Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VARS2Q5ST30 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
VARS2Q5ST30 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
VARS2Q5ST30 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.49□□□□□ -1.69
VARS2Q5ST30 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
VARS2Q5ST30 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
VARS2Q5ST30 RNU4-32P-201ENST00000363404 141 ntBASIC4.49□□□□□ -1.69
VARS2Q5ST30 RNU6-1163P-201ENST00000364516 107 ntBASIC4.49□□□□□ -1.69
VARS2Q5ST30 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
VARS2Q5ST30 GOT2P5-201ENST00000433995 546 ntBASIC4.49□□□□□ -1.69
VARS2Q5ST30 AL162151.2-201ENST00000448875 158 ntBASIC4.49□□□□□ -1.69
VARS2Q5ST30 RPS29P19-201ENST00000479709 171 ntBASIC4.49□□□□□ -1.69
VARS2Q5ST30 Y_RNA.714-201ENST00000517065 90 ntBASIC4.49□□□□□ -1.69
VARS2Q5ST30 AP003484.1-201ENST00000530974 250 ntBASIC4.49□□□□□ -1.69
VARS2Q5ST30 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.49□□□□□ -1.69
VARS2Q5ST30 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VARS2Q5ST30 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
VARS2Q5ST30 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.49□□□□□ -1.69
VARS2Q5ST30 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VARS2Q5ST30 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.49□□□□□ -1.69
VARS2Q5ST30 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VARS2Q5ST30 AC005336.3-201ENST00000623833 2679 ntBASIC4.49□□□□□ -1.69
VARS2Q5ST30 AC018630.2-201ENST00000534866 2403 ntBASIC4.48□□□□□ -1.69
VARS2Q5ST30 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
VARS2Q5ST30 AC027290.2-201ENST00000623210 18662 ntBASIC4.48□□□□□ -1.69
VARS2Q5ST30 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VARS2Q5ST30 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
VARS2Q5ST30 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.48□□□□□ -1.69
VARS2Q5ST30 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
VARS2Q5ST30 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VARS2Q5ST30 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
VARS2Q5ST30 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VARS2Q5ST30 AP003122.5-201ENST00000527668 3766 ntBASIC4.48□□□□□ -1.69
VARS2Q5ST30 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
VARS2Q5ST30 SNORD31B-201ENST00000364977 69 ntBASIC4.48□□□□□ -1.69
VARS2Q5ST30 MIR7-3-201ENST00000384898 110 ntBASIC4.48□□□□□ -1.69
VARS2Q5ST30 RNA5SP246-201ENST00000458909 119 ntBASIC4.48□□□□□ -1.69
VARS2Q5ST30 MIR449C-201ENST00000516047 92 ntBASIC4.48□□□□□ -1.69
VARS2Q5ST30 RNU6-1015P-201ENST00000517121 99 ntBASIC4.48□□□□□ -1.69
VARS2Q5ST30 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC4.48□□□□□ -1.69
VARS2Q5ST30 HMGN2P15-201ENST00000585707 270 ntBASIC4.48□□□□□ -1.69
VARS2Q5ST30 CR392039.5-201ENST00000623201 510 ntBASIC4.48□□□□□ -1.69
VARS2Q5ST30 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.48□□□□□ -1.69
VARS2Q5ST30 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
VARS2Q5ST30 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VARS2Q5ST30 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
VARS2Q5ST30 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.48□□□□□ -1.69
VARS2Q5ST30 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.69
VARS2Q5ST30 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
VARS2Q5ST30 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VARS2Q5ST30 MIR126-201ENST00000362291 85 ntBASIC4.47□□□□□ -1.69
VARS2Q5ST30 Y_RNA.247-201ENST00000364500 92 ntBASIC4.47□□□□□ -1.69
VARS2Q5ST30 RNA5SP22-201ENST00000365393 109 ntBASIC4.47□□□□□ -1.69
VARS2Q5ST30 MIR802-201ENST00000390235 94 ntBASIC4.47□□□□□ -1.69
VARS2Q5ST30 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.47□□□□□ -1.69
VARS2Q5ST30 RNU2-59P-201ENST00000410482 191 ntBASIC4.47□□□□□ -1.69
VARS2Q5ST30 HSPE1P12-201ENST00000412576 301 ntBASIC4.47□□□□□ -1.69
VARS2Q5ST30 SNRPGP5-201ENST00000456003 220 ntBASIC4.47□□□□□ -1.69
VARS2Q5ST30 SCARNA18B-201ENST00000458806 135 ntBASIC4.47□□□□□ -1.69
VARS2Q5ST30 RNU6-917P-201ENST00000516294 104 ntBASIC4.47□□□□□ -1.69
VARS2Q5ST30 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
VARS2Q5ST30 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
VARS2Q5ST30 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.47□□□□□ -1.69
VARS2Q5ST30 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VARS2Q5ST30 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.47□□□□□ -1.69
VARS2Q5ST30 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
VARS2Q5ST30 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.46□□□□□ -1.69
VARS2Q5ST30 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
VARS2Q5ST30 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VARS2Q5ST30 Y_RNA.140-201ENST00000363474 103 ntBASIC4.46□□□□□ -1.7
VARS2Q5ST30 SNORD77B-201ENST00000391112 67 ntBASIC4.46□□□□□ -1.7
VARS2Q5ST30 RPL23AP48-201ENST00000406913 488 ntBASIC4.46□□□□□ -1.7
VARS2Q5ST30 POLR2J4-204ENST00000418424 324 ntBASIC4.46□□□□□ -1.7
VARS2Q5ST30 FTH1P12-201ENST00000432137 551 ntBASIC4.46□□□□□ -1.7
VARS2Q5ST30 RPS29P7-201ENST00000439662 171 ntBASIC4.46□□□□□ -1.7
VARS2Q5ST30 AC233266.1-201ENST00000454518 96 ntBASIC4.46□□□□□ -1.7
VARS2Q5ST30 VWA8P1-201ENST00000510889 176 ntBASIC4.46□□□□□ -1.7
VARS2Q5ST30 AC242852.1-201ENST00000612151 96 ntBASIC4.46□□□□□ -1.7
VARS2Q5ST30 AC244015.1-201ENST00000622301 99 ntBASIC4.46□□□□□ -1.7
VARS2Q5ST30 Clostridiales-1.3-201ENST00000637703 147 ntBASIC4.46□□□□□ -1.7
VARS2Q5ST30 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.46□□□□□ -1.7
VARS2Q5ST30 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VARS2Q5ST30 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.46□□□□□ -1.7
VARS2Q5ST30 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VARS2Q5ST30 AC092435.4-201ENST00000623012 4159 ntBASIC4.45□□□□□ -1.7
VARS2Q5ST30 RNA5SP502-201ENST00000362694 119 ntBASIC4.45□□□□□ -1.7
VARS2Q5ST30 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
VARS2Q5ST30 AL627390.1-201ENST00000396055 340 ntBASIC4.45□□□□□ -1.7
VARS2Q5ST30 MIR1179-201ENST00000408703 91 ntBASIC4.45□□□□□ -1.7
VARS2Q5ST30 AC023141.4-201ENST00000412031 328 ntBASIC4.45□□□□□ -1.7
VARS2Q5ST30 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.45□□□□□ -1.7
VARS2Q5ST30 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.45□□□□□ -1.7
VARS2Q5ST30 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC4.45□□□□□ -1.7
VARS2Q5ST30 AL133547.1-201ENST00000448546 220 ntBASIC4.45□□□□□ -1.7
VARS2Q5ST30 ABCF2P2-201ENST00000450549 296 ntBASIC4.45□□□□□ -1.7
VARS2Q5ST30 RNU6-1073P-201ENST00000517182 106 ntBASIC4.45□□□□□ -1.7
VARS2Q5ST30 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC4.45□□□□□ -1.7
VARS2Q5ST30 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.45□□□□□ -1.7
VARS2Q5ST30 MIR4298-201ENST00000584380 73 ntBASIC4.45□□□□□ -1.7
VARS2Q5ST30 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms