Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 ELOCP21-201ENST00000412558 336 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.03□□□□□ -2.08
BEST3Q8N1M1 AC139712.2-201ENST00000424302 339 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 RNU1-131P-201ENST00000458943 161 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 RNU6-625P-201ENST00000459412 107 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 RNU6-498P-201ENST00000459468 107 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 AC010531.2-201ENST00000465012 153 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 AC010469.2-201ENST00000496412 480 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 RNU6-107P-201ENST00000516643 102 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.03□□□□□ -2.08
BEST3Q8N1M1 AK6P2-201ENST00000549020 471 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 AC121758.2-201ENST00000553271 193 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.03□□□□□ -2.08
BEST3Q8N1M1 AC104695.3-201ENST00000604052 296 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 AC124312.5-201ENST00000604451 268 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 AC040896.1-201ENST00000613819 479 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.03□□□□□ -2.08
BEST3Q8N1M1 AC240442.1-201ENST00000616055 283 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 AC010205.1-201ENST00000616668 449 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 MIR6132-201ENST00000622083 109 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 AC130454.1-201ENST00000622948 401 ntBASIC2.03□□□□□ -2.08
BEST3Q8N1M1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.03□□□□□ -2.08
BEST3Q8N1M1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
BEST3Q8N1M1 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.02□□□□□ -2.09
BEST3Q8N1M1 SNORA3A-201ENST00000364113 130 ntBASIC2.02□□□□□ -2.09
BEST3Q8N1M1 SNORA63.7-201ENST00000365579 123 ntBASIC2.02□□□□□ -2.09
BEST3Q8N1M1 MIR524-201ENST00000385242 87 ntBASIC2.02□□□□□ -2.09
BEST3Q8N1M1 TOMM22P2-201ENST00000430735 237 ntBASIC2.02□□□□□ -2.09
BEST3Q8N1M1 AC011753.1-201ENST00000451001 220 ntBASIC2.02□□□□□ -2.09
BEST3Q8N1M1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.02□□□□□ -2.09
BEST3Q8N1M1 Y_RNA.713-201ENST00000517013 96 ntBASIC2.02□□□□□ -2.09
BEST3Q8N1M1 MIR5694-201ENST00000581190 76 ntBASIC2.02□□□□□ -2.09
BEST3Q8N1M1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.02□□□□□ -2.09
BEST3Q8N1M1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.02□□□□□ -2.09
BEST3Q8N1M1 AC245884.12-201ENST00000615364 59 ntBASIC2.02□□□□□ -2.09
BEST3Q8N1M1 snoZ196.1-201ENST00000625269 89 ntBASIC2.02□□□□□ -2.09
BEST3Q8N1M1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.02□□□□□ -2.09
BEST3Q8N1M1 MIR340-201ENST00000362125 95 ntBASIC2.01□□□□□ -2.09
BEST3Q8N1M1 MIR410-201ENST00000362222 80 ntBASIC2.01□□□□□ -2.09
BEST3Q8N1M1 SNORD115-3-201ENST00000363100 82 ntBASIC2.01□□□□□ -2.09
BEST3Q8N1M1 RNU6-1164P-201ENST00000364428 107 ntBASIC2.01□□□□□ -2.09
BEST3Q8N1M1 RNU6-1310P-201ENST00000384153 107 ntBASIC2.01□□□□□ -2.09
BEST3Q8N1M1 Y_RNA.458-201ENST00000384240 102 ntBASIC2.01□□□□□ -2.09
BEST3Q8N1M1 Y_RNA.551-201ENST00000384661 102 ntBASIC2.01□□□□□ -2.09
BEST3Q8N1M1 RNU6-823P-201ENST00000391042 103 ntBASIC2.01□□□□□ -2.09
BEST3Q8N1M1 HMGN2P39-201ENST00000398005 273 ntBASIC2.01□□□□□ -2.09
BEST3Q8N1M1 MIR1185-2-201ENST00000408687 86 ntBASIC2.01□□□□□ -2.09
BEST3Q8N1M1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.01□□□□□ -2.09
BEST3Q8N1M1 AC016717.1-201ENST00000448918 286 ntBASIC2.01□□□□□ -2.09
BEST3Q8N1M1 U8.20-201ENST00000459445 131 ntBASIC2.01□□□□□ -2.09
BEST3Q8N1M1 UBL5P3-201ENST00000475112 231 ntBASIC2.01□□□□□ -2.09
BEST3Q8N1M1 RNU6-408P-201ENST00000515910 100 ntBASIC2.01□□□□□ -2.09
BEST3Q8N1M1 RNA5SP200-201ENST00000516360 103 ntBASIC2.01□□□□□ -2.09
BEST3Q8N1M1 MIR4680-201ENST00000580906 66 ntBASIC2.01□□□□□ -2.09
BEST3Q8N1M1 AC006504.6-201ENST00000590142 199 ntBASIC2.01□□□□□ -2.09
BEST3Q8N1M1 Y_RNA.772-201ENST00000606692 102 ntBASIC2.01□□□□□ -2.09
BEST3Q8N1M1 AL162373.1-201ENST00000620433 407 ntBASIC2.01□□□□□ -2.09
BEST3Q8N1M1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.01□□□□□ -2.09
BEST3Q8N1M1 AC092881.1-201ENST00000638218 2733 ntBASIC2.01□□□□□ -2.09
BEST3Q8N1M1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2□□□□□ -2.09
BEST3Q8N1M1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2□□□□□ -2.09
BEST3Q8N1M1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2□□□□□ -2.09
BEST3Q8N1M1 SNORD114-1-201ENST00000362705 72 ntBASIC2□□□□□ -2.09
BEST3Q8N1M1 RNA5SP37-201ENST00000365420 130 ntBASIC2□□□□□ -2.09
BEST3Q8N1M1 Y_RNA.380-201ENST00000365663 111 ntBASIC2□□□□□ -2.09
BEST3Q8N1M1 Y_RNA.471-201ENST00000384312 102 ntBASIC2□□□□□ -2.09
BEST3Q8N1M1 SNORA67.3-201ENST00000384366 140 ntBASIC2□□□□□ -2.09
BEST3Q8N1M1 RNA5SP475-201ENST00000410568 110 ntBASIC2□□□□□ -2.09
BEST3Q8N1M1 RNU6-57P-201ENST00000411348 103 ntBASIC2□□□□□ -2.09
BEST3Q8N1M1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
BEST3Q8N1M1 RAB28P5-201ENST00000427490 651 ntBASIC2□□□□□ -2.09
BEST3Q8N1M1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2□□□□□ -2.09
BEST3Q8N1M1 RNU6-221P-201ENST00000459541 99 ntBASIC2□□□□□ -2.09
BEST3Q8N1M1 RPL26P26-201ENST00000480251 434 ntBASIC2□□□□□ -2.09
BEST3Q8N1M1 SCARNA16.3-201ENST00000516595 184 ntBASIC2□□□□□ -2.09
BEST3Q8N1M1 RNU6-856P-201ENST00000516959 98 ntBASIC2□□□□□ -2.09
BEST3Q8N1M1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2□□□□□ -2.09
BEST3Q8N1M1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2□□□□□ -2.09
BEST3Q8N1M1 AC009831.4-201ENST00000620744 325 ntBASIC2□□□□□ -2.09
BEST3Q8N1M1 MIR7843-201ENST00000622274 79 ntBASIC2□□□□□ -2.09
BEST3Q8N1M1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
BEST3Q8N1M1 RNU1-58P-201ENST00000362413 163 ntBASIC1.99□□□□□ -2.09
BEST3Q8N1M1 SNORD114-6-201ENST00000364393 72 ntBASIC1.99□□□□□ -2.09
BEST3Q8N1M1 Y_RNA.455-201ENST00000384230 98 ntBASIC1.99□□□□□ -2.09
BEST3Q8N1M1 MIR518A2-201ENST00000384966 87 ntBASIC1.99□□□□□ -2.09
BEST3Q8N1M1 MIR504-201ENST00000385065 83 ntBASIC1.99□□□□□ -2.09
BEST3Q8N1M1 AL079342.1-201ENST00000401460 267 ntBASIC1.99□□□□□ -2.09
BEST3Q8N1M1 AL023284.1-201ENST00000403956 276 ntBASIC1.99□□□□□ -2.09
BEST3Q8N1M1 MIR1252-201ENST00000408861 65 ntBASIC1.99□□□□□ -2.09
BEST3Q8N1M1 AC104435.1-201ENST00000483483 166 ntBASIC1.99□□□□□ -2.09
BEST3Q8N1M1 AC090255.1-201ENST00000495779 349 ntBASIC1.99□□□□□ -2.09
BEST3Q8N1M1 RNU7-193P-201ENST00000516723 65 ntBASIC1.99□□□□□ -2.09
BEST3Q8N1M1 Y_RNA.715-201ENST00000517082 110 ntBASIC1.99□□□□□ -2.09
BEST3Q8N1M1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.99□□□□□ -2.09
BEST3Q8N1M1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.99□□□□□ -2.09
BEST3Q8N1M1 AC011476.5-201ENST00000615594 130 ntBASIC1.99□□□□□ -2.09
BEST3Q8N1M1 AC007742.2-201ENST00000618226 398 ntBASIC1.99□□□□□ -2.09
BEST3Q8N1M1 MIR3674-201ENST00000636576 68 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 253.7 ms