Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 MIR4529-201ENST00000578110 78 ntBASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 MZT1P2-201ENST00000604387 248 ntBASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 SNRPGP20-201ENST00000604477 205 ntBASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 AL357075.2-201ENST00000614906 189 ntBASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 MIR6132-201ENST00000622083 109 ntBASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.87□□□□□ -2.11
SNAI3Q3KNW1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 SNORD115-3-201ENST00000363100 82 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 Y_RNA.179-201ENST00000363844 90 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 SNORD32B-201ENST00000364460 84 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 SNORD63-201ENST00000384262 68 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 Y_RNA.461-201ENST00000384263 103 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 Y_RNA.518-201ENST00000384552 113 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 MIR29B2-201ENST00000385055 81 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 MT-TG-201ENST00000387429 68 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 MIR1302-6-201ENST00000408466 90 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 MIR320B2-201ENST00000408479 138 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 Y_RNA.595-201ENST00000410403 105 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 RNU2-32P-201ENST00000411193 191 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 AC004866.1-201ENST00000411748 78 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 AC091179.3-201ENST00000474761 144 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 RPS27P21-201ENST00000486977 252 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 Y_RNA.683-201ENST00000516508 93 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 SCARNA16.3-201ENST00000516595 184 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 CYCSP23-201ENST00000519781 313 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 DEFB131C-201ENST00000528817 165 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 AC026470.2-201ENST00000561492 181 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 AC026271.5-201ENST00000577873 130 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 MIR4300-201ENST00000581016 96 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 MIR5002-201ENST00000584713 97 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 MTND5P35-201ENST00000557537 1720 ntBASIC1.86□□□□□ -2.11
SNAI3Q3KNW1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 MIR449A-201ENST00000362113 91 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 RNA5SP276-201ENST00000362580 94 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 snoU2_19.2-201ENST00000363024 80 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 RNU6-793P-201ENST00000384233 104 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 Y_RNA.462-201ENST00000384268 102 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 RNU6-937P-201ENST00000384325 106 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 Y_RNA.483-201ENST00000384380 101 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 MIR215-201ENST00000384858 110 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 MIR17-201ENST00000385012 84 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 SNORA48.3-201ENST00000391081 134 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 SNORA12-201ENST00000391162 147 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 RNU2-20P-201ENST00000410425 191 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 AC027124.2-201ENST00000428249 105 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 AC004386.2-201ENST00000441858 148 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 SNORA40.9-201ENST00000515895 93 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 MIR514B-201ENST00000516774 80 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 NDUFA5P6-201ENST00000542110 379 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 MIR4423-201ENST00000580922 80 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 AC062037.2-201ENST00000610137 73 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 MIR376A1-201ENST00000616574 68 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 AC005562.2-201ENST00000618264 111 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 AP006437.1-201ENST00000641440 3685 ntBASIC1.85□□□□□ -2.11
SNAI3Q3KNW1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 Y_RNA.84-201ENST00000363011 104 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 RNU6-626P-201ENST00000363354 107 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 RNU6-961P-201ENST00000363893 105 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 RNU6-944P-201ENST00000364023 107 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 RNU6-546P-201ENST00000383991 107 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 Y_RNA.618-201ENST00000410949 107 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 AC005002.2-201ENST00000438228 269 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 AL137159.1-201ENST00000452808 512 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 SNORD127-201ENST00000458892 86 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 AC074133.1-201ENST00000515696 183 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 RNU6-344P-201ENST00000516635 111 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 RNU6-965P-201ENST00000516721 96 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 RNU2-44P-201ENST00000516795 194 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 HSPE1P18-201ENST00000517602 280 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 AC023157.2-201ENST00000540596 141 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 RRN3P3-201ENST00000549207 578 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 AC110588.1-201ENST00000559699 137 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 MIR4287-201ENST00000579398 78 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 MIR4448-201ENST00000584360 86 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 AC002984.1-201ENST00000591692 448 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 RPL17P51-201ENST00000605218 238 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 TCL6_2.1-201ENST00000615162 119 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 MIR6873-201ENST00000622788 63 ntBASIC1.84□□□□□ -2.11
SNAI3Q3KNW1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms