Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 RNU2-34P-201ENST00000516534 121 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 RNU6-344P-201ENST00000516635 111 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 AP002004.2-201ENST00000531656 154 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 ADI1P3-201ENST00000549509 470 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.05□□□□□ -2.42
COL7A1Q02388 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.05□□□□□ -2.42
COL7A1Q02388 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.05□□□□□ -2.42
COL7A1Q02388 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.05□□□□□ -2.42
COL7A1Q02388 AL357312.1-201ENST00000603879 298 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 BX284668.6-201ENST00000606899 438 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 AL136317.1-201ENST00000612653 226 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 AC008250.2-201ENST00000615261 205 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 RNY4P16-201ENST00000364768 94 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 RNU6-396P-201ENST00000365369 105 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 U6.112-201ENST00000384129 70 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 MIR496-201ENST00000385226 102 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 MIR643-201ENST00000385267 97 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
COL7A1Q02388 RNA5SP109-201ENST00000391010 116 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 AL590084.2-201ENST00000401481 382 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 RNU2-59P-201ENST00000410482 191 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 RNU6-370P-201ENST00000411008 104 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 RNA5SP111-201ENST00000411386 101 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 RPS24P1-201ENST00000438550 371 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL7A1Q02388 AC114878.1-201ENST00000441166 358 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 AC079781.2-201ENST00000446424 169 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 MTND4P18-201ENST00000447010 465 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL7A1Q02388 AC022364.2-201ENST00000457963 554 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL7A1Q02388 SNORA40.12-201ENST00000516329 111 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 RNU6-504P-201ENST00000516568 104 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 RNU2-12P-201ENST00000517216 168 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 RNU7-128P-201ENST00000517247 62 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 RNU2-60P-201ENST00000517290 128 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 AC006600.1-201ENST00000572529 153 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 MTND1P15-201ENST00000579262 949 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 AC004223.2-201ENST00000590309 544 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 AC090186.1-201ENST00000605991 572 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 AL451064.1-201ENST00000607718 471 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 AL354696.1-201ENST00000614652 497 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 AL031667.3-201ENST00000620124 655 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 RMST_7.1-201ENST00000621935 268 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 AC244015.1-201ENST00000622301 99 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 AP000943.4-201ENST00000622912 357 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 AL359697.1-201ENST00000624879 587 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 AC010608.3-201ENST00000625048 527 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 MTND4P4-201ENST00000439033 1366 ntBASIC-0.05□□□□□ -2.42
COL7A1Q02388 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.06□□□□□ -2.42
COL7A1Q02388 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 RNU4-1-201ENST00000363925 141 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 RNA5SP48-201ENST00000363969 126 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 RNU6-207P-201ENST00000384137 107 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 SNORA24.1-201ENST00000384401 135 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 MIR520C-201ENST00000385005 87 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 MTCO2P33-201ENST00000402100 465 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 ELOCP21-201ENST00000412558 336 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC090960.1-201ENST00000421072 306 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL7A1Q02388 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.06□□□□□ -2.42
COL7A1Q02388 MTCO1P5-201ENST00000433573 344 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 MTATP6P16-201ENST00000434543 526 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL7A1Q02388 MTCO1P19-201ENST00000443487 500 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 RPL39P39-201ENST00000455840 151 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 RNU7-165P-201ENST00000458864 60 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 SNORD54-201ENST00000459159 67 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL7A1Q02388 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC093809.1-201ENST00000509155 340 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 RNU1-142P-201ENST00000516682 145 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC105185.1-201ENST00000518705 535 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC106038.2-201ENST00000520706 568 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC068587.5-201ENST00000528506 175 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC023157.2-201ENST00000540596 141 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC023050.3-201ENST00000541142 333 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL7A1Q02388 VN1R87P-201ENST00000596706 487 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC120024.3-201ENST00000603167 156 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC092447.9-201ENST00000603395 144 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC104695.3-201ENST00000604052 296 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC112187.2-201ENST00000604345 283 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 SUMO2P14-201ENST00000604488 293 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AL356157.2-201ENST00000605122 111 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 SNORA25.18-201ENST00000607153 114 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC022893.3-201ENST00000607665 437 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC131235.4-201ENST00000609288 620 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AP001033.2-201ENST00000609701 1003 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC138749.5-201ENST00000611461 208 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC122133.1-201ENST00000613964 233 ntBASIC-0.06□□□□□ -2.42
COL7A1Q02388 AC022960.3-201ENST00000619794 441 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms