Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 RNU6-64P-201ENST00000517119 105 ntBASIC-1.48□□□□□ -2.65
CCDC18Q5T9S5 AC040926.1-201ENST00000530195 238 ntBASIC-1.48□□□□□ -2.65
CCDC18Q5T9S5 AC090517.1-201ENST00000569307 266 ntBASIC-1.48□□□□□ -2.65
CCDC18Q5T9S5 MIR4293-201ENST00000584305 78 ntBASIC-1.48□□□□□ -2.65
CCDC18Q5T9S5 AC131159.1-201ENST00000621854 213 ntBASIC-1.48□□□□□ -2.65
CCDC18Q5T9S5 Y_RNA.168-201ENST00000363740 102 ntBASIC-1.49□□□□□ -2.65
CCDC18Q5T9S5 RNU4-16P-201ENST00000364737 141 ntBASIC-1.49□□□□□ -2.65
CCDC18Q5T9S5 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.49□□□□□ -2.65
CCDC18Q5T9S5 RNU7-136P-201ENST00000458819 69 ntBASIC-1.49□□□□□ -2.65
CCDC18Q5T9S5 RNU7-94P-201ENST00000459576 63 ntBASIC-1.49□□□□□ -2.65
CCDC18Q5T9S5 AC090572.1-201ENST00000519251 160 ntBASIC-1.49□□□□□ -2.65
CCDC18Q5T9S5 MIR3115-201ENST00000577915 68 ntBASIC-1.49□□□□□ -2.65
CCDC18Q5T9S5 U6.42-201ENST00000618440 107 ntBASIC-1.49□□□□□ -2.65
CCDC18Q5T9S5 RNU6-187P-201ENST00000384139 106 ntBASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 RNU6-378P-201ENST00000384324 107 ntBASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 RNA5SP95-201ENST00000410319 137 ntBASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 MLLT10P1-201ENST00000418346 262 ntBASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 USP9YP11-201ENST00000427537 717 ntBASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 MTCO1P57-201ENST00000432182 261 ntBASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 HSFY7P-201ENST00000432672 318 ntBASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 HSFY8P-201ENST00000437934 318 ntBASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 RNU7-41P-201ENST00000515917 61 ntBASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 RMST_7.1-201ENST00000621935 268 ntBASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 AC092104.1-201ENST00000497346 1441 ntBASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 RNU6-527P-201ENST00000363425 104 ntBASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 RNA5SP117-201ENST00000365294 118 ntBASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 MIR526A1-201ENST00000384897 85 ntBASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 MIR520C-201ENST00000385005 87 ntBASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 SNORA26-201ENST00000391286 122 ntBASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 RNU6-274P-201ENST00000459566 107 ntBASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 RNU6-760P-201ENST00000516078 97 ntBASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 RNA5SP461-201ENST00000516451 104 ntBASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 RNA5SP470-201ENST00000516463 106 ntBASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 RNU6-897P-201ENST00000517135 105 ntBASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 MIR4666A-201ENST00000580160 79 ntBASIC-1.5□□□□□ -2.65
CCDC18Q5T9S5 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.51□□□□□ -2.65
CCDC18Q5T9S5 RNU6-975P-201ENST00000384296 105 ntBASIC-1.51□□□□□ -2.65
CCDC18Q5T9S5 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.51□□□□□ -2.65
CCDC18Q5T9S5 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-1.51□□□□□ -2.65
CCDC18Q5T9S5 AC016632.1-201ENST00000503994 196 ntBASIC-1.51□□□□□ -2.65
CCDC18Q5T9S5 AC112206.4-201ENST00000515142 405 ntBASIC-1.51□□□□□ -2.65
CCDC18Q5T9S5 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.52□□□□□ -2.65
CCDC18Q5T9S5 SNORA72.1-201ENST00000363485 129 ntBASIC-1.52□□□□□ -2.65
CCDC18Q5T9S5 Y_RNA.336-201ENST00000365307 109 ntBASIC-1.52□□□□□ -2.65
CCDC18Q5T9S5 SNORA26.3-201ENST00000391119 136 ntBASIC-1.52□□□□□ -2.65
CCDC18Q5T9S5 RNU6-613P-201ENST00000410412 108 ntBASIC-1.52□□□□□ -2.65
CCDC18Q5T9S5 AC244670.1-201ENST00000436879 112 ntBASIC-1.52□□□□□ -2.65
CCDC18Q5T9S5 AC093899.1-201ENST00000457984 376 ntBASIC-1.52□□□□□ -2.65
CCDC18Q5T9S5 AC010424.1-201ENST00000506336 297 ntBASIC-1.52□□□□□ -2.65
CCDC18Q5T9S5 DEFB130C-202ENST00000530001 230 ntBASIC-1.52□□□□□ -2.65
CCDC18Q5T9S5 AC090897.1-201ENST00000580909 226 ntBASIC-1.52□□□□□ -2.65
CCDC18Q5T9S5 AC008752.3-201ENST00000588113 712 ntBASIC-1.52□□□□□ -2.65
CCDC18Q5T9S5 AC120349.2-201ENST00000625002 298 ntBASIC-1.52□□□□□ -2.65
CCDC18Q5T9S5 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.53□□□□□ -2.65
CCDC18Q5T9S5 MIR563-201ENST00000385080 79 ntBASIC-1.53□□□□□ -2.65
CCDC18Q5T9S5 RNU6-796P-201ENST00000391086 107 ntBASIC-1.53□□□□□ -2.65
CCDC18Q5T9S5 MTND3P17-201ENST00000416968 344 ntBASIC-1.53□□□□□ -2.65
CCDC18Q5T9S5 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-1.53□□□□□ -2.65
CCDC18Q5T9S5 TPTE2P1-204ENST00000435256 593 ntBASIC-1.53□□□□□ -2.65
CCDC18Q5T9S5 RNU7-140P-201ENST00000459546 60 ntBASIC-1.53□□□□□ -2.65
CCDC18Q5T9S5 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-1.53□□□□□ -2.65
CCDC18Q5T9S5 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-1.53□□□□□ -2.65
CCDC18Q5T9S5 Z99497.2-201ENST00000603634 310 ntBASIC-1.53□□□□□ -2.65
CCDC18Q5T9S5 AC121334.2-201ENST00000605387 271 ntBASIC-1.53□□□□□ -2.65
CCDC18Q5T9S5 AL590491.3-201ENST00000610731 82 ntBASIC-1.53□□□□□ -2.65
CCDC18Q5T9S5 AC112204.3-201ENST00000623822 332 ntBASIC-1.53□□□□□ -2.65
CCDC18Q5T9S5 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-1.54□□□□□ -2.66
CCDC18Q5T9S5 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-1.54□□□□□ -2.66
CCDC18Q5T9S5 MIR15A-201ENST00000607334 83 ntBASIC-1.54□□□□□ -2.66
CCDC18Q5T9S5 CDR1-202ENST00000625883 1485 ntBASIC-1.54□□□□□ -2.66
CCDC18Q5T9S5 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-1.54□□□□□ -2.66
CCDC18Q5T9S5 SNORD56.4-201ENST00000363883 71 ntBASIC-1.55□□□□□ -2.66
CCDC18Q5T9S5 Y_RNA.265-201ENST00000364677 108 ntBASIC-1.55□□□□□ -2.66
CCDC18Q5T9S5 MIR549A-201ENST00000385268 96 ntBASIC-1.55□□□□□ -2.66
CCDC18Q5T9S5 RNU6-278P-201ENST00000390945 109 ntBASIC-1.55□□□□□ -2.66
CCDC18Q5T9S5 RNU4-22P-201ENST00000411058 166 ntBASIC-1.55□□□□□ -2.66
CCDC18Q5T9S5 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.55□□□□□ -2.66
CCDC18Q5T9S5 MTCO2P23-201ENST00000425216 680 ntBASIC-1.55□□□□□ -2.66
CCDC18Q5T9S5 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-1.55□□□□□ -2.66
CCDC18Q5T9S5 AC104563.1-201ENST00000476147 376 ntBASIC-1.55□□□□□ -2.66
CCDC18Q5T9S5 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-1.55□□□□□ -2.66
CCDC18Q5T9S5 MTCO3P27-201ENST00000514397 196 ntBASIC-1.55□□□□□ -2.66
CCDC18Q5T9S5 RNU6-63P-201ENST00000516690 95 ntBASIC-1.55□□□□□ -2.66
CCDC18Q5T9S5 AP003168.1-201ENST00000530091 307 ntBASIC-1.55□□□□□ -2.66
CCDC18Q5T9S5 AC133485.4-201ENST00000561835 220 ntBASIC-1.55□□□□□ -2.66
CCDC18Q5T9S5 AL022154.1-201ENST00000604698 785 ntBASIC-1.55□□□□□ -2.66
CCDC18Q5T9S5 AC124016.2-201ENST00000610058 665 ntBASIC-1.55□□□□□ -2.66
CCDC18Q5T9S5 AC106754.1-201ENST00000562632 1513 ntBASIC-1.55□□□□□ -2.66
CCDC18Q5T9S5 RNU6-562P-201ENST00000362731 107 ntBASIC-1.56□□□□□ -2.66
CCDC18Q5T9S5 MTND1P31-201ENST00000449206 961 ntBASIC-1.56□□□□□ -2.66
CCDC18Q5T9S5 AP002004.2-201ENST00000531656 154 ntBASIC-1.56□□□□□ -2.66
CCDC18Q5T9S5 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-1.56□□□□□ -2.66
CCDC18Q5T9S5 MIR19A-201ENST00000384878 82 ntBASIC-1.56□□□□□ -2.66
CCDC18Q5T9S5 RNU6-1186P-201ENST00000410429 97 ntBASIC-1.56□□□□□ -2.66
CCDC18Q5T9S5 RPS24P1-201ENST00000438550 371 ntBASIC-1.56□□□□□ -2.66
CCDC18Q5T9S5 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-1.56□□□□□ -2.66
CCDC18Q5T9S5 VN1R87P-201ENST00000596706 487 ntBASIC-1.56□□□□□ -2.66
CCDC18Q5T9S5 AC005332.6-201ENST00000613178 446 ntBASIC-1.56□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms