Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
E4F1Q66K89 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.08□□□□□ -1.92
E4F1Q66K89 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.08□□□□□ -1.92
E4F1Q66K89 SNORA25.6-201ENST00000364121 118 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 RNU6-743P-201ENST00000364151 106 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 SNORD21-201ENST00000383953 95 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 RNU6-187P-201ENST00000384139 106 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 SNORA48.5-201ENST00000391143 135 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 RNU2-2P-201ENST00000410396 191 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.08□□□□□ -1.92
E4F1Q66K89 AC091021.1-201ENST00000468051 388 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 SNORA9.3-201ENST00000516383 129 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 AC027419.1-201ENST00000522976 328 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
E4F1Q66K89 RNU2-4P-201ENST00000606190 192 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 U2.15-201ENST00000611544 191 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 U2.16-201ENST00000613119 191 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 U2.12-201ENST00000613778 191 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 U2.9-201ENST00000615427 191 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 AL078604.3-201ENST00000615580 211 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 U2.11-201ENST00000616345 191 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 U2.2-201ENST00000616535 191 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 AC013791.1-201ENST00000616619 62 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 U2.3-201ENST00000617785 191 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 U2.19-201ENST00000618602 191 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 RNU2-1-201ENST00000618664 191 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 U2.6-201ENST00000619225 191 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 U2.5-201ENST00000619465 191 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 MIR5739-201ENST00000619803 80 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 U2.10-201ENST00000620268 191 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 snoZ196.1-201ENST00000625269 89 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 MIR3651-201ENST00000630427 90 ntBASIC3.08□□□□□ -1.92
E4F1Q66K89 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
E4F1Q66K89 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
E4F1Q66K89 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
E4F1Q66K89 Y_RNA.124-201ENST00000363339 93 ntBASIC3.07□□□□□ -1.92
E4F1Q66K89 SNORA68.1-201ENST00000364537 132 ntBASIC3.07□□□□□ -1.92
E4F1Q66K89 SNORD31B-201ENST00000364977 69 ntBASIC3.07□□□□□ -1.92
E4F1Q66K89 Y_RNA.435-201ENST00000384095 112 ntBASIC3.07□□□□□ -1.92
E4F1Q66K89 SNORA72.4-201ENST00000384174 132 ntBASIC3.07□□□□□ -1.92
E4F1Q66K89 Y_RNA.571-201ENST00000384753 98 ntBASIC3.07□□□□□ -1.92
E4F1Q66K89 MIR670-201ENST00000390142 98 ntBASIC3.07□□□□□ -1.92
E4F1Q66K89 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.07□□□□□ -1.92
E4F1Q66K89 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.07□□□□□ -1.92
E4F1Q66K89 RPS20P10-201ENST00000451209 253 ntBASIC3.07□□□□□ -1.92
E4F1Q66K89 PRSS3P4-201ENST00000453323 162 ntBASIC3.07□□□□□ -1.92
E4F1Q66K89 BX510359.1-201ENST00000456973 237 ntBASIC3.07□□□□□ -1.92
E4F1Q66K89 AC023141.11-201ENST00000508864 202 ntBASIC3.07□□□□□ -1.92
E4F1Q66K89 Y_RNA.703-201ENST00000516846 111 ntBASIC3.07□□□□□ -1.92
E4F1Q66K89 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
E4F1Q66K89 MIR3605-201ENST00000583214 100 ntBASIC3.07□□□□□ -1.92
E4F1Q66K89 AC025754.2-201ENST00000606491 432 ntBASIC3.07□□□□□ -1.92
E4F1Q66K89 AC013412.1-201ENST00000610687 192 ntBASIC3.07□□□□□ -1.92
E4F1Q66K89 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
E4F1Q66K89 AC084757.4-201ENST00000616350 526 ntBASIC3.07□□□□□ -1.92
E4F1Q66K89 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.07□□□□□ -1.92
E4F1Q66K89 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
E4F1Q66K89 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.07□□□□□ -1.92
E4F1Q66K89 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
E4F1Q66K89 Y_RNA.7-201ENST00000362352 102 ntBASIC3.06□□□□□ -1.92
E4F1Q66K89 RNU4-10P-201ENST00000364383 140 ntBASIC3.06□□□□□ -1.92
E4F1Q66K89 SNORA71.1-201ENST00000364523 117 ntBASIC3.06□□□□□ -1.92
E4F1Q66K89 Y_RNA.368-201ENST00000365547 113 ntBASIC3.06□□□□□ -1.92
E4F1Q66K89 RNU6-975P-201ENST00000384296 105 ntBASIC3.06□□□□□ -1.92
E4F1Q66K89 Y_RNA.506-201ENST00000384494 102 ntBASIC3.06□□□□□ -1.92
E4F1Q66K89 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.06□□□□□ -1.92
E4F1Q66K89 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.06□□□□□ -1.92
E4F1Q66K89 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
E4F1Q66K89 RNU2-32P-201ENST00000411193 191 ntBASIC3.06□□□□□ -1.92
E4F1Q66K89 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
E4F1Q66K89 AC100767.1-201ENST00000528178 123 ntBASIC3.06□□□□□ -1.92
E4F1Q66K89 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.06□□□□□ -1.92
E4F1Q66K89 AC103988.1-201ENST00000566382 2177 ntBASIC3.06□□□□□ -1.92
E4F1Q66K89 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.06□□□□□ -1.92
E4F1Q66K89 MIR1248-201ENST00000629190 106 ntBASIC3.06□□□□□ -1.92
E4F1Q66K89 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
E4F1Q66K89 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.05□□□□□ -1.92
E4F1Q66K89 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.05□□□□□ -1.92
E4F1Q66K89 Y_RNA.238-201ENST00000364441 102 ntBASIC3.05□□□□□ -1.92
E4F1Q66K89 SNORA9.2-201ENST00000365361 133 ntBASIC3.05□□□□□ -1.92
E4F1Q66K89 RNU6-546P-201ENST00000383991 107 ntBASIC3.05□□□□□ -1.92
E4F1Q66K89 RNU6-418P-201ENST00000384035 107 ntBASIC3.05□□□□□ -1.92
E4F1Q66K89 SNORA20B-201ENST00000384220 132 ntBASIC3.05□□□□□ -1.92
E4F1Q66K89 Y_RNA.456-201ENST00000384232 111 ntBASIC3.05□□□□□ -1.92
E4F1Q66K89 RNU6-804P-201ENST00000384286 107 ntBASIC3.05□□□□□ -1.92
E4F1Q66K89 RNU6-125P-201ENST00000384505 107 ntBASIC3.05□□□□□ -1.92
E4F1Q66K89 AL355796.1-201ENST00000406706 323 ntBASIC3.05□□□□□ -1.92
E4F1Q66K89 AL121890.1-201ENST00000435457 205 ntBASIC3.05□□□□□ -1.92
E4F1Q66K89 HSPE1P21-201ENST00000438283 308 ntBASIC3.05□□□□□ -1.92
E4F1Q66K89 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.05□□□□□ -1.92
E4F1Q66K89 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.05□□□□□ -1.92
E4F1Q66K89 AC091826.1-201ENST00000514065 313 ntBASIC3.05□□□□□ -1.92
E4F1Q66K89 SUMO2P18-201ENST00000518873 252 ntBASIC3.05□□□□□ -1.92
E4F1Q66K89 AC018630.3-201ENST00000542637 96 ntBASIC3.05□□□□□ -1.92
E4F1Q66K89 AC004486.1-201ENST00000546846 233 ntBASIC3.05□□□□□ -1.92
E4F1Q66K89 MIR1254-2-201ENST00000579553 63 ntBASIC3.05□□□□□ -1.92
E4F1Q66K89 MIR3684-201ENST00000579779 74 ntBASIC3.05□□□□□ -1.92
E4F1Q66K89 AC004832.5-201ENST00000608677 401 ntBASIC3.05□□□□□ -1.92
E4F1Q66K89 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
E4F1Q66K89 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 235 ms