Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RN7SKP101-201ENST00000411376 320 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 AC003989.2-201ENST00000440224 169 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 MTCO3P10-201ENST00000455912 772 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 RPS29P11-201ENST00000496507 171 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 AC093023.1-201ENST00000547375 507 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 AL355375.2-201ENST00000574825 175 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 MZT1P2-201ENST00000604387 248 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 AC010900.2-201ENST00000604508 210 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 Y_RNA.804-201ENST00000615262 101 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 AC126177.8-201ENST00000618339 1015 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 AC006001.4-201ENST00000622243 395 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 AC068205.3-201ENST00000636385 468 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 Y_RNA.70-201ENST00000362886 110 ntBASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 RNU1-96P-201ENST00000364163 162 ntBASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-879P-201ENST00000364328 108 ntBASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 Y_RNA.364-201ENST00000365532 101 ntBASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-1235P-201ENST00000384559 107 ntBASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 Y_RNA.557-201ENST00000384680 107 ntBASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 U8.22-201ENST00000459141 133 ntBASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 snoU13.15-201ENST00000459407 104 ntBASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-498P-201ENST00000459468 107 ntBASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 AC005908.1-201ENST00000468701 347 ntBASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 AC023790.1-201ENST00000482174 347 ntBASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 RPS29P21-201ENST00000496272 170 ntBASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 RPL23AP63-201ENST00000498752 471 ntBASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-107P-201ENST00000516643 102 ntBASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-856P-201ENST00000516959 98 ntBASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 AC022868.1-201ENST00000517767 391 ntBASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 AC110588.1-201ENST00000559699 137 ntBASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 AC025253.1-201ENST00000613623 543 ntBASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 AC008873.1-201ENST00000625051 138 ntBASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 MTND5P35-201ENST00000557537 1720 ntBASIC1.35□□□□□ -2.19
CCDC71LQ8N9Z2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 MIR424-201ENST00000362227 98 ntBASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 Y_RNA.67-201ENST00000362870 100 ntBASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 RNU5F-3P-201ENST00000363767 117 ntBASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-296P-201ENST00000384608 107 ntBASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 RNU1-139P-201ENST00000391307 165 ntBASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-1156P-201ENST00000410365 100 ntBASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 RNU2-7P-201ENST00000410794 178 ntBASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-1001P-201ENST00000411265 100 ntBASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 MIR2053-201ENST00000459295 91 ntBASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 AC011406.1-201ENST00000512440 370 ntBASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 RNU2-34P-201ENST00000516534 121 ntBASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 AC090617.3-201ENST00000573670 475 ntBASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 AC084781.2-201ENST00000615568 161 ntBASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 snoZ196.1-201ENST00000625269 89 ntBASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 AC112487.2-201ENST00000637950 304 ntBASIC1.34□□□□□ -2.19
CCDC71LQ8N9Z2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.34□□□□□ -2.2
CCDC71LQ8N9Z2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 Y_RNA.58-201ENST00000362807 102 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 Y_RNA.154-201ENST00000363624 102 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 Y_RNA.263-201ENST00000364659 114 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 RNY3P1-201ENST00000365085 102 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 RNY3-201ENST00000365484 102 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 RNU6-338P-201ENST00000383888 105 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 SNORD116-29-201ENST00000384516 83 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 MIR583-201ENST00000384846 75 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 RNY4P36-201ENST00000391116 96 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 MIR1253-201ENST00000408273 105 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 MTND4LP11-201ENST00000422184 280 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 EIF1P2-201ENST00000428233 350 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 MTATP6P23-201ENST00000440153 476 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 RPS29P23-201ENST00000458635 123 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 Y_RNA.632-201ENST00000459189 102 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 AC105758.1-201ENST00000506038 399 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 RNU6-470P-201ENST00000515954 104 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 Y_RNA.675-201ENST00000516389 149 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 Y_RNA.683-201ENST00000516508 93 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 Y_RNA.718-201ENST00000517110 102 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 AC093027.1-201ENST00000546698 429 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 AK6P2-201ENST00000549020 471 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 AL160236.1-201ENST00000556317 195 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 AC125232.2-201ENST00000592457 143 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 MIR502-201ENST00000606349 86 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 AC133104.2-201ENST00000615272 193 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms