Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RNU6-545P-201ENST00000362681 104 ntBASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 SNORD114-1-201ENST00000362705 72 ntBASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 Y_RNA.133-201ENST00000363428 110 ntBASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-574P-201ENST00000384265 107 ntBASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-1235P-201ENST00000384559 107 ntBASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 MIR568-201ENST00000385036 95 ntBASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 MIR30A-201ENST00000385092 71 ntBASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-1050P-201ENST00000410388 107 ntBASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 RNU2-7P-201ENST00000410794 178 ntBASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 MTND4P19-201ENST00000446659 478 ntBASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 CHEK2P4-201ENST00000450340 246 ntBASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-498P-201ENST00000459468 107 ntBASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 RPL36AP21-201ENST00000490372 323 ntBASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 AF186996.7-201ENST00000492781 209 ntBASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-1045P-201ENST00000516321 107 ntBASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 RNVU1-2-201ENST00000516326 135 ntBASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-856P-201ENST00000516959 98 ntBASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 RRN3P3-201ENST00000549207 578 ntBASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 SUB1P4-201ENST00000566062 339 ntBASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.74□□□□□ -2.13
NHLRC1Q6VVB1 Y_RNA.28-201ENST00000362554 111 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-280P-201ENST00000364145 104 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 SNORA72.2-201ENST00000365028 127 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 RNY1P14-201ENST00000384426 108 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 MIR515-2-201ENST00000384883 83 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 MIR515-1-201ENST00000384884 83 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 MIR586-201ENST00000385035 97 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 Y_RNA.645-201ENST00000391229 102 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 SNORA75.6-201ENST00000391318 127 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 MCFD2P1-201ENST00000417812 300 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 AC010531.2-201ENST00000465012 153 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 AC008834.1-201ENST00000511612 175 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-344P-201ENST00000516635 111 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-699P-201ENST00000517081 110 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-548P-201ENST00000517083 115 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 RN7SKP295-201ENST00000517264 153 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 MIR5094-201ENST00000578766 85 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 MIR4680-201ENST00000580906 66 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 AC136443.5-201ENST00000603741 370 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 AL355802.3-201ENST00000607571 545 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 AC009318.2-201ENST00000610917 651 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 AL078596.1-201ENST00000624856 447 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 MTND5P10-201ENST00000603719 1809 ntBASIC1.73□□□□□ -2.13
NHLRC1Q6VVB1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 Y_RNA.48-201ENST00000362710 103 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 Y_RNA.80-201ENST00000362996 102 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-414P-201ENST00000363705 104 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 SNORD115-8-201ENST00000363856 82 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-593P-201ENST00000364716 112 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 SNORD115-38-201ENST00000365037 82 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 Y_RNA.485-201ENST00000384395 102 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 RNU6-1105P-201ENST00000384774 107 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 MIR520A-201ENST00000384862 85 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 MIR32-201ENST00000384965 70 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 SNORA12.2-201ENST00000391040 156 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 MIR1289-2-201ENST00000408360 111 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 MIR548F4-201ENST00000408515 105 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 Y_RNA.605-201ENST00000410577 105 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 RNA5SP100-201ENST00000410903 110 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 RNA5SP59-201ENST00000410922 110 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 AL358453.1-201ENST00000422522 250 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 AL358176.2-201ENST00000425769 204 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 snoU13.30-201ENST00000458951 104 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 HMGB3P17-201ENST00000504195 649 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 RNA5SP481-201ENST00000516814 122 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 Y_RNA.708-201ENST00000516950 96 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 HSBP1P1-201ENST00000555205 166 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 MIR5690-201ENST00000583739 73 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 AC008737.2-201ENST00000599446 118 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 ZNF204P-201ENST00000416749 2397 ntBASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
NHLRC1Q6VVB1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.13
NHLRC1Q6VVB1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.71□□□□□ -2.14
NHLRC1Q6VVB1 SNORD50.1-201ENST00000362987 71 ntBASIC1.71□□□□□ -2.14
NHLRC1Q6VVB1 RNU6-1305P-201ENST00000364353 104 ntBASIC1.71□□□□□ -2.14
NHLRC1Q6VVB1 RNU6-1019P-201ENST00000364424 107 ntBASIC1.71□□□□□ -2.14
NHLRC1Q6VVB1 Y_RNA.252-201ENST00000364556 101 ntBASIC1.71□□□□□ -2.14
NHLRC1Q6VVB1 RNU6-596P-201ENST00000365395 98 ntBASIC1.71□□□□□ -2.14
NHLRC1Q6VVB1 RNU6-174P-201ENST00000410406 106 ntBASIC1.71□□□□□ -2.14
NHLRC1Q6VVB1 USMG5P1-201ENST00000425964 177 ntBASIC1.71□□□□□ -2.14
NHLRC1Q6VVB1 MTCO3P29-201ENST00000432119 779 ntBASIC1.71□□□□□ -2.14
NHLRC1Q6VVB1 MTND3P2-201ENST00000438452 342 ntBASIC1.71□□□□□ -2.14
NHLRC1Q6VVB1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.71□□□□□ -2.14
NHLRC1Q6VVB1 MTCO3P8-201ENST00000453691 755 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms