Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RNU6-593P-201ENST00000364716 112 ntBASIC1.59□□□□□ -2.15
GABPAQ06546 Y_RNA.339-201ENST00000365325 102 ntBASIC1.59□□□□□ -2.15
GABPAQ06546 Y_RNA.482-201ENST00000384377 111 ntBASIC1.59□□□□□ -2.15
GABPAQ06546 Y_RNA.490-201ENST00000384413 102 ntBASIC1.59□□□□□ -2.15
GABPAQ06546 MIR548B-201ENST00000385247 97 ntBASIC1.59□□□□□ -2.15
GABPAQ06546 MIR1253-201ENST00000408273 105 ntBASIC1.59□□□□□ -2.15
GABPAQ06546 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.59□□□□□ -2.15
GABPAQ06546 RNU1-123P-201ENST00000458950 160 ntBASIC1.59□□□□□ -2.15
GABPAQ06546 RPL7P42-201ENST00000481005 679 ntBASIC1.59□□□□□ -2.15
GABPAQ06546 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.59□□□□□ -2.15
GABPAQ06546 RNA5SP61-201ENST00000516453 100 ntBASIC1.59□□□□□ -2.15
GABPAQ06546 Y_RNA.708-201ENST00000516950 96 ntBASIC1.59□□□□□ -2.15
GABPAQ06546 MIR5695-201ENST00000579717 85 ntBASIC1.59□□□□□ -2.15
GABPAQ06546 AC069114.2-201ENST00000604699 304 ntBASIC1.59□□□□□ -2.15
GABPAQ06546 AC009229.3-201ENST00000608056 282 ntBASIC1.59□□□□□ -2.15
GABPAQ06546 PISRT1.1-201ENST00000616930 107 ntBASIC1.59□□□□□ -2.15
GABPAQ06546 snoZ196.1-201ENST00000625269 89 ntBASIC1.59□□□□□ -2.15
GABPAQ06546 AC068205.3-201ENST00000636385 468 ntBASIC1.59□□□□□ -2.15
GABPAQ06546 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
GABPAQ06546 AC010615.1-201ENST00000594254 1764 ntBASIC1.58□□□□□ -2.16
GABPAQ06546 Y_RNA.88-201ENST00000363029 99 ntBASIC1.58□□□□□ -2.16
GABPAQ06546 Y_RNA.106-201ENST00000363189 100 ntBASIC1.58□□□□□ -2.16
GABPAQ06546 RNU5F-3P-201ENST00000363767 117 ntBASIC1.58□□□□□ -2.16
GABPAQ06546 Y_RNA.179-201ENST00000363844 90 ntBASIC1.58□□□□□ -2.16
GABPAQ06546 RNU4-42P-201ENST00000364738 142 ntBASIC1.58□□□□□ -2.16
GABPAQ06546 RNU6-53P-201ENST00000365367 106 ntBASIC1.58□□□□□ -2.16
GABPAQ06546 RNU6-439P-201ENST00000384188 106 ntBASIC1.58□□□□□ -2.16
GABPAQ06546 AL117342.1-201ENST00000404861 406 ntBASIC1.58□□□□□ -2.16
GABPAQ06546 RNA5SP504-201ENST00000410676 117 ntBASIC1.58□□□□□ -2.16
GABPAQ06546 MTND3P23-201ENST00000431980 347 ntBASIC1.58□□□□□ -2.16
GABPAQ06546 HMGN2P34-201ENST00000437647 269 ntBASIC1.58□□□□□ -2.16
GABPAQ06546 MTND3P10-201ENST00000450967 341 ntBASIC1.58□□□□□ -2.16
GABPAQ06546 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.58□□□□□ -2.16
GABPAQ06546 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.58□□□□□ -2.16
GABPAQ06546 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.58□□□□□ -2.16
GABPAQ06546 MIR338-201ENST00000636369 67 ntBASIC1.58□□□□□ -2.16
GABPAQ06546 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
GABPAQ06546 Y_RNA.184-201ENST00000363884 108 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 RNU6-1019P-201ENST00000364424 107 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 Y_RNA.279-201ENST00000364763 95 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 Y_RNA.415-201ENST00000384012 112 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 RNU6-793P-201ENST00000384233 104 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 RNU6-296P-201ENST00000384608 107 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 RNU6-417P-201ENST00000384712 107 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 RNU6-331P-201ENST00000384724 107 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 MIR520A-201ENST00000384862 85 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 MIR10B-201ENST00000385011 110 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 RNU6-700P-201ENST00000391043 107 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
GABPAQ06546 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.57□□□□□ -2.16
GABPAQ06546 AL353997.1-201ENST00000432936 108 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 HSPE1P21-201ENST00000438283 308 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.57□□□□□ -2.16
GABPAQ06546 RNU7-87P-201ENST00000459343 62 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 RPL31P58-201ENST00000469001 379 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 AC091179.3-201ENST00000474761 144 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 HMGN1P13-201ENST00000505795 138 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 AC103851.1-201ENST00000506833 274 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 RNU6-1146P-201ENST00000516282 102 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.57□□□□□ -2.16
GABPAQ06546 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.57□□□□□ -2.16
GABPAQ06546 MZT1P2-201ENST00000604387 248 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 AC005014.2-201ENST00000607795 599 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 AC010999.1-201ENST00000611856 324 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 AC008873.1-201ENST00000625051 138 ntBASIC1.57□□□□□ -2.16
GABPAQ06546 WWP1P1-201ENST00000466609 2769 ntBASIC1.56□□□□□ -2.16
GABPAQ06546 RNU6-222P-201ENST00000362438 107 ntBASIC1.56□□□□□ -2.16
GABPAQ06546 RNY1P16-201ENST00000363063 111 ntBASIC1.56□□□□□ -2.16
GABPAQ06546 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
GABPAQ06546 SNORA40.6-201ENST00000391153 128 ntBASIC1.56□□□□□ -2.16
GABPAQ06546 RNA5SP247-201ENST00000411181 105 ntBASIC1.56□□□□□ -2.16
GABPAQ06546 EBAG9P1-201ENST00000418955 543 ntBASIC1.56□□□□□ -2.16
GABPAQ06546 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.56□□□□□ -2.16
GABPAQ06546 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.56□□□□□ -2.16
GABPAQ06546 USP9YP16-201ENST00000430287 407 ntBASIC1.56□□□□□ -2.16
GABPAQ06546 AC245047.4-201ENST00000433189 144 ntBASIC1.56□□□□□ -2.16
GABPAQ06546 RPL23AP50-201ENST00000434149 455 ntBASIC1.56□□□□□ -2.16
GABPAQ06546 USP9YP23-201ENST00000455085 407 ntBASIC1.56□□□□□ -2.16
GABPAQ06546 SNORA44.1-201ENST00000517031 108 ntBASIC1.56□□□□□ -2.16
GABPAQ06546 AL157834.3-201ENST00000615543 103 ntBASIC1.56□□□□□ -2.16
GABPAQ06546 AC099654.5-201ENST00000636479 350 ntBASIC1.56□□□□□ -2.16
GABPAQ06546 MTND5P16-201ENST00000460269 1703 ntBASIC1.56□□□□□ -2.16
GABPAQ06546 MTND5P10-201ENST00000603719 1809 ntBASIC1.56□□□□□ -2.16
GABPAQ06546 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.56□□□□□ -2.16
GABPAQ06546 MIR337-201ENST00000362281 93 ntBASIC1.55□□□□□ -2.16
GABPAQ06546 snoU2-30.2-201ENST00000362805 70 ntBASIC1.55□□□□□ -2.16
GABPAQ06546 Y_RNA.226-201ENST00000364337 114 ntBASIC1.55□□□□□ -2.16
GABPAQ06546 Y_RNA.404-201ENST00000383978 102 ntBASIC1.55□□□□□ -2.16
GABPAQ06546 MIR190B-201ENST00000401119 79 ntBASIC1.55□□□□□ -2.16
GABPAQ06546 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.55□□□□□ -2.16
GABPAQ06546 CST2P1-201ENST00000425770 87 ntBASIC1.55□□□□□ -2.16
GABPAQ06546 HSPE1P9-201ENST00000440046 311 ntBASIC1.55□□□□□ -2.16
GABPAQ06546 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.55□□□□□ -2.16
GABPAQ06546 RPL36AP21-201ENST00000490372 323 ntBASIC1.55□□□□□ -2.16
GABPAQ06546 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.55□□□□□ -2.16
GABPAQ06546 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.55□□□□□ -2.16
GABPAQ06546 RNU6-107P-201ENST00000516643 102 ntBASIC1.55□□□□□ -2.16
GABPAQ06546 AC025647.1-201ENST00000517879 253 ntBASIC1.55□□□□□ -2.16
GABPAQ06546 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.55□□□□□ -2.16
GABPAQ06546 AL121579.1-201ENST00000555129 305 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms