Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 SNORA25.1-201ENST00000362326 128 ntBASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 Y_RNA.20-201ENST00000362479 113 ntBASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 Y_RNA.277-201ENST00000364754 102 ntBASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 Y_RNA.539-201ENST00000384635 107 ntBASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 MIR561-201ENST00000385216 97 ntBASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 AL357139.1-201ENST00000407792 426 ntBASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 RNU2-48P-201ENST00000410694 191 ntBASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 RNU6-847P-201ENST00000411115 108 ntBASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 MTCO1P5-201ENST00000433573 344 ntBASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 AC016717.1-201ENST00000448918 286 ntBASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 AC016925.1-201ENST00000458303 298 ntBASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 RNU7-57P-201ENST00000459540 60 ntBASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 AC114982.1-201ENST00000469402 321 ntBASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 RNU6-111P-201ENST00000517179 105 ntBASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 MIR4325-201ENST00000583049 90 ntBASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 MIR4635-201ENST00000583759 79 ntBASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 SNORD14A-201ENST00000606526 91 ntBASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 MIR203B-201ENST00000636080 86 ntBASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
PTCHD4Q6ZW05 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 MIR6073-201ENST00000352083 89 ntBASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 Y_RNA.44-201ENST00000362676 108 ntBASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 RNU6-324P-201ENST00000363957 106 ntBASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 RNU6-514P-201ENST00000384208 107 ntBASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 RNU6-975P-201ENST00000384296 105 ntBASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 SNORD14D-201ENST00000384390 87 ntBASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 MIR1185-2-201ENST00000408687 86 ntBASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 U3.40-201ENST00000408706 208 ntBASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 RNA5SP181-201ENST00000410246 98 ntBASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 AC074290.1-201ENST00000448883 135 ntBASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 AC018868.1-201ENST00000491307 315 ntBASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 RNU6-991P-201ENST00000516168 107 ntBASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 RNA5SP82-201ENST00000516707 92 ntBASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 AC022080.3-201ENST00000544433 482 ntBASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 RPL21P9-201ENST00000556149 474 ntBASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 MIR3944-201ENST00000581277 108 ntBASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 MIR3668-201ENST00000582138 75 ntBASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 DEFB117-201ENST00000602356 141 ntBASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 MIR6895-201ENST00000613497 78 ntBASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
PTCHD4Q6ZW05 Y_RNA.136-201ENST00000363444 102 ntBASIC2.41□□□□□ -2.02
PTCHD4Q6ZW05 SNORD115-30-201ENST00000364117 82 ntBASIC2.41□□□□□ -2.02
PTCHD4Q6ZW05 RNU1-112P-201ENST00000364401 164 ntBASIC2.41□□□□□ -2.02
PTCHD4Q6ZW05 Y_RNA.257-201ENST00000364596 102 ntBASIC2.41□□□□□ -2.02
PTCHD4Q6ZW05 Y_RNA.329-201ENST00000365209 107 ntBASIC2.41□□□□□ -2.02
PTCHD4Q6ZW05 RNU6-418P-201ENST00000384035 107 ntBASIC2.41□□□□□ -2.02
PTCHD4Q6ZW05 Y_RNA.552-201ENST00000384665 112 ntBASIC2.41□□□□□ -2.02
PTCHD4Q6ZW05 RNU6-436P-201ENST00000516171 114 ntBASIC2.41□□□□□ -2.02
PTCHD4Q6ZW05 RNU6-667P-201ENST00000517186 102 ntBASIC2.41□□□□□ -2.02
PTCHD4Q6ZW05 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.41□□□□□ -2.02
PTCHD4Q6ZW05 MIR5195-201ENST00000583555 115 ntBASIC2.41□□□□□ -2.02
PTCHD4Q6ZW05 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.41□□□□□ -2.02
PTCHD4Q6ZW05 AC025754.2-201ENST00000606491 432 ntBASIC2.41□□□□□ -2.02
PTCHD4Q6ZW05 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.41□□□□□ -2.02
PTCHD4Q6ZW05 snoZ196.1-201ENST00000625269 89 ntBASIC2.41□□□□□ -2.02
PTCHD4Q6ZW05 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
PTCHD4Q6ZW05 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PTCHD4Q6ZW05 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
PTCHD4Q6ZW05 Y_RNA.65-201ENST00000362846 100 ntBASIC2.4□□□□□ -2.03
PTCHD4Q6ZW05 RNU4-80P-201ENST00000363200 141 ntBASIC2.4□□□□□ -2.03
PTCHD4Q6ZW05 SNORA3A-201ENST00000364113 130 ntBASIC2.4□□□□□ -2.03
PTCHD4Q6ZW05 SNORD46.1-201ENST00000364139 104 ntBASIC2.4□□□□□ -2.03
PTCHD4Q6ZW05 RNU6-338P-201ENST00000383888 105 ntBASIC2.4□□□□□ -2.03
PTCHD4Q6ZW05 SNORA44-201ENST00000384584 132 ntBASIC2.4□□□□□ -2.03
PTCHD4Q6ZW05 AL138827.1-201ENST00000402666 306 ntBASIC2.4□□□□□ -2.03
PTCHD4Q6ZW05 RNU6-57P-201ENST00000411348 103 ntBASIC2.4□□□□□ -2.03
PTCHD4Q6ZW05 AL135938.1-201ENST00000443141 297 ntBASIC2.4□□□□□ -2.03
PTCHD4Q6ZW05 S100A11P2-201ENST00000467589 312 ntBASIC2.4□□□□□ -2.03
PTCHD4Q6ZW05 AC091959.1-201ENST00000495857 238 ntBASIC2.4□□□□□ -2.03
PTCHD4Q6ZW05 AC079600.2-201ENST00000550076 130 ntBASIC2.4□□□□□ -2.03
PTCHD4Q6ZW05 MIR4643-201ENST00000577473 78 ntBASIC2.4□□□□□ -2.03
PTCHD4Q6ZW05 MIR5092-201ENST00000583139 88 ntBASIC2.4□□□□□ -2.03
PTCHD4Q6ZW05 BX284668.6-201ENST00000606899 438 ntBASIC2.4□□□□□ -2.03
PTCHD4Q6ZW05 AC141273.2-201ENST00000618989 130 ntBASIC2.4□□□□□ -2.03
PTCHD4Q6ZW05 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.4□□□□□ -2.03
PTCHD4Q6ZW05 U6.115-201ENST00000636045 103 ntBASIC2.4□□□□□ -2.03
PTCHD4Q6ZW05 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PTCHD4Q6ZW05 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PTCHD4Q6ZW05 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.39□□□□□ -2.03
PTCHD4Q6ZW05 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
PTCHD4Q6ZW05 MIR208A-201ENST00000362287 71 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms