Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 ZNF885P-201ENST00000420174 1098 ntBASIC1.03□□□□□ -2.24
CDKL3Q8IVW4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.03□□□□□ -2.24
CDKL3Q8IVW4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.03□□□□□ -2.24
CDKL3Q8IVW4 DAP3P1-201ENST00000441522 278 ntBASIC1.03□□□□□ -2.24
CDKL3Q8IVW4 MTCO2P7-201ENST00000446518 666 ntBASIC1.03□□□□□ -2.24
CDKL3Q8IVW4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.03□□□□□ -2.24
CDKL3Q8IVW4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.03□□□□□ -2.24
CDKL3Q8IVW4 MTND1P5-201ENST00000517906 940 ntBASIC1.03□□□□□ -2.24
CDKL3Q8IVW4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.03□□□□□ -2.24
CDKL3Q8IVW4 MIR3672-201ENST00000584290 82 ntBASIC1.03□□□□□ -2.24
CDKL3Q8IVW4 AC136443.5-201ENST00000603741 370 ntBASIC1.03□□□□□ -2.24
CDKL3Q8IVW4 AC103810.9-201ENST00000606688 112 ntBASIC1.03□□□□□ -2.24
CDKL3Q8IVW4 AC097065.2-201ENST00000608159 533 ntBASIC1.03□□□□□ -2.24
CDKL3Q8IVW4 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.03□□□□□ -2.24
CDKL3Q8IVW4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.03□□□□□ -2.24
CDKL3Q8IVW4 snoZ196.1-201ENST00000625269 89 ntBASIC1.03□□□□□ -2.24
CDKL3Q8IVW4 U6.108-201ENST00000637764 58 ntBASIC1.03□□□□□ -2.24
CDKL3Q8IVW4 Y_RNA.135-201ENST00000363439 95 ntBASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 SNORD115-8-201ENST00000363856 82 ntBASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 SNORD115-38-201ENST00000365037 82 ntBASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 RNU6-245P-201ENST00000384020 107 ntBASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 MIR515-2-201ENST00000384883 83 ntBASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 MIR515-1-201ENST00000384884 83 ntBASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 MTND3P21-201ENST00000433774 331 ntBASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 ACA59.1-201ENST00000515966 143 ntBASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 RNA5SP404-201ENST00000517118 132 ntBASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 RNU6-58P-201ENST00000517143 103 ntBASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 AC109635.3-201ENST00000529536 185 ntBASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 AK6P2-201ENST00000549020 471 ntBASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 MIR4709-201ENST00000577272 72 ntBASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 SNORD11B-201ENST00000607707 90 ntBASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 AC019193.3-201ENST00000609144 554 ntBASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 AC015540.1-201ENST00000615828 501 ntBASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 AL133216.2-202ENST00000634512 349 ntBASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 AC024614.3-201ENST00000637860 256 ntBASIC1.02□□□□□ -2.25
CDKL3Q8IVW4 Y_RNA.100-201ENST00000363141 102 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 SNORD115-32-201ENST00000364079 82 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 Y_RNA.212-201ENST00000364177 102 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 Y_RNA.319-201ENST00000365138 92 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 SNORD114-22-201ENST00000365423 72 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 Y_RNA.414-201ENST00000384011 101 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 MIR153-2-201ENST00000385225 87 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 RNA5SP323-201ENST00000391094 133 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 RNA5SP467-201ENST00000391274 118 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 AL356776.1-201ENST00000406574 447 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 AC016907.1-201ENST00000419483 435 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 AL445305.1-201ENST00000432577 575 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 MTATP6P26-201ENST00000445926 662 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 RPS27P1-201ENST00000450552 247 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 RNU7-34P-201ENST00000459394 64 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 snoU13.18-201ENST00000459483 104 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 SNORA25.14-201ENST00000516481 132 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 RNU6-1198P-201ENST00000516904 67 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 AC025647.1-201ENST00000517879 253 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 TPRKBP2-201ENST00000565969 475 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 SNORA4-201ENST00000584302 138 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 AC080078.3-201ENST00000605407 463 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 AC124303.1-201ENST00000605703 360 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
CDKL3Q8IVW4 MIR96-201ENST00000362288 78 ntBASIC1□□□□□ -2.25
CDKL3Q8IVW4 SNORD87-201ENST00000364849 89 ntBASIC1□□□□□ -2.25
CDKL3Q8IVW4 RNU6-534P-201ENST00000364877 106 ntBASIC1□□□□□ -2.25
CDKL3Q8IVW4 Y_RNA.402-201ENST00000383972 102 ntBASIC1□□□□□ -2.25
CDKL3Q8IVW4 Y_RNA.436-201ENST00000384097 102 ntBASIC1□□□□□ -2.25
CDKL3Q8IVW4 RNY1P14-201ENST00000384426 108 ntBASIC1□□□□□ -2.25
CDKL3Q8IVW4 MIR181A1-201ENST00000385026 110 ntBASIC1□□□□□ -2.25
CDKL3Q8IVW4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1□□□□□ -2.25
CDKL3Q8IVW4 RNA5SP109-201ENST00000391010 116 ntBASIC1□□□□□ -2.25
CDKL3Q8IVW4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1□□□□□ -2.25
CDKL3Q8IVW4 RPL21P1-201ENST00000399532 476 ntBASIC1□□□□□ -2.25
CDKL3Q8IVW4 AC008134.1-201ENST00000420943 193 ntBASIC1□□□□□ -2.25
CDKL3Q8IVW4 SNX2P2-201ENST00000424553 323 ntBASIC1□□□□□ -2.25
CDKL3Q8IVW4 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1□□□□□ -2.25
CDKL3Q8IVW4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1□□□□□ -2.25
CDKL3Q8IVW4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1□□□□□ -2.25
CDKL3Q8IVW4 RNU6-221P-201ENST00000459541 99 ntBASIC1□□□□□ -2.25
CDKL3Q8IVW4 COX6CP14-201ENST00000469580 174 ntBASIC1□□□□□ -2.25
CDKL3Q8IVW4 HMGN1P12-201ENST00000499125 195 ntBASIC1□□□□□ -2.25
CDKL3Q8IVW4 AC024995.1-201ENST00000523014 93 ntBASIC1□□□□□ -2.25
CDKL3Q8IVW4 AC027288.2-201ENST00000553028 243 ntBASIC1□□□□□ -2.25
CDKL3Q8IVW4 AL442163.3-201ENST00000554110 156 ntBASIC1□□□□□ -2.25
CDKL3Q8IVW4 AC080013.6-201ENST00000606185 215 ntBASIC1□□□□□ -2.25
CDKL3Q8IVW4 MTND4P12-201ENST00000498999 1377 ntBASIC0.99□□□□□ -2.25
CDKL3Q8IVW4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CDKL3Q8IVW4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CDKL3Q8IVW4 RNU6-873P-201ENST00000363833 107 ntBASIC0.99□□□□□ -2.25
CDKL3Q8IVW4 RNU6-1240P-201ENST00000365155 104 ntBASIC0.99□□□□□ -2.25
CDKL3Q8IVW4 SNORD116-11-201ENST00000383882 92 ntBASIC0.99□□□□□ -2.25
CDKL3Q8IVW4 RNU6-306P-201ENST00000384617 107 ntBASIC0.99□□□□□ -2.25
CDKL3Q8IVW4 MIR489-201ENST00000384923 84 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms