Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 AC099522.1-202ENST00000514718 367 ntBASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 RNU7-99P-201ENST00000516271 62 ntBASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 RNA5SP315-201ENST00000516340 116 ntBASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 RNA5SP312-201ENST00000517068 116 ntBASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 RNU6-1096P-201ENST00000517089 102 ntBASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 AC007229.1-201ENST00000590455 412 ntBASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 MAPK10-266ENST00000641066 6555 ntBASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
DEPDC4Q8N2C3 AC138915.1-201ENST00000565427 1685 ntBASIC3.66□□□□□ -1.82
DEPDC4Q8N2C3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
DEPDC4Q8N2C3 snoU2-30.2-201ENST00000362805 70 ntBASIC3.66□□□□□ -1.82
DEPDC4Q8N2C3 SNORA62.3-201ENST00000365110 153 ntBASIC3.66□□□□□ -1.82
DEPDC4Q8N2C3 SNORA70.4-201ENST00000365509 134 ntBASIC3.66□□□□□ -1.82
DEPDC4Q8N2C3 RNU6-44P-201ENST00000384045 107 ntBASIC3.66□□□□□ -1.82
DEPDC4Q8N2C3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
DEPDC4Q8N2C3 AC003685.2-201ENST00000422795 395 ntBASIC3.66□□□□□ -1.82
DEPDC4Q8N2C3 RPS15AP28-201ENST00000435088 386 ntBASIC3.66□□□□□ -1.82
DEPDC4Q8N2C3 HMGN2P34-201ENST00000437647 269 ntBASIC3.66□□□□□ -1.82
DEPDC4Q8N2C3 AC006011.1-201ENST00000442758 349 ntBASIC3.66□□□□□ -1.82
DEPDC4Q8N2C3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.66□□□□□ -1.82
DEPDC4Q8N2C3 RNU7-107P-201ENST00000459121 61 ntBASIC3.66□□□□□ -1.82
DEPDC4Q8N2C3 RN7SL691P-201ENST00000494487 301 ntBASIC3.66□□□□□ -1.82
DEPDC4Q8N2C3 RNU7-149P-201ENST00000516739 59 ntBASIC3.66□□□□□ -1.82
DEPDC4Q8N2C3 AC023632.4-201ENST00000517783 191 ntBASIC3.66□□□□□ -1.82
DEPDC4Q8N2C3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.66□□□□□ -1.82
DEPDC4Q8N2C3 AC244505.7-201ENST00000599675 272 ntBASIC3.66□□□□□ -1.82
DEPDC4Q8N2C3 AL355297.2-201ENST00000604792 129 ntBASIC3.66□□□□□ -1.82
DEPDC4Q8N2C3 AL353149.1-201ENST00000610667 244 ntBASIC3.66□□□□□ -1.82
DEPDC4Q8N2C3 MIR6075-201ENST00000620782 95 ntBASIC3.66□□□□□ -1.82
DEPDC4Q8N2C3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
DEPDC4Q8N2C3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
DEPDC4Q8N2C3 MAPK10-362ENST00000641864 4484 ntBASIC3.65□□□□□ -1.82
DEPDC4Q8N2C3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 SPRR2C-201ENST00000290702 219 ntBASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 Y_RNA.91-201ENST00000363042 107 ntBASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 MIR554-201ENST00000384874 96 ntBASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 SNORA11.1-201ENST00000408133 129 ntBASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 RNU6-1064P-201ENST00000410626 104 ntBASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 SRIP3-201ENST00000413200 219 ntBASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 AL513477.1-202ENST00000417061 214 ntBASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 AL158823.1-201ENST00000418441 478 ntBASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 AC006539.3-201ENST00000454258 129 ntBASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 RNA5SP246-201ENST00000458909 119 ntBASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 FCF1P8-201ENST00000510322 597 ntBASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 AC011406.1-201ENST00000512440 370 ntBASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 AC025627.2-201ENST00000576220 160 ntBASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 MIR5684-201ENST00000585074 65 ntBASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 MIR8058-201ENST00000615737 89 ntBASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 Pinc.1-201ENST00000616452 154 ntBASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.65□□□□□ -1.83
DEPDC4Q8N2C3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.64□□□□□ -1.83
DEPDC4Q8N2C3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
DEPDC4Q8N2C3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.64□□□□□ -1.83
DEPDC4Q8N2C3 RN7SL601P-201ENST00000471221 293 ntBASIC3.64□□□□□ -1.83
DEPDC4Q8N2C3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.64□□□□□ -1.83
DEPDC4Q8N2C3 AL358944.1-201ENST00000528537 144 ntBASIC3.64□□□□□ -1.83
DEPDC4Q8N2C3 MIR4286-201ENST00000580651 93 ntBASIC3.64□□□□□ -1.83
DEPDC4Q8N2C3 AL365205.2-201ENST00000594586 68 ntBASIC3.64□□□□□ -1.83
DEPDC4Q8N2C3 AC073413.2-201ENST00000604332 360 ntBASIC3.64□□□□□ -1.83
DEPDC4Q8N2C3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.64□□□□□ -1.83
DEPDC4Q8N2C3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
DEPDC4Q8N2C3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
DEPDC4Q8N2C3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 AC018630.2-201ENST00000534866 2403 ntBASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 U8.1-201ENST00000362843 134 ntBASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 RNA5SP387-201ENST00000364226 106 ntBASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 Y_RNA.242-201ENST00000364473 110 ntBASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 RNU6-1336P-201ENST00000383886 109 ntBASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 AL603914.1-201ENST00000401964 204 ntBASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 RNU2-52P-201ENST00000410680 190 ntBASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 CYCSP49-201ENST00000420810 319 ntBASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 AL158147.1-201ENST00000443970 75 ntBASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 RN7SL542P-201ENST00000467147 294 ntBASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 MIR3121-201ENST00000579680 77 ntBASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 AC091178.2-201ENST00000584401 117 ntBASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 U6.95-201ENST00000636931 70 ntBASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 MIR3914-2-201ENST00000637339 95 ntBASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.63□□□□□ -1.83
DEPDC4Q8N2C3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
DEPDC4Q8N2C3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms