Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 RNU6-759P-201ENST00000516740 103 ntBASIC0.46□□□□□ -2.34
CCDC112Q8NEF3 MTND1P5-201ENST00000517906 940 ntBASIC0.46□□□□□ -2.34
CCDC112Q8NEF3 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
CCDC112Q8NEF3 AC009094.1-201ENST00000564443 426 ntBASIC0.46□□□□□ -2.34
CCDC112Q8NEF3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.46□□□□□ -2.34
CCDC112Q8NEF3 AL136370.1-201ENST00000608166 691 ntBASIC0.46□□□□□ -2.34
CCDC112Q8NEF3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 RNU6-1120P-201ENST00000362988 108 ntBASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 Y_RNA.159-201ENST00000363674 87 ntBASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 RNA5SP499-201ENST00000363982 119 ntBASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 SNORA2.2-201ENST00000365473 135 ntBASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 RNA5SP219-201ENST00000390940 113 ntBASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 SNORA75.2-201ENST00000391138 150 ntBASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 SNORA75.3-201ENST00000391231 150 ntBASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 AL451046.2-201ENST00000403074 277 ntBASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 MIR1185-2-201ENST00000408687 86 ntBASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 TPT1P7-201ENST00000458300 517 ntBASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 snoU13.25-201ENST00000458945 104 ntBASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 RNU1-117P-201ENST00000517041 158 ntBASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 RNA5SP454-201ENST00000517231 127 ntBASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 AP002001.1-203ENST00000534002 267 ntBASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 AK6P2-201ENST00000549020 471 ntBASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 SUB1P2-201ENST00000556401 297 ntBASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 MIR4424-201ENST00000585257 86 ntBASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 AC122133.1-201ENST00000613964 233 ntBASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.45□□□□□ -2.34
CCDC112Q8NEF3 RNU6-1329P-201ENST00000365664 107 ntBASIC0.44□□□□□ -2.34
CCDC112Q8NEF3 RNU6-424P-201ENST00000384367 105 ntBASIC0.44□□□□□ -2.34
CCDC112Q8NEF3 AL049545.1-201ENST00000401856 572 ntBASIC0.44□□□□□ -2.34
CCDC112Q8NEF3 MTATP6P18-201ENST00000417994 673 ntBASIC0.44□□□□□ -2.34
CCDC112Q8NEF3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.44□□□□□ -2.34
CCDC112Q8NEF3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.44□□□□□ -2.34
CCDC112Q8NEF3 RPEP5-201ENST00000441137 268 ntBASIC0.44□□□□□ -2.34
CCDC112Q8NEF3 RNU7-90P-201ENST00000459216 62 ntBASIC0.44□□□□□ -2.34
CCDC112Q8NEF3 U8.21-201ENST00000459536 136 ntBASIC0.44□□□□□ -2.34
CCDC112Q8NEF3 AL049830.1-201ENST00000468034 425 ntBASIC0.44□□□□□ -2.34
CCDC112Q8NEF3 AC098869.1-201ENST00000481627 292 ntBASIC0.44□□□□□ -2.34
CCDC112Q8NEF3 MTND1P22-201ENST00000510572 951 ntBASIC0.44□□□□□ -2.34
CCDC112Q8NEF3 RNU6-430P-201ENST00000517078 107 ntBASIC0.44□□□□□ -2.34
CCDC112Q8NEF3 AL357312.1-201ENST00000603879 298 ntBASIC0.44□□□□□ -2.34
CCDC112Q8NEF3 SNORD11B-201ENST00000607707 90 ntBASIC0.44□□□□□ -2.34
CCDC112Q8NEF3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.44□□□□□ -2.34
CCDC112Q8NEF3 uc_338.34-201ENST00000617467 174 ntBASIC0.44□□□□□ -2.34
CCDC112Q8NEF3 AF246928.1-201ENST00000623768 87 ntBASIC0.44□□□□□ -2.34
CCDC112Q8NEF3 CASC19-280ENST00000642102 1351 ntBASIC0.44□□□□□ -2.34
CCDC112Q8NEF3 FGF7P2-201ENST00000332473 296 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 RNU6-784P-201ENST00000384330 106 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 SNORD116-13-201ENST00000384408 92 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 MIR320B2-201ENST00000408479 138 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 MTND2P18-201ENST00000419962 1030 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 AC244023.1-201ENST00000426884 112 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 CALM2P4-201ENST00000430810 426 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 AL031667.1-201ENST00000440222 725 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 STAG3L5P-204ENST00000443759 179 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 AC073415.1-201ENST00000449240 153 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 NDUFB4P10-201ENST00000452541 359 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 RNU7-94P-201ENST00000459576 63 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 RPL23AP75-201ENST00000491601 451 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 AC113410.1-201ENST00000505029 247 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 AC022493.2-201ENST00000506122 481 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 AC060788.1-201ENST00000521318 469 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 MTND4P7-201ENST00000523876 130 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 AC104576.1-201ENST00000524225 88 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 AC007834.2-201ENST00000536310 343 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 MIR3913-1-201ENST00000577744 102 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 MIR3915-201ENST00000578518 97 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 CPDP1-201ENST00000579660 283 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 AC242498.1-201ENST00000604134 111 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 AC008536.2-201ENST00000607284 349 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 MIR8087-201ENST00000612745 78 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 AC243994.1-201ENST00000618627 109 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 AC137590.2-201ENST00000619709 240 ntBASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 FER-210ENST00000628534 558 ntTSL 5 BASIC0.43□□□□□ -2.34
CCDC112Q8NEF3 Y_RNA.100-201ENST00000363141 102 ntBASIC0.42□□□□□ -2.34
CCDC112Q8NEF3 RNA5SP457-201ENST00000363657 124 ntBASIC0.42□□□□□ -2.34
CCDC112Q8NEF3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.42□□□□□ -2.34
CCDC112Q8NEF3 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.42□□□□□ -2.34
CCDC112Q8NEF3 RNU6-945P-201ENST00000383947 107 ntBASIC0.42□□□□□ -2.34
CCDC112Q8NEF3 MIR625-201ENST00000385047 85 ntBASIC0.42□□□□□ -2.34
CCDC112Q8NEF3 U8.16-201ENST00000391279 133 ntBASIC0.42□□□□□ -2.34
CCDC112Q8NEF3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.42□□□□□ -2.34
CCDC112Q8NEF3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC112Q8NEF3 USP9YP29-201ENST00000445112 563 ntBASIC0.42□□□□□ -2.34
CCDC112Q8NEF3 RPL39P39-201ENST00000455840 151 ntBASIC0.42□□□□□ -2.34
CCDC112Q8NEF3 AC092989.1-201ENST00000481235 277 ntBASIC0.42□□□□□ -2.34
CCDC112Q8NEF3 MTND1P35-201ENST00000526739 508 ntBASIC0.42□□□□□ -2.34
CCDC112Q8NEF3 SNORA28-201ENST00000606769 126 ntBASIC0.42□□□□□ -2.34
CCDC112Q8NEF3 AC004832.4-201ENST00000608952 331 ntBASIC0.42□□□□□ -2.34
CCDC112Q8NEF3 AL096861.1-201ENST00000610899 123 ntBASIC0.42□□□□□ -2.34
CCDC112Q8NEF3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.42□□□□□ -2.34
CCDC112Q8NEF3 AL390237.1-201ENST00000404226 1415 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms