Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MIR378F-201ENST00000578143 78 ntBASIC-1.13□□□□□ -2.59
VPS8Q8N3P4 AC006504.8-201ENST00000621046 635 ntBASIC-1.13□□□□□ -2.59
VPS8Q8N3P4 RNA5SP118-201ENST00000410385 109 ntBASIC-1.14□□□□□ -2.59
VPS8Q8N3P4 AL953862.1-201ENST00000423016 168 ntBASIC-1.14□□□□□ -2.59
VPS8Q8N3P4 AC010975.2-201ENST00000427781 588 ntBASIC-1.14□□□□□ -2.59
VPS8Q8N3P4 AC107401.1-201ENST00000503426 685 ntBASIC-1.14□□□□□ -2.59
VPS8Q8N3P4 AC091885.1-201ENST00000506658 268 ntBASIC-1.14□□□□□ -2.59
VPS8Q8N3P4 RNU4-49P-201ENST00000516080 140 ntBASIC-1.14□□□□□ -2.59
VPS8Q8N3P4 AC008250.2-201ENST00000615261 205 ntBASIC-1.14□□□□□ -2.59
VPS8Q8N3P4 AL162726.3-218ENST00000636401 95 ntBASIC-1.14□□□□□ -2.59
VPS8Q8N3P4 AC092104.1-201ENST00000497346 1441 ntBASIC-1.14□□□□□ -2.59
VPS8Q8N3P4 MTND5P33-201ENST00000571250 1450 ntBASIC-1.14□□□□□ -2.59
VPS8Q8N3P4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-1.15□□□□□ -2.59
VPS8Q8N3P4 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.15□□□□□ -2.59
VPS8Q8N3P4 MIR760-201ENST00000390220 80 ntBASIC-1.15□□□□□ -2.59
VPS8Q8N3P4 AC069271.1-201ENST00000445577 156 ntBASIC-1.15□□□□□ -2.59
VPS8Q8N3P4 AC074290.1-201ENST00000448883 135 ntBASIC-1.15□□□□□ -2.59
VPS8Q8N3P4 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-1.15□□□□□ -2.59
VPS8Q8N3P4 RPL17P19-201ENST00000489069 552 ntBASIC-1.15□□□□□ -2.59
VPS8Q8N3P4 RN7SKP164-201ENST00000516138 266 ntBASIC-1.15□□□□□ -2.59
VPS8Q8N3P4 RNU6-150P-201ENST00000516237 95 ntBASIC-1.15□□□□□ -2.59
VPS8Q8N3P4 MRPS36P4-201ENST00000534436 298 ntBASIC-1.15□□□□□ -2.59
VPS8Q8N3P4 MIR3115-201ENST00000577915 68 ntBASIC-1.15□□□□□ -2.59
VPS8Q8N3P4 AC100814.1-201ENST00000606963 623 ntBASIC-1.15□□□□□ -2.59
VPS8Q8N3P4 AL355073.2-201ENST00000612106 557 ntBASIC-1.15□□□□□ -2.59
VPS8Q8N3P4 RNU6-289P-201ENST00000364093 107 ntBASIC-1.15□□□□□ -2.59
VPS8Q8N3P4 RNU6-24P-201ENST00000384440 107 ntBASIC-1.15□□□□□ -2.59
VPS8Q8N3P4 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.15□□□□□ -2.59
VPS8Q8N3P4 SNORD65.1-201ENST00000390889 71 ntBASIC-1.15□□□□□ -2.59
VPS8Q8N3P4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-1.15□□□□□ -2.59
VPS8Q8N3P4 MTND4LP14-201ENST00000429447 288 ntBASIC-1.15□□□□□ -2.59
VPS8Q8N3P4 EXOSC3P1-201ENST00000448649 500 ntBASIC-1.15□□□□□ -2.59
VPS8Q8N3P4 AC022960.3-201ENST00000619794 441 ntBASIC-1.15□□□□□ -2.59
VPS8Q8N3P4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.15□□□□□ -2.59
VPS8Q8N3P4 RNY3-201ENST00000365484 102 ntBASIC-1.16□□□□□ -2.6
VPS8Q8N3P4 MLLT10P1-201ENST00000418346 262 ntBASIC-1.16□□□□□ -2.6
VPS8Q8N3P4 AC090960.1-201ENST00000421072 306 ntBASIC-1.16□□□□□ -2.6
VPS8Q8N3P4 SNORA27.4-201ENST00000516650 95 ntBASIC-1.16□□□□□ -2.6
VPS8Q8N3P4 AC021451.1-201ENST00000523498 1129 ntBASIC-1.16□□□□□ -2.6
VPS8Q8N3P4 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-1.16□□□□□ -2.6
VPS8Q8N3P4 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-1.16□□□□□ -2.6
VPS8Q8N3P4 AL117336.2-201ENST00000602435 335 ntBASIC-1.16□□□□□ -2.6
VPS8Q8N3P4 MIR198-201ENST00000637333 62 ntBASIC-1.16□□□□□ -2.6
VPS8Q8N3P4 RNU5B-1-201ENST00000363286 116 ntBASIC-1.17□□□□□ -2.6
VPS8Q8N3P4 U6.112-201ENST00000384129 70 ntBASIC-1.17□□□□□ -2.6
VPS8Q8N3P4 RNU6-190P-201ENST00000384154 102 ntBASIC-1.17□□□□□ -2.6
VPS8Q8N3P4 MIR520C-201ENST00000385005 87 ntBASIC-1.17□□□□□ -2.6
VPS8Q8N3P4 AC092809.3-201ENST00000415453 231 ntBASIC-1.17□□□□□ -2.6
VPS8Q8N3P4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-1.17□□□□□ -2.6
VPS8Q8N3P4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-1.17□□□□□ -2.6
VPS8Q8N3P4 AC079395.1-201ENST00000510981 262 ntBASIC-1.17□□□□□ -2.6
VPS8Q8N3P4 RNA5SP470-201ENST00000516463 106 ntBASIC-1.17□□□□□ -2.6
VPS8Q8N3P4 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-1.17□□□□□ -2.6
VPS8Q8N3P4 DEFB131D-201ENST00000526803 184 ntBASIC-1.17□□□□□ -2.6
VPS8Q8N3P4 DEFB131C-201ENST00000528817 165 ntBASIC-1.17□□□□□ -2.6
VPS8Q8N3P4 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-1.17□□□□□ -2.6
VPS8Q8N3P4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-1.17□□□□□ -2.6
VPS8Q8N3P4 MIR499B-201ENST00000636498 73 ntBASIC-1.17□□□□□ -2.6
VPS8Q8N3P4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-1.18□□□□□ -2.6
VPS8Q8N3P4 RNU6-369P-201ENST00000362515 102 ntBASIC-1.18□□□□□ -2.6
VPS8Q8N3P4 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.18□□□□□ -2.6
VPS8Q8N3P4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-1.18□□□□□ -2.6
VPS8Q8N3P4 MTND1P14-201ENST00000427400 950 ntBASIC-1.18□□□□□ -2.6
VPS8Q8N3P4 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-1.18□□□□□ -2.6
VPS8Q8N3P4 NAMPTP3-201ENST00000569273 224 ntBASIC-1.18□□□□□ -2.6
VPS8Q8N3P4 AC090186.1-201ENST00000605991 572 ntBASIC-1.18□□□□□ -2.6
VPS8Q8N3P4 AC093875.1-201ENST00000623688 504 ntBASIC-1.18□□□□□ -2.6
VPS8Q8N3P4 AC112487.2-201ENST00000637950 304 ntBASIC-1.18□□□□□ -2.6
VPS8Q8N3P4 RNU4-16P-201ENST00000364737 141 ntBASIC-1.19□□□□□ -2.6
VPS8Q8N3P4 RNU6-384P-201ENST00000364900 104 ntBASIC-1.19□□□□□ -2.6
VPS8Q8N3P4 MTND3P17-201ENST00000416968 344 ntBASIC-1.19□□□□□ -2.6
VPS8Q8N3P4 RN7SKP19-201ENST00000516016 252 ntBASIC-1.19□□□□□ -2.6
VPS8Q8N3P4 RNU6-897P-201ENST00000517135 105 ntBASIC-1.19□□□□□ -2.6
VPS8Q8N3P4 MIR4263-201ENST00000584745 83 ntBASIC-1.19□□□□□ -2.6
VPS8Q8N3P4 MIR548AC-201ENST00000585049 88 ntBASIC-1.19□□□□□ -2.6
VPS8Q8N3P4 VN1R87P-201ENST00000596706 487 ntBASIC-1.19□□□□□ -2.6
VPS8Q8N3P4 RNU6-934P-201ENST00000365154 107 ntBASIC-1.2□□□□□ -2.6
VPS8Q8N3P4 SNORD100-201ENST00000408573 76 ntBASIC-1.2□□□□□ -2.6
VPS8Q8N3P4 RNU6-293P-201ENST00000411259 106 ntBASIC-1.2□□□□□ -2.6
VPS8Q8N3P4 DEFB130D-201ENST00000426866 237 ntBASIC-1.2□□□□□ -2.6
VPS8Q8N3P4 AC133104.1-201ENST00000429100 218 ntBASIC-1.2□□□□□ -2.6
VPS8Q8N3P4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-1.2□□□□□ -2.6
VPS8Q8N3P4 AC005042.3-201ENST00000453230 174 ntBASIC-1.2□□□□□ -2.6
VPS8Q8N3P4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-1.2□□□□□ -2.6
VPS8Q8N3P4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-1.2□□□□□ -2.6
VPS8Q8N3P4 MIR4789-201ENST00000577469 82 ntBASIC-1.2□□□□□ -2.6
VPS8Q8N3P4 AL158042.1-201ENST00000605338 460 ntBASIC-1.2□□□□□ -2.6
VPS8Q8N3P4 AC246785.4-201ENST00000605374 287 ntBASIC-1.2□□□□□ -2.6
VPS8Q8N3P4 Z99289.3-201ENST00000605586 594 ntBASIC-1.2□□□□□ -2.6
VPS8Q8N3P4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.21□□□□□ -2.6
VPS8Q8N3P4 RNU6-1240P-201ENST00000365155 104 ntBASIC-1.21□□□□□ -2.6
VPS8Q8N3P4 Y_RNA.336-201ENST00000365307 109 ntBASIC-1.21□□□□□ -2.6
VPS8Q8N3P4 MIR563-201ENST00000385080 79 ntBASIC-1.21□□□□□ -2.6
VPS8Q8N3P4 MIR4804-201ENST00000581683 73 ntBASIC-1.21□□□□□ -2.6
VPS8Q8N3P4 FER-210ENST00000628534 558 ntTSL 5 BASIC-1.21□□□□□ -2.6
VPS8Q8N3P4 RNA5SP117-201ENST00000365294 118 ntBASIC-1.22□□□□□ -2.6
VPS8Q8N3P4 RNU6-481P-201ENST00000384194 107 ntBASIC-1.22□□□□□ -2.6
VPS8Q8N3P4 MIR208B-201ENST00000401172 77 ntBASIC-1.22□□□□□ -2.6
VPS8Q8N3P4 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-1.22□□□□□ -2.6
VPS8Q8N3P4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-1.22□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 200.7 ms