Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 RNA5SP222-201ENST00000411039 105 ntBASIC0.19□□□□□ -2.38
SNAPC4Q5SXM2 AL365184.2-201ENST00000431139 435 ntBASIC0.19□□□□□ -2.38
SNAPC4Q5SXM2 AL512286.1-201ENST00000439244 400 ntBASIC0.19□□□□□ -2.38
SNAPC4Q5SXM2 RNU7-182P-201ENST00000459009 62 ntBASIC0.19□□□□□ -2.38
SNAPC4Q5SXM2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.19□□□□□ -2.38
SNAPC4Q5SXM2 RNU7-12P-201ENST00000516030 62 ntBASIC0.19□□□□□ -2.38
SNAPC4Q5SXM2 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.19□□□□□ -2.38
SNAPC4Q5SXM2 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
SNAPC4Q5SXM2 MIR4775-201ENST00000581168 75 ntBASIC0.19□□□□□ -2.38
SNAPC4Q5SXM2 AC234772.3-201ENST00000602277 528 ntBASIC0.19□□□□□ -2.38
SNAPC4Q5SXM2 AC025449.1-201ENST00000603896 529 ntBASIC0.19□□□□□ -2.38
SNAPC4Q5SXM2 AC009159.2-201ENST00000617603 606 ntBASIC0.19□□□□□ -2.38
SNAPC4Q5SXM2 U6.73-201ENST00000619194 103 ntBASIC0.19□□□□□ -2.38
SNAPC4Q5SXM2 SEPT14P19-203ENST00000633205 211 ntBASIC0.19□□□□□ -2.38
SNAPC4Q5SXM2 SNORA36.2-201ENST00000384004 127 ntBASIC0.18□□□□□ -2.38
SNAPC4Q5SXM2 RNA5SP494-201ENST00000410653 129 ntBASIC0.18□□□□□ -2.38
SNAPC4Q5SXM2 AC093019.1-201ENST00000443135 252 ntBASIC0.18□□□□□ -2.38
SNAPC4Q5SXM2 EPS15P1-201ENST00000448836 336 ntBASIC0.18□□□□□ -2.38
SNAPC4Q5SXM2 AC007215.1-201ENST00000464893 276 ntBASIC0.18□□□□□ -2.38
SNAPC4Q5SXM2 RPL23AP54-201ENST00000495129 419 ntBASIC0.18□□□□□ -2.38
SNAPC4Q5SXM2 AC090572.1-201ENST00000519251 160 ntBASIC0.18□□□□□ -2.38
SNAPC4Q5SXM2 AC109810.1-201ENST00000534066 224 ntBASIC0.18□□□□□ -2.38
SNAPC4Q5SXM2 MIR4509-3-201ENST00000578671 94 ntBASIC0.18□□□□□ -2.38
SNAPC4Q5SXM2 MIR4667-201ENST00000578933 66 ntBASIC0.18□□□□□ -2.38
SNAPC4Q5SXM2 MIR4509-2-201ENST00000583920 94 ntBASIC0.18□□□□□ -2.38
SNAPC4Q5SXM2 AC004832.4-201ENST00000608952 331 ntBASIC0.18□□□□□ -2.38
SNAPC4Q5SXM2 MIR4509-1-201ENST00000618224 94 ntBASIC0.18□□□□□ -2.38
SNAPC4Q5SXM2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
SNAPC4Q5SXM2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.17□□□□□ -2.38
SNAPC4Q5SXM2 AC244098.3-201ENST00000424803 96 ntBASIC0.17□□□□□ -2.38
SNAPC4Q5SXM2 AC104332.1-201ENST00000440471 797 ntBASIC0.17□□□□□ -2.38
SNAPC4Q5SXM2 MTCO2P3-201ENST00000442543 421 ntBASIC0.17□□□□□ -2.38
SNAPC4Q5SXM2 MTCO1P19-201ENST00000443487 500 ntBASIC0.17□□□□□ -2.38
SNAPC4Q5SXM2 AC079781.2-201ENST00000446424 169 ntBASIC0.17□□□□□ -2.38
SNAPC4Q5SXM2 MTCO2P6-201ENST00000463134 685 ntBASIC0.17□□□□□ -2.38
SNAPC4Q5SXM2 RNU6-1220P-201ENST00000517126 108 ntBASIC0.17□□□□□ -2.38
SNAPC4Q5SXM2 AL157392.4-201ENST00000609756 345 ntBASIC0.17□□□□□ -2.38
SNAPC4Q5SXM2 AL391903.3-201ENST00000612158 163 ntBASIC0.17□□□□□ -2.38
SNAPC4Q5SXM2 AC006927.3-201ENST00000638789 384 ntBASIC0.17□□□□□ -2.38
SNAPC4Q5SXM2 Y_RNA.265-201ENST00000364677 108 ntBASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 RNU6-1327P-201ENST00000365302 105 ntBASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 AC016909.1-201ENST00000415916 166 ntBASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 Vault.3-201ENST00000516676 95 ntBASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 AC131055.1-201ENST00000584626 316 ntBASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 AP000811.1-201ENST00000603803 651 ntBASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 AC002044.1-201ENST00000606707 158 ntBASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 MTND4P4-201ENST00000439033 1366 ntBASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 RNA5SP264-201ENST00000363115 107 ntBASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 SNORA67.2-201ENST00000384300 149 ntBASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 SNORA12.1-201ENST00000390873 148 ntBASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 U8.16-201ENST00000391279 133 ntBASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 RNU4-46P-201ENST00000410818 138 ntBASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 AC093850.1-201ENST00000454121 251 ntBASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 AC023827.1-201ENST00000569247 97 ntBASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 AC017083.3-201ENST00000609955 700 ntBASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 SEPT14P17-201ENST00000617978 177 ntBASIC0.16□□□□□ -2.38
SNAPC4Q5SXM2 MTND5P16-201ENST00000460269 1703 ntBASIC0.15□□□□□ -2.38
SNAPC4Q5SXM2 MTND4P9-201ENST00000507819 1346 ntBASIC0.15□□□□□ -2.39
SNAPC4Q5SXM2 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
SNAPC4Q5SXM2 MIR454-201ENST00000390180 115 ntBASIC0.15□□□□□ -2.39
SNAPC4Q5SXM2 RPS26P42-201ENST00000413485 326 ntBASIC0.15□□□□□ -2.39
SNAPC4Q5SXM2 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.15□□□□□ -2.39
SNAPC4Q5SXM2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.15□□□□□ -2.39
SNAPC4Q5SXM2 RNU6-1037P-201ENST00000459571 107 ntBASIC0.15□□□□□ -2.39
SNAPC4Q5SXM2 RNU2-69P-201ENST00000516061 100 ntBASIC0.15□□□□□ -2.39
SNAPC4Q5SXM2 RNU7-28P-201ENST00000516759 62 ntBASIC0.15□□□□□ -2.39
SNAPC4Q5SXM2 RNU6-410P-201ENST00000517006 107 ntBASIC0.15□□□□□ -2.39
SNAPC4Q5SXM2 AC022868.1-201ENST00000517767 391 ntBASIC0.15□□□□□ -2.39
SNAPC4Q5SXM2 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.15□□□□□ -2.39
SNAPC4Q5SXM2 AC004223.2-201ENST00000590309 544 ntBASIC0.15□□□□□ -2.39
SNAPC4Q5SXM2 AL096861.1-201ENST00000610899 123 ntBASIC0.15□□□□□ -2.39
SNAPC4Q5SXM2 RNY3-201ENST00000365484 102 ntBASIC0.14□□□□□ -2.39
SNAPC4Q5SXM2 RNU6-1029P-201ENST00000384109 107 ntBASIC0.14□□□□□ -2.39
SNAPC4Q5SXM2 Y_RNA.453-201ENST00000384223 109 ntBASIC0.14□□□□□ -2.39
SNAPC4Q5SXM2 RNU6-424P-201ENST00000384367 105 ntBASIC0.14□□□□□ -2.39
SNAPC4Q5SXM2 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.14□□□□□ -2.39
SNAPC4Q5SXM2 USP9YP12-201ENST00000450481 570 ntBASIC0.14□□□□□ -2.39
SNAPC4Q5SXM2 SCARNA18-201ENST00000459004 134 ntBASIC0.14□□□□□ -2.39
SNAPC4Q5SXM2 RNU6-85P-201ENST00000605989 107 ntBASIC0.14□□□□□ -2.39
SNAPC4Q5SXM2 RNU4-5P-201ENST00000607255 135 ntBASIC0.14□□□□□ -2.39
SNAPC4Q5SXM2 MIR103A2-201ENST00000362154 78 ntBASIC0.13□□□□□ -2.39
SNAPC4Q5SXM2 RNU5F-6P-201ENST00000362979 116 ntBASIC0.13□□□□□ -2.39
SNAPC4Q5SXM2 RNU5E-5P-201ENST00000365379 116 ntBASIC0.13□□□□□ -2.39
SNAPC4Q5SXM2 AC004866.1-201ENST00000411748 78 ntBASIC0.13□□□□□ -2.39
SNAPC4Q5SXM2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.13□□□□□ -2.39
SNAPC4Q5SXM2 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.13□□□□□ -2.39
SNAPC4Q5SXM2 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.13□□□□□ -2.39
SNAPC4Q5SXM2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.13□□□□□ -2.39
SNAPC4Q5SXM2 TPT1P7-201ENST00000458300 517 ntBASIC0.13□□□□□ -2.39
SNAPC4Q5SXM2 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.13□□□□□ -2.39
SNAPC4Q5SXM2 RNU6-344P-201ENST00000516635 111 ntBASIC0.13□□□□□ -2.39
SNAPC4Q5SXM2 AC093027.1-201ENST00000546698 429 ntBASIC0.13□□□□□ -2.39
SNAPC4Q5SXM2 AC007014.2-201ENST00000615581 479 ntBASIC0.13□□□□□ -2.39
SNAPC4Q5SXM2 RNU6-227P-201ENST00000362865 103 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms