Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC83Q8IWF9 ZNF209P-201ENST00000593450 2304 ntBASIC1.56□□□□□ -2.16
CCDC83Q8IWF9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CCDC83Q8IWF9 RNU6-593P-201ENST00000364716 112 ntBASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 Y_RNA.405-201ENST00000383979 100 ntBASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 Y_RNA.451-201ENST00000384200 100 ntBASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 Y_RNA.524-201ENST00000384564 100 ntBASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 Y_RNA.561-201ENST00000384694 100 ntBASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 RNU6-417P-201ENST00000384712 107 ntBASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 MIR10B-201ENST00000385011 110 ntBASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 MIR548B-201ENST00000385247 97 ntBASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 RNU6-192P-201ENST00000391253 100 ntBASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 MIR1185-2-201ENST00000408687 86 ntBASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 RPS29P23-201ENST00000458635 123 ntBASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 RNU1-123P-201ENST00000458950 160 ntBASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 AP000870.1-201ENST00000472927 406 ntBASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 AC091179.3-201ENST00000474761 144 ntBASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 AC093303.1-201ENST00000514549 295 ntBASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 MIR4422-201ENST00000581938 83 ntBASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 AC060780.3-201ENST00000589464 80 ntBASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 AC027514.1-201ENST00000588561 1603 ntBASIC1.55□□□□□ -2.16
CCDC83Q8IWF9 RNY1P10-201ENST00000363268 113 ntBASIC1.54□□□□□ -2.16
CCDC83Q8IWF9 SNORA33-201ENST00000363664 130 ntBASIC1.54□□□□□ -2.16
CCDC83Q8IWF9 SNORD87-201ENST00000364849 89 ntBASIC1.54□□□□□ -2.16
CCDC83Q8IWF9 RNU1-78P-201ENST00000391248 165 ntBASIC1.54□□□□□ -2.16
CCDC83Q8IWF9 MTND3P8-201ENST00000412909 339 ntBASIC1.54□□□□□ -2.16
CCDC83Q8IWF9 FGF7P6-202ENST00000451282 293 ntBASIC1.54□□□□□ -2.16
CCDC83Q8IWF9 RNU7-95P-201ENST00000459222 64 ntBASIC1.54□□□□□ -2.16
CCDC83Q8IWF9 snoU13.27-201ENST00000459278 104 ntBASIC1.54□□□□□ -2.16
CCDC83Q8IWF9 AC004223.1-201ENST00000479840 271 ntBASIC1.54□□□□□ -2.16
CCDC83Q8IWF9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC83Q8IWF9 RNU6-358P-201ENST00000516564 75 ntBASIC1.54□□□□□ -2.16
CCDC83Q8IWF9 RNU6-1016P-201ENST00000516689 94 ntBASIC1.54□□□□□ -2.16
CCDC83Q8IWF9 AK6P2-201ENST00000549020 471 ntBASIC1.54□□□□□ -2.16
CCDC83Q8IWF9 AL161670.1-201ENST00000554348 137 ntBASIC1.54□□□□□ -2.16
CCDC83Q8IWF9 AC018462.2-201ENST00000605375 395 ntBASIC1.54□□□□□ -2.16
CCDC83Q8IWF9 AL359821.1-201ENST00000605519 182 ntBASIC1.54□□□□□ -2.16
CCDC83Q8IWF9 AC100812.1-201ENST00000607622 580 ntBASIC1.54□□□□□ -2.16
CCDC83Q8IWF9 MIR302D-201ENST00000362275 68 ntBASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 Y_RNA.72-201ENST00000362894 103 ntBASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 Y_RNA.179-201ENST00000363844 90 ntBASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 Y_RNA.415-201ENST00000384012 112 ntBASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 RNU1-139P-201ENST00000391307 165 ntBASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 MIR548K-201ENST00000408406 116 ntBASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 AL161935.2-201ENST00000414627 60 ntBASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 AL445305.1-201ENST00000432577 575 ntBASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 AC073910.1-201ENST00000445047 438 ntBASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 AC026782.1-201ENST00000512952 449 ntBASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 RNU6-1114P-201ENST00000516022 107 ntBASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 Y_RNA.706-201ENST00000516933 99 ntBASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 CBX3P8-201ENST00000532412 525 ntBASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 AL160236.1-201ENST00000556317 195 ntBASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 AC080078.2-201ENST00000603766 501 ntBASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 PRR13P7-201ENST00000605538 430 ntBASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 AL133216.2-202ENST00000634512 349 ntBASIC1.53□□□□□ -2.16
CCDC83Q8IWF9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.53□□□□□ -2.17
CCDC83Q8IWF9 AC100821.1-201ENST00000523153 2479 ntBASIC1.52□□□□□ -2.17
CCDC83Q8IWF9 Y_RNA.67-201ENST00000362870 100 ntBASIC1.52□□□□□ -2.17
CCDC83Q8IWF9 RNU6-727P-201ENST00000363592 107 ntBASIC1.52□□□□□ -2.17
CCDC83Q8IWF9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.52□□□□□ -2.17
CCDC83Q8IWF9 AC074085.1-201ENST00000413598 418 ntBASIC1.52□□□□□ -2.17
CCDC83Q8IWF9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.52□□□□□ -2.17
CCDC83Q8IWF9 MTND3P23-201ENST00000431980 347 ntBASIC1.52□□□□□ -2.17
CCDC83Q8IWF9 AC245517.4-201ENST00000448601 281 ntBASIC1.52□□□□□ -2.17
CCDC83Q8IWF9 HSPE1P24-201ENST00000450782 238 ntBASIC1.52□□□□□ -2.17
CCDC83Q8IWF9 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.52□□□□□ -2.17
CCDC83Q8IWF9 AC069439.1-201ENST00000494739 167 ntBASIC1.52□□□□□ -2.17
CCDC83Q8IWF9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.52□□□□□ -2.17
CCDC83Q8IWF9 MIR5701-3-201ENST00000578890 82 ntBASIC1.52□□□□□ -2.17
CCDC83Q8IWF9 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.52□□□□□ -2.17
CCDC83Q8IWF9 MIR5701-1-201ENST00000585138 82 ntBASIC1.52□□□□□ -2.17
CCDC83Q8IWF9 AL355802.3-201ENST00000607571 545 ntBASIC1.52□□□□□ -2.17
CCDC83Q8IWF9 AC010999.1-201ENST00000611856 324 ntBASIC1.52□□□□□ -2.17
CCDC83Q8IWF9 MIR5701-2-201ENST00000615634 82 ntBASIC1.52□□□□□ -2.17
CCDC83Q8IWF9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
CCDC83Q8IWF9 ICE2P2-201ENST00000483823 2787 ntBASIC1.51□□□□□ -2.17
CCDC83Q8IWF9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CCDC83Q8IWF9 AL391987.6-201ENST00000305671 199 ntBASIC1.51□□□□□ -2.17
CCDC83Q8IWF9 Y_RNA.4-201ENST00000362333 112 ntBASIC1.51□□□□□ -2.17
CCDC83Q8IWF9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CCDC83Q8IWF9 RNA5SP467-201ENST00000391274 118 ntBASIC1.51□□□□□ -2.17
CCDC83Q8IWF9 COX6CP10-201ENST00000416832 224 ntBASIC1.51□□□□□ -2.17
CCDC83Q8IWF9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.51□□□□□ -2.17
CCDC83Q8IWF9 TRMT112P2-201ENST00000512910 132 ntBASIC1.51□□□□□ -2.17
CCDC83Q8IWF9 AC090821.2-201ENST00000523552 176 ntBASIC1.51□□□□□ -2.17
CCDC83Q8IWF9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.51□□□□□ -2.17
CCDC83Q8IWF9 AL121579.1-201ENST00000555129 305 ntBASIC1.51□□□□□ -2.17
CCDC83Q8IWF9 AC022432.1-201ENST00000595739 310 ntBASIC1.51□□□□□ -2.17
CCDC83Q8IWF9 AL359075.3-201ENST00000613288 217 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms