Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.52□□□□□ -2.17
SCN1BQ07699 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.52□□□□□ -2.17
SCN1BQ07699 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.52□□□□□ -2.17
SCN1BQ07699 RNY1P16-201ENST00000363063 111 ntBASIC1.51□□□□□ -2.17
SCN1BQ07699 RNA5SP213-201ENST00000391031 106 ntBASIC1.51□□□□□ -2.17
SCN1BQ07699 AC004965.1-201ENST00000413033 213 ntBASIC1.51□□□□□ -2.17
SCN1BQ07699 AL135790.2-201ENST00000437701 267 ntBASIC1.51□□□□□ -2.17
SCN1BQ07699 AC027119.1-201ENST00000440877 241 ntBASIC1.51□□□□□ -2.17
SCN1BQ07699 RNU7-128P-201ENST00000517247 62 ntBASIC1.51□□□□□ -2.17
SCN1BQ07699 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.51□□□□□ -2.17
SCN1BQ07699 AL442163.3-201ENST00000554110 156 ntBASIC1.51□□□□□ -2.17
SCN1BQ07699 AL121579.1-201ENST00000555129 305 ntBASIC1.51□□□□□ -2.17
SCN1BQ07699 AC110588.1-201ENST00000559699 137 ntBASIC1.51□□□□□ -2.17
SCN1BQ07699 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.51□□□□□ -2.17
SCN1BQ07699 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.51□□□□□ -2.17
SCN1BQ07699 U6.73-201ENST00000619194 103 ntBASIC1.51□□□□□ -2.17
SCN1BQ07699 Y_RNA.339-201ENST00000365325 102 ntBASIC1.5□□□□□ -2.17
SCN1BQ07699 MIR513A1-201ENST00000385138 129 ntBASIC1.5□□□□□ -2.17
SCN1BQ07699 TOMM22P2-201ENST00000430735 237 ntBASIC1.5□□□□□ -2.17
SCN1BQ07699 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.5□□□□□ -2.17
SCN1BQ07699 MTND3P10-201ENST00000450967 341 ntBASIC1.5□□□□□ -2.17
SCN1BQ07699 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.5□□□□□ -2.17
SCN1BQ07699 AC099513.1-201ENST00000490423 301 ntBASIC1.5□□□□□ -2.17
SCN1BQ07699 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.5□□□□□ -2.17
SCN1BQ07699 SNORA31.10-201ENST00000516482 106 ntBASIC1.5□□□□□ -2.17
SCN1BQ07699 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.5□□□□□ -2.17
SCN1BQ07699 AC005668.1-201ENST00000571142 476 ntBASIC1.5□□□□□ -2.17
SCN1BQ07699 AC090617.3-201ENST00000573670 475 ntBASIC1.5□□□□□ -2.17
SCN1BQ07699 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.5□□□□□ -2.17
SCN1BQ07699 AC080078.2-201ENST00000603766 501 ntBASIC1.5□□□□□ -2.17
SCN1BQ07699 AL121890.5-201ENST00000620848 304 ntBASIC1.5□□□□□ -2.17
SCN1BQ07699 AC098679.4-201ENST00000624241 654 ntBASIC1.5□□□□□ -2.17
SCN1BQ07699 RNU6-874P-201ENST00000362390 105 ntBASIC1.49□□□□□ -2.17
SCN1BQ07699 Y_RNA.88-201ENST00000363029 99 ntBASIC1.49□□□□□ -2.17
SCN1BQ07699 Y_RNA.364-201ENST00000365532 101 ntBASIC1.49□□□□□ -2.17
SCN1BQ07699 SNORA70B-201ENST00000384210 135 ntBASIC1.49□□□□□ -2.17
SCN1BQ07699 RNU6-950P-201ENST00000384651 107 ntBASIC1.49□□□□□ -2.17
SCN1BQ07699 MIR583-201ENST00000384846 75 ntBASIC1.49□□□□□ -2.17
SCN1BQ07699 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SCN1BQ07699 EIF1P2-201ENST00000428233 350 ntBASIC1.49□□□□□ -2.17
SCN1BQ07699 AC245047.3-201ENST00000429428 127 ntBASIC1.49□□□□□ -2.17
SCN1BQ07699 UQCRBP2-201ENST00000447827 297 ntBASIC1.49□□□□□ -2.17
SCN1BQ07699 FGF7P6-202ENST00000451282 293 ntBASIC1.49□□□□□ -2.17
SCN1BQ07699 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.49□□□□□ -2.17
SCN1BQ07699 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.49□□□□□ -2.17
SCN1BQ07699 RNU7-30P-201ENST00000516835 62 ntBASIC1.49□□□□□ -2.17
SCN1BQ07699 AC105029.1-201ENST00000520250 669 ntBASIC1.49□□□□□ -2.17
SCN1BQ07699 AC023157.2-201ENST00000540596 141 ntBASIC1.49□□□□□ -2.17
SCN1BQ07699 MIR4438-201ENST00000585271 93 ntBASIC1.49□□□□□ -2.17
SCN1BQ07699 AC021506.2-201ENST00000612354 169 ntBASIC1.49□□□□□ -2.17
SCN1BQ07699 AC040896.1-201ENST00000613819 479 ntBASIC1.49□□□□□ -2.17
SCN1BQ07699 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.49□□□□□ -2.17
SCN1BQ07699 RNA5SP361-201ENST00000362686 118 ntBASIC1.48□□□□□ -2.17
SCN1BQ07699 SNORD33-201ENST00000362761 85 ntBASIC1.48□□□□□ -2.17
SCN1BQ07699 Y_RNA.482-201ENST00000384377 111 ntBASIC1.48□□□□□ -2.17
SCN1BQ07699 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.48□□□□□ -2.17
SCN1BQ07699 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN1BQ07699 MTCYBP10-201ENST00000424905 650 ntBASIC1.48□□□□□ -2.17
SCN1BQ07699 SNORD65B-201ENST00000459126 73 ntBASIC1.48□□□□□ -2.17
SCN1BQ07699 RPS27P22-201ENST00000478056 241 ntBASIC1.48□□□□□ -2.17
SCN1BQ07699 AC046134.1-201ENST00000514454 666 ntBASIC1.48□□□□□ -2.17
SCN1BQ07699 RNU7-99P-201ENST00000516271 62 ntBASIC1.48□□□□□ -2.17
SCN1BQ07699 MTND4LP26-201ENST00000518144 282 ntBASIC1.48□□□□□ -2.17
SCN1BQ07699 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN1BQ07699 AL365434.2-201ENST00000607979 234 ntBASIC1.48□□□□□ -2.17
SCN1BQ07699 U6atac.1-201ENST00000616025 117 ntBASIC1.48□□□□□ -2.17
SCN1BQ07699 PISRT1.1-201ENST00000616930 107 ntBASIC1.48□□□□□ -2.17
SCN1BQ07699 MIR8054-201ENST00000620877 86 ntBASIC1.48□□□□□ -2.17
SCN1BQ07699 CASC19-280ENST00000642102 1351 ntBASIC1.47□□□□□ -2.17
SCN1BQ07699 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
SCN1BQ07699 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SCN1BQ07699 RNU6-879P-201ENST00000364328 108 ntBASIC1.47□□□□□ -2.17
SCN1BQ07699 RNA5SP259-201ENST00000365541 109 ntBASIC1.47□□□□□ -2.17
SCN1BQ07699 Y_RNA.404-201ENST00000383978 102 ntBASIC1.47□□□□□ -2.17
SCN1BQ07699 RNU6-767P-201ENST00000384132 107 ntBASIC1.47□□□□□ -2.17
SCN1BQ07699 RNU6-1065P-201ENST00000384513 106 ntBASIC1.47□□□□□ -2.17
SCN1BQ07699 RNU6-1031P-201ENST00000384773 107 ntBASIC1.47□□□□□ -2.17
SCN1BQ07699 MIR329-1-201ENST00000385028 80 ntBASIC1.47□□□□□ -2.17
SCN1BQ07699 Y_RNA.595-201ENST00000410403 105 ntBASIC1.47□□□□□ -2.17
SCN1BQ07699 AC092423.1-201ENST00000430165 186 ntBASIC1.47□□□□□ -2.17
SCN1BQ07699 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.47□□□□□ -2.17
SCN1BQ07699 MRPS10P1-201ENST00000448483 130 ntBASIC1.47□□□□□ -2.17
SCN1BQ07699 U8.22-201ENST00000459141 133 ntBASIC1.47□□□□□ -2.17
SCN1BQ07699 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.47□□□□□ -2.17
SCN1BQ07699 RPS29P11-201ENST00000496507 171 ntBASIC1.47□□□□□ -2.17
SCN1BQ07699 MIR8081-201ENST00000611533 95 ntBASIC1.47□□□□□ -2.17
SCN1BQ07699 AL357075.2-201ENST00000614906 189 ntBASIC1.47□□□□□ -2.17
SCN1BQ07699 AL078604.3-201ENST00000615580 211 ntBASIC1.47□□□□□ -2.17
SCN1BQ07699 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.47□□□□□ -2.17
SCN1BQ07699 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.47□□□□□ -2.17
SCN1BQ07699 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.47□□□□□ -2.17
SCN1BQ07699 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
SCN1BQ07699 Y_RNA.160-201ENST00000363677 92 ntBASIC1.46□□□□□ -2.18
SCN1BQ07699 Y_RNA.557-201ENST00000384680 107 ntBASIC1.46□□□□□ -2.18
SCN1BQ07699 RNU6-955P-201ENST00000410497 104 ntBASIC1.46□□□□□ -2.18
SCN1BQ07699 RN7SKP200-201ENST00000410564 320 ntBASIC1.46□□□□□ -2.18
SCN1BQ07699 Y_RNA.619-201ENST00000410951 90 ntBASIC1.46□□□□□ -2.18
SCN1BQ07699 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.46□□□□□ -2.18
SCN1BQ07699 RPL23AP50-201ENST00000434149 455 ntBASIC1.46□□□□□ -2.18
SCN1BQ07699 MTND4P17-201ENST00000470444 350 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms