Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MTATP6P15-201ENST00000527233 835 ntBASIC-0.55□□□□□ -2.5
HIST1H1AQ02539 MIR3118-1-201ENST00000581787 76 ntBASIC-0.55□□□□□ -2.5
HIST1H1AQ02539 AP000907.4-201ENST00000604143 237 ntBASIC-0.55□□□□□ -2.5
HIST1H1AQ02539 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.55□□□□□ -2.5
HIST1H1AQ02539 RNU6-413P-201ENST00000384115 107 ntBASIC-0.56□□□□□ -2.5
HIST1H1AQ02539 MIR1302-7-201ENST00000408841 72 ntBASIC-0.56□□□□□ -2.5
HIST1H1AQ02539 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.56□□□□□ -2.5
HIST1H1AQ02539 SNORD4A-201ENST00000459174 72 ntBASIC-0.56□□□□□ -2.5
HIST1H1AQ02539 AC022616.6-201ENST00000520479 119 ntBASIC-0.56□□□□□ -2.5
HIST1H1AQ02539 AL158211.1-201ENST00000566763 763 ntBASIC-0.56□□□□□ -2.5
HIST1H1AQ02539 AL355073.2-201ENST00000612106 557 ntBASIC-0.56□□□□□ -2.5
HIST1H1AQ02539 uc_338.6-201ENST00000613544 171 ntBASIC-0.56□□□□□ -2.5
HIST1H1AQ02539 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.56□□□□□ -2.5
HIST1H1AQ02539 AC019226.2-201ENST00000625973 424 ntBASIC-0.56□□□□□ -2.5
HIST1H1AQ02539 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
HIST1H1AQ02539 RNA5SP257-201ENST00000363023 116 ntBASIC-0.57□□□□□ -2.5
HIST1H1AQ02539 RNU6-433P-201ENST00000363216 104 ntBASIC-0.57□□□□□ -2.5
HIST1H1AQ02539 RNA5SP275-201ENST00000363936 118 ntBASIC-0.57□□□□□ -2.5
HIST1H1AQ02539 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.57□□□□□ -2.5
HIST1H1AQ02539 MIR558-201ENST00000384920 94 ntBASIC-0.57□□□□□ -2.5
HIST1H1AQ02539 MIR892B-201ENST00000401279 77 ntBASIC-0.57□□□□□ -2.5
HIST1H1AQ02539 RPS24P1-201ENST00000438550 371 ntBASIC-0.57□□□□□ -2.5
HIST1H1AQ02539 MTCO2P29-201ENST00000465212 189 ntBASIC-0.57□□□□□ -2.5
HIST1H1AQ02539 AC010493.1-201ENST00000513479 292 ntBASIC-0.57□□□□□ -2.5
HIST1H1AQ02539 SNORA74.3-201ENST00000517108 154 ntBASIC-0.57□□□□□ -2.5
HIST1H1AQ02539 IGLVI-20-201ENST00000519296 130 ntBASIC-0.57□□□□□ -2.5
HIST1H1AQ02539 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.57□□□□□ -2.5
HIST1H1AQ02539 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
HIST1H1AQ02539 AC103996.1-201ENST00000555468 102 ntBASIC-0.57□□□□□ -2.5
HIST1H1AQ02539 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.57□□□□□ -2.5
HIST1H1AQ02539 AC005776.1-201ENST00000603164 290 ntBASIC-0.57□□□□□ -2.5
HIST1H1AQ02539 AC010999.1-201ENST00000611856 324 ntBASIC-0.57□□□□□ -2.5
HIST1H1AQ02539 MIR6755-201ENST00000619993 66 ntBASIC-0.57□□□□□ -2.5
HIST1H1AQ02539 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.57□□□□□ -2.5
HIST1H1AQ02539 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
HIST1H1AQ02539 RNU6-39P-201ENST00000384344 107 ntBASIC-0.58□□□□□ -2.5
HIST1H1AQ02539 MIR106A-201ENST00000384870 81 ntBASIC-0.58□□□□□ -2.5
HIST1H1AQ02539 MIR452-201ENST00000385020 85 ntBASIC-0.58□□□□□ -2.5
HIST1H1AQ02539 ERHP2-201ENST00000402323 299 ntBASIC-0.58□□□□□ -2.5
HIST1H1AQ02539 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.58□□□□□ -2.5
HIST1H1AQ02539 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.58□□□□□ -2.5
HIST1H1AQ02539 RN7SKP287-201ENST00000516546 266 ntBASIC-0.58□□□□□ -2.5
HIST1H1AQ02539 RNU6-58P-201ENST00000517143 103 ntBASIC-0.58□□□□□ -2.5
HIST1H1AQ02539 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.58□□□□□ -2.5
HIST1H1AQ02539 AC105185.1-201ENST00000518705 535 ntBASIC-0.58□□□□□ -2.5
HIST1H1AQ02539 AC104383.1-201ENST00000530297 370 ntBASIC-0.58□□□□□ -2.5
HIST1H1AQ02539 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.58□□□□□ -2.5
HIST1H1AQ02539 MIR4645-201ENST00000583158 77 ntBASIC-0.58□□□□□ -2.5
HIST1H1AQ02539 AC005176.2-201ENST00000596933 147 ntBASIC-0.58□□□□□ -2.5
HIST1H1AQ02539 AC092447.9-201ENST00000603395 144 ntBASIC-0.58□□□□□ -2.5
HIST1H1AQ02539 ZNF204P-201ENST00000416749 2397 ntBASIC-0.59□□□□□ -2.5
HIST1H1AQ02539 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.59□□□□□ -2.5
HIST1H1AQ02539 SNORD114-28-201ENST00000363610 72 ntBASIC-0.59□□□□□ -2.5
HIST1H1AQ02539 RNU6-641P-201ENST00000384006 107 ntBASIC-0.59□□□□□ -2.5
HIST1H1AQ02539 MTND1P4-201ENST00000435196 415 ntBASIC-0.59□□□□□ -2.5
HIST1H1AQ02539 AC107401.1-201ENST00000503426 685 ntBASIC-0.59□□□□□ -2.5
HIST1H1AQ02539 RNU6-344P-201ENST00000516635 111 ntBASIC-0.59□□□□□ -2.5
HIST1H1AQ02539 RNA5SP454-201ENST00000517231 127 ntBASIC-0.59□□□□□ -2.5
HIST1H1AQ02539 AP002004.2-201ENST00000531656 154 ntBASIC-0.59□□□□□ -2.5
HIST1H1AQ02539 FRG2DP-202ENST00000566967 323 ntBASIC-0.59□□□□□ -2.5
HIST1H1AQ02539 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.59□□□□□ -2.5
HIST1H1AQ02539 AC006386.1-201ENST00000619436 415 ntBASIC-0.59□□□□□ -2.5
HIST1H1AQ02539 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.59□□□□□ -2.5
HIST1H1AQ02539 RNU6-137P-201ENST00000363680 108 ntBASIC-0.6□□□□□ -2.51
HIST1H1AQ02539 RNU6-1303P-201ENST00000364841 107 ntBASIC-0.6□□□□□ -2.51
HIST1H1AQ02539 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.6□□□□□ -2.51
HIST1H1AQ02539 RNU6-827P-201ENST00000365553 106 ntBASIC-0.6□□□□□ -2.51
HIST1H1AQ02539 MIR548H2-201ENST00000408874 88 ntBASIC-0.6□□□□□ -2.51
HIST1H1AQ02539 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.6□□□□□ -2.51
HIST1H1AQ02539 AC096531.1-201ENST00000419107 107 ntBASIC-0.6□□□□□ -2.51
HIST1H1AQ02539 AL031274.1-201ENST00000450334 232 ntBASIC-0.6□□□□□ -2.51
HIST1H1AQ02539 PCNPP5-201ENST00000452246 481 ntBASIC-0.6□□□□□ -2.51
HIST1H1AQ02539 RNU7-56P-201ENST00000458744 62 ntBASIC-0.6□□□□□ -2.51
HIST1H1AQ02539 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.6□□□□□ -2.51
HIST1H1AQ02539 AC116353.3-201ENST00000511215 249 ntBASIC-0.6□□□□□ -2.51
HIST1H1AQ02539 MRPS36P4-201ENST00000534436 298 ntBASIC-0.6□□□□□ -2.51
HIST1H1AQ02539 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-0.6□□□□□ -2.51
HIST1H1AQ02539 MIR4804-201ENST00000581683 73 ntBASIC-0.6□□□□□ -2.51
HIST1H1AQ02539 MIR4438-201ENST00000585271 93 ntBASIC-0.6□□□□□ -2.51
HIST1H1AQ02539 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.6□□□□□ -2.51
HIST1H1AQ02539 SNORA1B-201ENST00000362535 133 ntBASIC-0.61□□□□□ -2.51
HIST1H1AQ02539 SNORA1.1-201ENST00000364671 133 ntBASIC-0.61□□□□□ -2.51
HIST1H1AQ02539 RNU6-923P-201ENST00000364753 107 ntBASIC-0.61□□□□□ -2.51
HIST1H1AQ02539 SNORD14.1-201ENST00000365609 90 ntBASIC-0.61□□□□□ -2.51
HIST1H1AQ02539 MTND3P20-201ENST00000407663 186 ntBASIC-0.61□□□□□ -2.51
HIST1H1AQ02539 SNORD100-201ENST00000408573 76 ntBASIC-0.61□□□□□ -2.51
HIST1H1AQ02539 MIR1185-2-201ENST00000408687 86 ntBASIC-0.61□□□□□ -2.51
HIST1H1AQ02539 ZNF885P-201ENST00000420174 1098 ntBASIC-0.61□□□□□ -2.51
HIST1H1AQ02539 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.61□□□□□ -2.51
HIST1H1AQ02539 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-0.61□□□□□ -2.51
HIST1H1AQ02539 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.61□□□□□ -2.51
HIST1H1AQ02539 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.61□□□□□ -2.51
HIST1H1AQ02539 AC007215.1-201ENST00000464893 276 ntBASIC-0.61□□□□□ -2.51
HIST1H1AQ02539 RNU7-43P-201ENST00000516554 64 ntBASIC-0.61□□□□□ -2.51
HIST1H1AQ02539 RNA5SP285-201ENST00000516619 119 ntBASIC-0.61□□□□□ -2.51
HIST1H1AQ02539 MIR2115-201ENST00000516657 100 ntBASIC-0.61□□□□□ -2.51
HIST1H1AQ02539 AC098679.4-201ENST00000624241 654 ntBASIC-0.61□□□□□ -2.51
HIST1H1AQ02539 AC027279.3-201ENST00000625055 122 ntBASIC-0.61□□□□□ -2.51
HIST1H1AQ02539 AL445984.1-201ENST00000637834 659 ntBASIC-0.61□□□□□ -2.51
HIST1H1AQ02539 MIR6759-201ENST00000638110 65 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms