Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CKAP4Q07065 MIR449A-201ENST00000362113 91 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 RNU6-1301P-201ENST00000362724 104 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 RNU5F-3P-201ENST00000363767 117 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 RNU6-873P-201ENST00000363833 107 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 RNU6-280P-201ENST00000364145 104 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 RNY3P11-201ENST00000364153 102 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 Y_RNA.216-201ENST00000364205 93 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 SNORA18.2-201ENST00000383865 132 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 RNU6-541P-201ENST00000384709 110 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 MIR549A-201ENST00000385268 96 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 MIR758-201ENST00000390227 88 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 RNU2-32P-201ENST00000411193 191 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.49□□□□□ -2.17
CKAP4Q07065 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.49□□□□□ -2.17
CKAP4Q07065 AL354695.1-201ENST00000427935 228 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.49□□□□□ -2.17
CKAP4Q07065 AC004386.2-201ENST00000441858 148 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 AC009237.7-201ENST00000447357 229 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 MTCO3P8-201ENST00000453691 755 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 AC112492.4-201ENST00000456549 352 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 SNORA25.10-201ENST00000515926 124 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 RNU6-344P-201ENST00000516635 111 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 RNU6-988P-201ENST00000519081 107 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.49□□□□□ -2.17
CKAP4Q07065 NDUFA5P6-201ENST00000542110 379 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 AL442663.2-201ENST00000554385 511 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.49□□□□□ -2.17
CKAP4Q07065 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.49□□□□□ -2.17
CKAP4Q07065 U2.1-201ENST00000618978 145 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 MIR1248-201ENST00000629190 106 ntBASIC1.49□□□□□ -2.17
CKAP4Q07065 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
CKAP4Q07065 Y_RNA.39-201ENST00000362620 98 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 Y_RNA.80-201ENST00000362996 102 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 Y_RNA.202-201ENST00000364083 110 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 RNU6-611P-201ENST00000384276 104 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 RNU6-318P-201ENST00000384283 103 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 SNORA67.2-201ENST00000384300 149 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 RNY3P4-201ENST00000384428 101 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
CKAP4Q07065 MIR934-201ENST00000401241 83 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 MIR320B2-201ENST00000408479 138 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 Y_RNA.605-201ENST00000410577 105 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
CKAP4Q07065 AC114482.1-201ENST00000418010 247 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 AC096644.2-201ENST00000429278 159 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.48□□□□□ -2.17
CKAP4Q07065 RNU7-87P-201ENST00000459343 62 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 RNU6-970P-201ENST00000516312 107 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 SNORA25.14-201ENST00000516481 132 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 RNU6-1098P-201ENST00000516772 96 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 SNORA31.24-201ENST00000517232 57 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.48□□□□□ -2.17
CKAP4Q07065 AP003072.1-201ENST00000531740 145 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 AL442163.3-201ENST00000554110 156 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 MIR5188-201ENST00000583467 113 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 AC022432.1-201ENST00000595739 310 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 AC083806.3-201ENST00000614016 455 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 AL138825.1-201ENST00000618587 192 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.48□□□□□ -2.17
CKAP4Q07065 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.48□□□□□ -2.17
CKAP4Q07065 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.48□□□□□ -2.17
CKAP4Q07065 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
CKAP4Q07065 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
CKAP4Q07065 MIR126-201ENST00000362291 85 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 U8.1-201ENST00000362843 134 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 SNORA33.2-201ENST00000365413 134 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 AC117470.1-201ENST00000381974 330 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 RNU6-1145P-201ENST00000384246 107 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 MIR329-1-201ENST00000385028 80 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 MIR504-201ENST00000385065 83 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 Y_RNA.645-201ENST00000391229 102 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 MRPL42P3-201ENST00000401492 326 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 RNU6-1001P-201ENST00000411265 100 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 SNRPGP13-201ENST00000442212 177 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 AC007395.1-201ENST00000451333 677 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.47□□□□□ -2.17
CKAP4Q07065 RNU7-169P-201ENST00000459456 61 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 RPS23P5-201ENST00000495419 428 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 AC093852.1-201ENST00000503587 266 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 ATP5EP1-201ENST00000510257 156 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.47□□□□□ -2.17
CKAP4Q07065 MIR449C-201ENST00000516047 92 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 RN7SKP49-201ENST00000516675 260 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 AC091144.1-201ENST00000519573 138 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 AC093023.1-201ENST00000547375 507 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 AC006600.1-201ENST00000572529 153 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 MIR5695-201ENST00000579717 85 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.47□□□□□ -2.17
CKAP4Q07065 Y_RNA.812-201ENST00000610788 101 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 Y_RNA.784-201ENST00000613803 101 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 Y_RNA.787-201ENST00000616522 101 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 Y_RNA.780-201ENST00000617336 101 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 Y_RNA.801-201ENST00000619005 101 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.47□□□□□ -2.17
CKAP4Q07065 AC005592.1-201ENST00000566527 1640 ntBASIC1.47□□□□□ -2.17
CKAP4Q07065 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.47□□□□□ -2.17
CKAP4Q07065 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
CKAP4Q07065 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.46□□□□□ -2.17
CKAP4Q07065 Y_RNA.27-201ENST00000362540 103 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms