951 92 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 AL590705.4-201ENST00000532209 134 ntBASIC1.05□□□□□ -2.24
SHROOM3Q8TF72 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms