Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 U6.90-201ENST00000614007 104 ntBASIC-1.35□□□□□ -2.63
LINC00643Q86TS7 AC005562.2-201ENST00000618264 111 ntBASIC-1.35□□□□□ -2.63
LINC00643Q86TS7 U6.70-201ENST00000620287 104 ntBASIC-1.35□□□□□ -2.63
LINC00643Q86TS7 MIR4251-201ENST00000635819 61 ntBASIC-1.35□□□□□ -2.63
LINC00643Q86TS7 U3.4-201ENST00000363352 213 ntBASIC-1.36□□□□□ -2.63
LINC00643Q86TS7 SNORD45.3-201ENST00000363836 72 ntBASIC-1.36□□□□□ -2.63
LINC00643Q86TS7 RNU6-1305P-201ENST00000364353 104 ntBASIC-1.36□□□□□ -2.63
LINC00643Q86TS7 RNU6-946P-201ENST00000383878 107 ntBASIC-1.36□□□□□ -2.63
LINC00643Q86TS7 RNU6-364P-201ENST00000384387 107 ntBASIC-1.36□□□□□ -2.63
LINC00643Q86TS7 MIR578-201ENST00000384828 96 ntBASIC-1.36□□□□□ -2.63
LINC00643Q86TS7 RN7SKP142-201ENST00000411236 328 ntBASIC-1.36□□□□□ -2.63
LINC00643Q86TS7 AC109327.2-201ENST00000448339 378 ntBASIC-1.36□□□□□ -2.63
LINC00643Q86TS7 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-1.36□□□□□ -2.63
LINC00643Q86TS7 AC087894.1-201ENST00000538359 518 ntBASIC-1.36□□□□□ -2.63
LINC00643Q86TS7 AP002802.2-201ENST00000605877 235 ntBASIC-1.36□□□□□ -2.63
LINC00643Q86TS7 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.36□□□□□ -2.63
LINC00643Q86TS7 RNU4-21P-201ENST00000362802 126 ntBASIC-1.37□□□□□ -2.63
LINC00643Q86TS7 RNU6-650P-201ENST00000365658 111 ntBASIC-1.37□□□□□ -2.63
LINC00643Q86TS7 RNU6-1184P-201ENST00000384588 108 ntBASIC-1.37□□□□□ -2.63
LINC00643Q86TS7 RNU6-1093P-201ENST00000391194 107 ntBASIC-1.37□□□□□ -2.63
LINC00643Q86TS7 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC-1.37□□□□□ -2.63
LINC00643Q86TS7 AC079781.2-201ENST00000446424 169 ntBASIC-1.37□□□□□ -2.63
LINC00643Q86TS7 AC116562.3-201ENST00000506136 177 ntBASIC-1.37□□□□□ -2.63
LINC00643Q86TS7 RNU1-29P-201ENST00000606574 126 ntBASIC-1.37□□□□□ -2.63
LINC00643Q86TS7 AL139022.2-201ENST00000606934 443 ntBASIC-1.37□□□□□ -2.63
LINC00643Q86TS7 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.38□□□□□ -2.63
LINC00643Q86TS7 MIR586-201ENST00000385035 97 ntBASIC-1.38□□□□□ -2.63
LINC00643Q86TS7 SNORA26.5-201ENST00000391215 123 ntBASIC-1.38□□□□□ -2.63
LINC00643Q86TS7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-1.38□□□□□ -2.63
LINC00643Q86TS7 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-1.38□□□□□ -2.63
LINC00643Q86TS7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.38□□□□□ -2.63
LINC00643Q86TS7 RNU6-221P-201ENST00000459541 99 ntBASIC-1.38□□□□□ -2.63
LINC00643Q86TS7 RNU6-448P-201ENST00000517052 107 ntBASIC-1.38□□□□□ -2.63
LINC00643Q86TS7 MIR5006-201ENST00000583027 110 ntBASIC-1.38□□□□□ -2.63
LINC00643Q86TS7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-1.38□□□□□ -2.63
LINC00643Q86TS7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC-1.38□□□□□ -2.63
LINC00643Q86TS7 AC091304.10-201ENST00000641554 121 ntBASIC-1.38□□□□□ -2.63
LINC00643Q86TS7 RNY1P7-201ENST00000384743 110 ntBASIC-1.39□□□□□ -2.63
LINC00643Q86TS7 MT-TN-201ENST00000387400 73 ntBASIC-1.39□□□□□ -2.63
LINC00643Q86TS7 SNORA75.1-201ENST00000391130 148 ntBASIC-1.39□□□□□ -2.63
LINC00643Q86TS7 AC244250.2-201ENST00000418731 148 ntBASIC-1.39□□□□□ -2.63
LINC00643Q86TS7 AC004386.2-201ENST00000441858 148 ntBASIC-1.39□□□□□ -2.63
LINC00643Q86TS7 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-1.39□□□□□ -2.63
LINC00643Q86TS7 AL158032.1-201ENST00000605401 106 ntBASIC-1.39□□□□□ -2.63
LINC00643Q86TS7 AC100814.1-201ENST00000606963 623 ntBASIC-1.39□□□□□ -2.63
LINC00643Q86TS7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.39□□□□□ -2.63
LINC00643Q86TS7 MIR6715A-201ENST00000615929 79 ntBASIC-1.39□□□□□ -2.63
LINC00643Q86TS7 MIR655-201ENST00000362159 97 ntBASIC-1.4□□□□□ -2.63
LINC00643Q86TS7 RPL23AP30-201ENST00000432419 501 ntBASIC-1.4□□□□□ -2.63
LINC00643Q86TS7 RNU6-123P-201ENST00000516163 102 ntBASIC-1.4□□□□□ -2.63
LINC00643Q86TS7 RNU6-58P-201ENST00000517143 103 ntBASIC-1.4□□□□□ -2.63
LINC00643Q86TS7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-1.4□□□□□ -2.63
LINC00643Q86TS7 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-1.4□□□□□ -2.63
LINC00643Q86TS7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-1.4□□□□□ -2.63
LINC00643Q86TS7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-1.4□□□□□ -2.63
LINC00643Q86TS7 EIF1AXP2-201ENST00000555940 413 ntBASIC-1.4□□□□□ -2.63
LINC00643Q86TS7 MIR3925-201ENST00000584674 77 ntBASIC-1.4□□□□□ -2.63
LINC00643Q86TS7 AC125232.2-201ENST00000592457 143 ntBASIC-1.4□□□□□ -2.63
LINC00643Q86TS7 MIR6759-201ENST00000638110 65 ntBASIC-1.4□□□□□ -2.63
LINC00643Q86TS7 SNORA36A-201ENST00000384221 132 ntBASIC-1.41□□□□□ -2.64
LINC00643Q86TS7 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.41□□□□□ -2.64
LINC00643Q86TS7 MIR516B2-201ENST00000385190 85 ntBASIC-1.41□□□□□ -2.64
LINC00643Q86TS7 RNU6-205P-201ENST00000390858 107 ntBASIC-1.41□□□□□ -2.64
LINC00643Q86TS7 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-1.41□□□□□ -2.64
LINC00643Q86TS7 AL365184.2-201ENST00000431139 435 ntBASIC-1.41□□□□□ -2.64
LINC00643Q86TS7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.41□□□□□ -2.64
LINC00643Q86TS7 AP000542.1-201ENST00000448473 371 ntBASIC-1.41□□□□□ -2.64
LINC00643Q86TS7 RNU2-12P-201ENST00000517216 168 ntBASIC-1.41□□□□□ -2.64
LINC00643Q86TS7 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-1.41□□□□□ -2.64
LINC00643Q86TS7 AC008521.1-201ENST00000587471 187 ntBASIC-1.41□□□□□ -2.64
LINC00643Q86TS7 AC245008.1-201ENST00000608123 476 ntBASIC-1.41□□□□□ -2.64
LINC00643Q86TS7 TCL6_2.1-201ENST00000615162 119 ntBASIC-1.41□□□□□ -2.64
LINC00643Q86TS7 AL359547.2-201ENST00000615810 418 ntBASIC-1.41□□□□□ -2.64
LINC00643Q86TS7 PVT1_3.1-201ENST00000620853 95 ntBASIC-1.41□□□□□ -2.64
LINC00643Q86TS7 AC027279.3-201ENST00000625055 122 ntBASIC-1.41□□□□□ -2.64
LINC00643Q86TS7 SCARNA4-201ENST00000629045 128 ntBASIC-1.41□□□□□ -2.64
LINC00643Q86TS7 MTND5P32-201ENST00000560711 1802 ntBASIC-1.41□□□□□ -2.64
LINC00643Q86TS7 U8.5-201ENST00000364528 136 ntBASIC-1.42□□□□□ -2.64
LINC00643Q86TS7 Y_RNA.280-201ENST00000364765 112 ntBASIC-1.42□□□□□ -2.64
LINC00643Q86TS7 Y_RNA.504-201ENST00000384481 104 ntBASIC-1.42□□□□□ -2.64
LINC00643Q86TS7 MIR15B-201ENST00000385045 98 ntBASIC-1.42□□□□□ -2.64
LINC00643Q86TS7 MIR136-201ENST00000385207 82 ntBASIC-1.42□□□□□ -2.64
LINC00643Q86TS7 MIR1298-201ENST00000408783 112 ntBASIC-1.42□□□□□ -2.64
LINC00643Q86TS7 AC012306.1-201ENST00000423267 114 ntBASIC-1.42□□□□□ -2.64
LINC00643Q86TS7 AL360271.2-201ENST00000447710 161 ntBASIC-1.42□□□□□ -2.64
LINC00643Q86TS7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-1.42□□□□□ -2.64
LINC00643Q86TS7 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-1.42□□□□□ -2.64
LINC00643Q86TS7 RNU6-377P-201ENST00000515965 102 ntBASIC-1.42□□□□□ -2.64
LINC00643Q86TS7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-1.42□□□□□ -2.64
LINC00643Q86TS7 AC026470.2-201ENST00000561492 181 ntBASIC-1.42□□□□□ -2.64
LINC00643Q86TS7 AL355375.2-201ENST00000574825 175 ntBASIC-1.42□□□□□ -2.64
LINC00643Q86TS7 MIR4493-201ENST00000584016 73 ntBASIC-1.42□□□□□ -2.64
LINC00643Q86TS7 AC104984.5-201ENST00000586878 94 ntBASIC-1.42□□□□□ -2.64
LINC00643Q86TS7 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.42□□□□□ -2.64
LINC00643Q86TS7 AC120024.3-201ENST00000603167 156 ntBASIC-1.42□□□□□ -2.64
LINC00643Q86TS7 AC004987.4-201ENST00000603383 338 ntBASIC-1.42□□□□□ -2.64
LINC00643Q86TS7 Six3os1_7.1-201ENST00000621512 201 ntBASIC-1.42□□□□□ -2.64
LINC00643Q86TS7 AC099786.3-201ENST00000565735 1410 ntBASIC-1.42□□□□□ -2.64
LINC00643Q86TS7 Y_RNA.4-201ENST00000362333 112 ntBASIC-1.43□□□□□ -2.64
LINC00643Q86TS7 SNORA1B-201ENST00000362535 133 ntBASIC-1.43□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms