Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RNU6-454P-201ENST00000364292 107 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 Y_RNA.270-201ENST00000364693 104 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 RNU1-51P-201ENST00000365345 176 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 Y_RNA.415-201ENST00000384012 112 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 RNU6-662P-201ENST00000384253 104 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 Y_RNA.464-201ENST00000384282 110 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 RNU6-493P-201ENST00000391321 108 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 AL139095.1-201ENST00000404326 391 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 RNU2-61P-201ENST00000411069 191 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 AC009414.1-201ENST00000427200 443 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 Y_RNA.638-201ENST00000459374 113 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 AC026436.1-201ENST00000510537 270 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 RNU6-191P-201ENST00000516295 94 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 RNU6-406P-201ENST00000516470 107 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 AC022559.1-201ENST00000520905 205 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 AP002392.1-201ENST00000537692 208 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 AC079598.5-201ENST00000547460 117 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 EIF4A1P12-201ENST00000551910 141 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 MIR3145-201ENST00000580727 82 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 Z83818.1-201ENST00000603584 150 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 AC037487.3-201ENST00000606668 112 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 AC002064.3-201ENST00000623448 346 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 RNU6-545P-201ENST00000362681 104 ntBASIC2.36□□□□□ -2.03
ZNF549Q6P9A3 RNU4-80P-201ENST00000363200 141 ntBASIC2.36□□□□□ -2.03
ZNF549Q6P9A3 RNU6-1210P-201ENST00000363775 107 ntBASIC2.36□□□□□ -2.03
ZNF549Q6P9A3 SNORA67.2-201ENST00000384300 149 ntBASIC2.36□□□□□ -2.03
ZNF549Q6P9A3 MIR147B-201ENST00000390185 80 ntBASIC2.36□□□□□ -2.03
ZNF549Q6P9A3 SNORA46.1-201ENST00000391069 153 ntBASIC2.36□□□□□ -2.03
ZNF549Q6P9A3 RNU6-918P-201ENST00000391219 106 ntBASIC2.36□□□□□ -2.03
ZNF549Q6P9A3 MIR548M-201ENST00000408260 86 ntBASIC2.36□□□□□ -2.03
ZNF549Q6P9A3 RNU2-54P-201ENST00000410299 190 ntBASIC2.36□□□□□ -2.03
ZNF549Q6P9A3 RNA5SP492-201ENST00000411330 114 ntBASIC2.36□□□□□ -2.03
ZNF549Q6P9A3 COX6CP10-201ENST00000416832 224 ntBASIC2.36□□□□□ -2.03
ZNF549Q6P9A3 AC112771.1-201ENST00000463581 102 ntBASIC2.36□□□□□ -2.03
ZNF549Q6P9A3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.36□□□□□ -2.03
ZNF549Q6P9A3 AC074198.2-201ENST00000508153 258 ntBASIC2.36□□□□□ -2.03
ZNF549Q6P9A3 RNA5SP402-201ENST00000517148 110 ntBASIC2.36□□□□□ -2.03
ZNF549Q6P9A3 RNU2-12P-201ENST00000517216 168 ntBASIC2.36□□□□□ -2.03
ZNF549Q6P9A3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.36□□□□□ -2.03
ZNF549Q6P9A3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.36□□□□□ -2.03
ZNF549Q6P9A3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.36□□□□□ -2.03
ZNF549Q6P9A3 UCA1.1-201ENST00000620952 75 ntBASIC2.36□□□□□ -2.03
ZNF549Q6P9A3 MIR1291-201ENST00000627649 87 ntBASIC2.36□□□□□ -2.03
ZNF549Q6P9A3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
ZNF549Q6P9A3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 AL136360.1-201ENST00000503377 1900 ntBASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 RNU4-56P-201ENST00000364700 142 ntBASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 Y_RNA.498-201ENST00000384460 102 ntBASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 RNU1-57P-201ENST00000384491 166 ntBASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 Y_RNA.590-201ENST00000410140 107 ntBASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 AC104389.3-201ENST00000445629 235 ntBASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 Z96811.1-201ENST00000445880 108 ntBASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 RPL31P41-201ENST00000477967 372 ntBASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 AC145146.1-201ENST00000496370 254 ntBASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 RNU6-344P-201ENST00000516635 111 ntBASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 RNU6-861P-201ENST00000516745 106 ntBASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 SNORA31.15-201ENST00000516771 132 ntBASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 AC109329.2-201ENST00000519658 482 ntBASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 MIR4672-201ENST00000583126 81 ntBASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 SNRPGP20-201ENST00000604477 205 ntBASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 AC103810.6-201ENST00000606708 136 ntBASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 AC046143.2-201ENST00000609789 160 ntBASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 MIR3674-201ENST00000636576 68 ntBASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
ZNF549Q6P9A3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
ZNF549Q6P9A3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
ZNF549Q6P9A3 RNU6-655P-201ENST00000362858 107 ntBASIC2.34□□□□□ -2.03
ZNF549Q6P9A3 RNU6-774P-201ENST00000363238 107 ntBASIC2.34□□□□□ -2.03
ZNF549Q6P9A3 U3.9-201ENST00000363823 204 ntBASIC2.34□□□□□ -2.03
ZNF549Q6P9A3 RNU1-109P-201ENST00000383960 147 ntBASIC2.34□□□□□ -2.03
ZNF549Q6P9A3 RNU6-514P-201ENST00000384208 107 ntBASIC2.34□□□□□ -2.03
ZNF549Q6P9A3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
ZNF549Q6P9A3 AC004386.2-201ENST00000441858 148 ntBASIC2.34□□□□□ -2.03
ZNF549Q6P9A3 AL441985.1-201ENST00000457727 251 ntBASIC2.34□□□□□ -2.03
ZNF549Q6P9A3 RNY3P16-201ENST00000516338 101 ntBASIC2.34□□□□□ -2.03
ZNF549Q6P9A3 AC087441.2-201ENST00000529141 262 ntBASIC2.34□□□□□ -2.03
ZNF549Q6P9A3 MIR4308-201ENST00000580634 81 ntBASIC2.34□□□□□ -2.03
ZNF549Q6P9A3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.34□□□□□ -2.03
ZNF549Q6P9A3 DEFB117-201ENST00000602356 141 ntBASIC2.34□□□□□ -2.03
ZNF549Q6P9A3 AC005828.6-201ENST00000606610 232 ntBASIC2.34□□□□□ -2.03
ZNF549Q6P9A3 uc_338.14-201ENST00000613162 166 ntBASIC2.34□□□□□ -2.03
ZNF549Q6P9A3 TCL6_2.1-201ENST00000615162 119 ntBASIC2.34□□□□□ -2.03
ZNF549Q6P9A3 AC005562.2-201ENST00000618264 111 ntBASIC2.34□□□□□ -2.03
ZNF549Q6P9A3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
ZNF549Q6P9A3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
ZNF549Q6P9A3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.04
ZNF549Q6P9A3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 200.9 ms