Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 CD24P4-201ENST00000382840 243 ntBASIC2.76□□□□□ -1.97
SLC44A3Q8N4M1 MIR186-201ENST00000384988 86 ntBASIC2.76□□□□□ -1.97
SLC44A3Q8N4M1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.76□□□□□ -1.97
SLC44A3Q8N4M1 AL451074.5-201ENST00000415894 435 ntBASIC2.76□□□□□ -1.97
SLC44A3Q8N4M1 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.76□□□□□ -1.97
SLC44A3Q8N4M1 RNU6-155P-201ENST00000516347 100 ntBASIC2.76□□□□□ -1.97
SLC44A3Q8N4M1 RNU6-344P-201ENST00000516635 111 ntBASIC2.76□□□□□ -1.97
SLC44A3Q8N4M1 AC109329.2-201ENST00000519658 482 ntBASIC2.76□□□□□ -1.97
SLC44A3Q8N4M1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.76□□□□□ -1.97
SLC44A3Q8N4M1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.76□□□□□ -1.97
SLC44A3Q8N4M1 SNRPGP20-201ENST00000604477 205 ntBASIC2.76□□□□□ -1.97
SLC44A3Q8N4M1 AC005828.6-201ENST00000606610 232 ntBASIC2.76□□□□□ -1.97
SLC44A3Q8N4M1 AL008718.3-201ENST00000610217 321 ntBASIC2.76□□□□□ -1.97
SLC44A3Q8N4M1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.76□□□□□ -1.97
SLC44A3Q8N4M1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.76□□□□□ -1.97
SLC44A3Q8N4M1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 SNORD114-19-201ENST00000363072 75 ntBASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 SNORD113-1-201ENST00000365321 69 ntBASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 RNY1P5-201ENST00000383890 115 ntBASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 RNU6-1264P-201ENST00000383891 107 ntBASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 RNU6-211P-201ENST00000384047 107 ntBASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 MIR592-201ENST00000384959 97 ntBASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 MIR147B-201ENST00000390185 80 ntBASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 Z98742.3-201ENST00000418637 326 ntBASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 RPS29P12-201ENST00000460178 152 ntBASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 AP004217.1-201ENST00000480579 346 ntBASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 EIF4A1P12-201ENST00000551910 141 ntBASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 MIR5692C2-201ENST00000577959 77 ntBASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 AC090115.4-201ENST00000609970 188 ntBASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 snoU18.1-201ENST00000629629 71 ntBASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 MAPK10-322ENST00000641485 4530 ntBASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.75□□□□□ -1.97
SLC44A3Q8N4M1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 MIR26A1-201ENST00000362205 77 ntBASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 RNU6-1210P-201ENST00000363775 107 ntBASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 RNA5SP139-201ENST00000364340 117 ntBASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 SNORA14A-201ENST00000364773 135 ntBASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 RNU6-1310P-201ENST00000384153 107 ntBASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 SNORA67.2-201ENST00000384300 149 ntBASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 AL513477.1-202ENST00000417061 214 ntBASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 AC003685.2-201ENST00000422795 395 ntBASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 AL135790.2-201ENST00000437701 267 ntBASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 RPS29P21-201ENST00000496272 170 ntBASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 Y_RNA.662-201ENST00000516028 97 ntBASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 RNU6-1219P-201ENST00000516143 112 ntBASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 RNU6-436P-201ENST00000516171 114 ntBASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 MRPS18CP4-201ENST00000535821 231 ntBASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 AC079598.5-201ENST00000547460 117 ntBASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 AC005562.2-201ENST00000618264 111 ntBASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 AL365265.1-201ENST00000621045 234 ntBASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.74□□□□□ -1.97
SLC44A3Q8N4M1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 RNA5SP289-201ENST00000362332 137 ntBASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 Y_RNA.308-201ENST00000365043 101 ntBASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 RNU1-57P-201ENST00000384491 166 ntBASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 MIR320B2-201ENST00000408479 138 ntBASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 RNU6-394P-201ENST00000410735 107 ntBASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 AC004386.2-201ENST00000441858 148 ntBASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 RPL31P41-201ENST00000477967 372 ntBASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 AC145146.1-201ENST00000496370 254 ntBASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 RNU7-200P-201ENST00000516105 62 ntBASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 RNU6-1278P-201ENST00000516130 107 ntBASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 MTND5P41-201ENST00000517498 206 ntBASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 AP005660.1-201ENST00000522972 293 ntBASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 AC025281.1-201ENST00000567026 265 ntBASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 SNORD11B-201ENST00000607707 90 ntBASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 TCL6_2.1-201ENST00000615162 119 ntBASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
SLC44A3Q8N4M1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms