Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 snoU13.18-201ENST00000459483 104 ntBASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 RPL23AP75-201ENST00000491601 451 ntBASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 SNORA19.2-201ENST00000516013 114 ntBASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 RNU6-1223P-201ENST00000517124 104 ntBASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 AC004812.1-201ENST00000540773 146 ntBASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 MIR5692C1-201ENST00000585309 91 ntBASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.57□□□□□ -2.32
ZIC4Q8N9L1 SNORD115-8-201ENST00000363856 82 ntBASIC0.56□□□□□ -2.32
ZIC4Q8N9L1 SNORD115-38-201ENST00000365037 82 ntBASIC0.56□□□□□ -2.32
ZIC4Q8N9L1 MIR487A-201ENST00000385009 80 ntBASIC0.56□□□□□ -2.32
ZIC4Q8N9L1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
ZIC4Q8N9L1 RNU6-1158P-201ENST00000391167 107 ntBASIC0.56□□□□□ -2.32
ZIC4Q8N9L1 MIR450B-201ENST00000401182 78 ntBASIC0.56□□□□□ -2.32
ZIC4Q8N9L1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.56□□□□□ -2.32
ZIC4Q8N9L1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.56□□□□□ -2.32
ZIC4Q8N9L1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.56□□□□□ -2.32
ZIC4Q8N9L1 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.56□□□□□ -2.32
ZIC4Q8N9L1 APOOP3-201ENST00000536787 586 ntBASIC0.56□□□□□ -2.32
ZIC4Q8N9L1 CPDP1-201ENST00000579660 283 ntBASIC0.56□□□□□ -2.32
ZIC4Q8N9L1 MIR4714-201ENST00000580728 77 ntBASIC0.56□□□□□ -2.32
ZIC4Q8N9L1 AL121757.2-201ENST00000611223 313 ntBASIC0.56□□□□□ -2.32
ZIC4Q8N9L1 SNORA2.2-201ENST00000365473 135 ntBASIC0.55□□□□□ -2.32
ZIC4Q8N9L1 Y_RNA.363-201ENST00000365529 113 ntBASIC0.55□□□□□ -2.32
ZIC4Q8N9L1 RNU6-1103P-201ENST00000384150 107 ntBASIC0.55□□□□□ -2.32
ZIC4Q8N9L1 AL663109.1-201ENST00000411498 844 ntBASIC0.55□□□□□ -2.32
ZIC4Q8N9L1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.55□□□□□ -2.32
ZIC4Q8N9L1 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.55□□□□□ -2.32
ZIC4Q8N9L1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.55□□□□□ -2.32
ZIC4Q8N9L1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.55□□□□□ -2.32
ZIC4Q8N9L1 Y_RNA.654-201ENST00000497848 106 ntBASIC0.55□□□□□ -2.32
ZIC4Q8N9L1 AC092436.3-201ENST00000511788 257 ntBASIC0.55□□□□□ -2.32
ZIC4Q8N9L1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.55□□□□□ -2.32
ZIC4Q8N9L1 RNA5SP401-201ENST00000515920 127 ntBASIC0.55□□□□□ -2.32
ZIC4Q8N9L1 AC100830.2-201ENST00000581636 240 ntBASIC0.55□□□□□ -2.32
ZIC4Q8N9L1 AC080078.2-201ENST00000603766 501 ntBASIC0.55□□□□□ -2.32
ZIC4Q8N9L1 AL355796.1-201ENST00000406706 323 ntBASIC0.54□□□□□ -2.32
ZIC4Q8N9L1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.54□□□□□ -2.32
ZIC4Q8N9L1 AC091133.4-201ENST00000511142 308 ntBASIC0.54□□□□□ -2.32
ZIC4Q8N9L1 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.54□□□□□ -2.32
ZIC4Q8N9L1 SNORA25.14-201ENST00000516481 132 ntBASIC0.54□□□□□ -2.32
ZIC4Q8N9L1 RNU6-1038P-201ENST00000516516 104 ntBASIC0.54□□□□□ -2.32
ZIC4Q8N9L1 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.54□□□□□ -2.32
ZIC4Q8N9L1 AL118558.2-201ENST00000556294 238 ntBASIC0.54□□□□□ -2.32
ZIC4Q8N9L1 MIR5000-201ENST00000577717 103 ntBASIC0.54□□□□□ -2.32
ZIC4Q8N9L1 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.54□□□□□ -2.32
ZIC4Q8N9L1 Y_RNA.167-201ENST00000363735 109 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 RNU5F-3P-201ENST00000363767 117 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 Y_RNA.265-201ENST00000364677 108 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 SNORD87-201ENST00000364849 89 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 RNU4-9P-201ENST00000364951 139 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 RNU4-66P-201ENST00000365199 138 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 RNU6-969P-201ENST00000383900 105 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 RNU6-348P-201ENST00000384386 107 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 RNU6-733P-201ENST00000410759 104 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 RN7SKP142-201ENST00000411236 328 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 AL353193.1-201ENST00000421444 268 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 MTCO2P19-201ENST00000427513 598 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 AL606489.2-201ENST00000433886 234 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 MTCO2P16-201ENST00000436962 677 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 MTCO3P18-201ENST00000440206 761 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 RNU7-90P-201ENST00000459216 62 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 AC022493.2-201ENST00000506122 481 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 AC091885.1-201ENST00000506658 268 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 SNORA40.12-201ENST00000516329 111 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 AC004817.2-201ENST00000561794 651 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 MIR4438-201ENST00000585271 93 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 AC010620.1-201ENST00000601088 1102 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 AC006435.5-201ENST00000624486 112 ntBASIC0.53□□□□□ -2.32
ZIC4Q8N9L1 RNA5SP361-201ENST00000362686 118 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 SNORD115-32-201ENST00000364079 82 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 Y_RNA.319-201ENST00000365138 92 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 Y_RNA.378-201ENST00000365652 113 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 RNY1P14-201ENST00000384426 108 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 Y_RNA.508-201ENST00000384502 114 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 MIR562-201ENST00000384894 95 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 MIR32-201ENST00000384965 70 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 EIF4E2P1-201ENST00000393781 255 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 AL353572.1-201ENST00000442490 417 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 MTCO2P7-201ENST00000446518 666 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 MRPS10P1-201ENST00000448483 130 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 RNU7-21P-201ENST00000459430 62 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 RNU6-917P-201ENST00000516294 104 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 Y_RNA.673-201ENST00000516306 88 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 RNA5SP255-201ENST00000516370 107 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 RNU7-28P-201ENST00000516759 62 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 AC016957.1-201ENST00000534895 309 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 AK6P2-201ENST00000549020 471 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 FRG2DP-202ENST00000566967 323 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 MIR4528-201ENST00000577763 90 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 SNORA4-201ENST00000584302 138 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 AC073648.5-201ENST00000603502 305 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 AC007684.1-201ENST00000609671 477 ntBASIC0.52□□□□□ -2.33
ZIC4Q8N9L1 AC017083.3-201ENST00000609955 700 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms