Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC112187.2-201ENST00000604345 283 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.07□□□□□ -2.4
SYNE1Q8NF91 7SK.10-201ENST00000621414 298 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC006927.3-201ENST00000638789 384 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 MIR1-2-201ENST00000384961 85 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC114482.1-201ENST00000418010 247 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC010154.1-201ENST00000425857 269 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 RNU7-56P-201ENST00000458744 62 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC116353.2-201ENST00000505332 712 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 HMGB1P29-201ENST00000505659 499 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 RNU6-863P-201ENST00000515989 104 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 BX284668.6-201ENST00000606899 438 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
SYNE1Q8NF91 RNU6-137P-201ENST00000363680 108 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 RNY1P8-201ENST00000383970 114 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 RNU6-1186P-201ENST00000410429 97 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 RNU6-177P-201ENST00000411257 104 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.06□□□□□ -2.4
SYNE1Q8NF91 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.06□□□□□ -2.4
SYNE1Q8NF91 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC091178.2-201ENST00000584401 117 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 DEFB131E-202ENST00000602581 683 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC027807.2-201ENST00000616099 408 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC073349.3-201ENST00000617616 186 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.06□□□□□ -2.4
SYNE1Q8NF91 SNORD118-201ENST00000363593 134 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
SYNE1Q8NF91 RNY3P9-201ENST00000384727 106 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 SNORD105-201ENST00000386910 85 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 RNA5SP323-201ENST00000391094 133 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.06□□□□□ -2.4
SYNE1Q8NF91 MTCO2P21-201ENST00000419780 677 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.06□□□□□ -2.4
SYNE1Q8NF91 snoU13.27-201ENST00000459278 104 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 RAP1BP2-201ENST00000478270 544 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.06□□□□□ -2.4
SYNE1Q8NF91 ELOCP32-201ENST00000548625 324 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 MIR4307-201ENST00000582802 84 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AL139286.2-201ENST00000606838 396 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC008873.1-201ENST00000625051 138 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 U3.9-201ENST00000363823 204 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 Y_RNA.352-201ENST00000365439 102 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC091021.1-201ENST00000468051 388 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC005178.1-201ENST00000508392 440 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 RNU2-69P-201ENST00000516061 100 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AP001506.1-201ENST00000615444 211 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC007014.2-201ENST00000615581 479 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 SCARNA4-201ENST00000629045 128 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 OR5AK4P-201ENST00000635912 903 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC068137.4-201ENST00000638485 296 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
SYNE1Q8NF91 RNU6-112P-201ENST00000363599 104 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 RNU6-393P-201ENST00000384475 107 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.06□□□□□ -2.4
SYNE1Q8NF91 MTND3P25-201ENST00000509243 135 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 RNU6-1291P-201ENST00000516591 104 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 SCARNA16.5-201ENST00000517114 183 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 CENPUP1-201ENST00000526649 1202 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AP003181.2-201ENST00000528941 181 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.06□□□□□ -2.4
SYNE1Q8NF91 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 MTCYBP4-201ENST00000401524 249 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 Y_RNA.608-201ENST00000410647 95 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC078809.1-201ENST00000427601 140 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.06□□□□□ -2.4
SYNE1Q8NF91 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC010493.1-201ENST00000513479 292 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 RNU6-1178P-201ENST00000516674 107 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 MTCO2P4-201ENST00000517968 247 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 MTND2P7-201ENST00000521337 640 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC022616.3-201ENST00000523940 148 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC022878.1-201ENST00000530684 149 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 MTCO3P23-201ENST00000561363 289 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC005771.1-201ENST00000585581 349 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC078795.3-201ENST00000602913 472 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 Z99497.2-201ENST00000603634 310 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC022217.4-201ENST00000604389 163 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 RNU6-1266P-201ENST00000362794 105 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 CETN4P-201ENST00000432407 469 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC022364.2-201ENST00000457963 554 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 snoU13.30-201ENST00000458951 104 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 SNRPGP7-201ENST00000469016 106 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.06□□□□□ -2.4
SYNE1Q8NF91 SCARNA8-201ENST00000515924 131 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 Z98751.3-201ENST00000604447 521 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 MIR103A2-201ENST00000362154 78 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 MRPS18CP6-201ENST00000423587 223 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AL356010.1-201ENST00000456364 102 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 snoU109.3-201ENST00000459477 145 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.06□□□□□ -2.4
SYNE1Q8NF91 AC027288.2-201ENST00000553028 243 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
SYNE1Q8NF91 SNORD3E-202ENST00000627253 216 ntBASIC0.06□□□□□ -2.4
SYNE1Q8NF91 MIR1295A-201ENST00000408463 79 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AC092809.3-201ENST00000415453 231 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms