Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 RNU4-62P-201ENST00000410125 130 ntBASIC1.09□□□□□ -2.23
CBX1P83916 RPL30P16-201ENST00000419341 429 ntBASIC1.09□□□□□ -2.23
CBX1P83916 AC108667.1-201ENST00000428618 249 ntBASIC1.09□□□□□ -2.23
CBX1P83916 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.09□□□□□ -2.23
CBX1P83916 MTND1P29-201ENST00000448112 647 ntBASIC1.09□□□□□ -2.23
CBX1P83916 AC091179.3-201ENST00000474761 144 ntBASIC1.09□□□□□ -2.23
CBX1P83916 AL163540.1-201ENST00000485382 386 ntBASIC1.09□□□□□ -2.23
CBX1P83916 RPL30P10-201ENST00000488148 337 ntBASIC1.09□□□□□ -2.23
CBX1P83916 RNU7-99P-201ENST00000516271 62 ntBASIC1.09□□□□□ -2.23
CBX1P83916 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.09□□□□□ -2.23
CBX1P83916 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.09□□□□□ -2.23
CBX1P83916 7SK.7-201ENST00000603504 247 ntBASIC1.09□□□□□ -2.23
CBX1P83916 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.09□□□□□ -2.23
CBX1P83916 AC009248.2-201ENST00000619826 254 ntBASIC1.09□□□□□ -2.23
CBX1P83916 RNU6-451P-201ENST00000362921 107 ntBASIC1.08□□□□□ -2.24
CBX1P83916 Y_RNA.135-201ENST00000363439 95 ntBASIC1.08□□□□□ -2.24
CBX1P83916 RNY3P3-201ENST00000363816 102 ntBASIC1.08□□□□□ -2.24
CBX1P83916 SNORA70.7-201ENST00000384159 133 ntBASIC1.08□□□□□ -2.24
CBX1P83916 RNU6-17P-201ENST00000384245 107 ntBASIC1.08□□□□□ -2.24
CBX1P83916 RNU6-18P-201ENST00000384527 107 ntBASIC1.08□□□□□ -2.24
CBX1P83916 RNU6-159P-201ENST00000391080 106 ntBASIC1.08□□□□□ -2.24
CBX1P83916 RPL23AP36-201ENST00000413895 458 ntBASIC1.08□□□□□ -2.24
CBX1P83916 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.08□□□□□ -2.24
CBX1P83916 RNA5SP404-201ENST00000517118 132 ntBASIC1.08□□□□□ -2.24
CBX1P83916 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.08□□□□□ -2.24
CBX1P83916 MTND2P38-201ENST00000522536 667 ntBASIC1.08□□□□□ -2.24
CBX1P83916 UBL5P4-201ENST00000562584 236 ntBASIC1.08□□□□□ -2.24
CBX1P83916 FRG2DP-202ENST00000566967 323 ntBASIC1.08□□□□□ -2.24
CBX1P83916 MIR4421-201ENST00000578133 69 ntBASIC1.08□□□□□ -2.24
CBX1P83916 PIGPP4-201ENST00000584447 307 ntBASIC1.08□□□□□ -2.24
CBX1P83916 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.08□□□□□ -2.24
CBX1P83916 AL391987.6-201ENST00000305671 199 ntBASIC1.07□□□□□ -2.24
CBX1P83916 Y_RNA.38-201ENST00000362617 102 ntBASIC1.07□□□□□ -2.24
CBX1P83916 SNORA25-201ENST00000384384 134 ntBASIC1.07□□□□□ -2.24
CBX1P83916 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.07□□□□□ -2.24
CBX1P83916 RNU7-94P-201ENST00000459576 63 ntBASIC1.07□□□□□ -2.24
CBX1P83916 RNU6-165P-201ENST00000517170 99 ntBASIC1.07□□□□□ -2.24
CBX1P83916 APOOP3-201ENST00000536787 586 ntBASIC1.07□□□□□ -2.24
CBX1P83916 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.07□□□□□ -2.24
CBX1P83916 MIR3672-201ENST00000584290 82 ntBASIC1.07□□□□□ -2.24
CBX1P83916 BX284668.6-201ENST00000606899 438 ntBASIC1.07□□□□□ -2.24
CBX1P83916 AL021879.1-201ENST00000611756 288 ntBASIC1.07□□□□□ -2.24
CBX1P83916 AL353770.2-201ENST00000620024 78 ntBASIC1.07□□□□□ -2.24
CBX1P83916 AL513423.1-201ENST00000621695 132 ntBASIC1.07□□□□□ -2.24
CBX1P83916 MIR1321-201ENST00000637766 79 ntBASIC1.07□□□□□ -2.24
CBX1P83916 Y_RNA.100-201ENST00000363141 102 ntBASIC1.06□□□□□ -2.24
CBX1P83916 Y_RNA.179-201ENST00000363844 90 ntBASIC1.06□□□□□ -2.24
CBX1P83916 Y_RNA.212-201ENST00000364177 102 ntBASIC1.06□□□□□ -2.24
CBX1P83916 Y_RNA.414-201ENST00000384011 101 ntBASIC1.06□□□□□ -2.24
CBX1P83916 RNU6-332P-201ENST00000391193 108 ntBASIC1.06□□□□□ -2.24
CBX1P83916 MTATP6P13-201ENST00000438531 667 ntBASIC1.06□□□□□ -2.24
CBX1P83916 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.06□□□□□ -2.24
CBX1P83916 AC092991.1-201ENST00000477176 376 ntBASIC1.06□□□□□ -2.24
CBX1P83916 AC134698.4-201ENST00000523451 826 ntBASIC1.06□□□□□ -2.24
CBX1P83916 AL162424.1-201ENST00000602325 221 ntBASIC1.06□□□□□ -2.24
CBX1P83916 AC073413.2-201ENST00000604332 360 ntBASIC1.06□□□□□ -2.24
CBX1P83916 AL022345.2-201ENST00000606307 135 ntBASIC1.06□□□□□ -2.24
CBX1P83916 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
CBX1P83916 AC027335.2-201ENST00000624030 375 ntBASIC1.06□□□□□ -2.24
CBX1P83916 AC091895.1-201ENST00000624494 256 ntBASIC1.06□□□□□ -2.24
CBX1P83916 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.06□□□□□ -2.24
CBX1P83916 SNORD3E-202ENST00000627253 216 ntBASIC1.06□□□□□ -2.24
CBX1P83916 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.06□□□□□ -2.24
CBX1P83916 RNU1-22P-201ENST00000363334 158 ntBASIC1.05□□□□□ -2.24
CBX1P83916 SNORD116-2-201ENST00000384274 95 ntBASIC1.05□□□□□ -2.24
CBX1P83916 Y_RNA.559-201ENST00000384686 107 ntBASIC1.05□□□□□ -2.24
CBX1P83916 SNORD116-6-201ENST00000384711 96 ntBASIC1.05□□□□□ -2.24
CBX1P83916 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
CBX1P83916 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.05□□□□□ -2.24
CBX1P83916 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.05□□□□□ -2.24
CBX1P83916 MTND4P18-201ENST00000447010 465 ntBASIC1.05□□□□□ -2.24
CBX1P83916 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.05□□□□□ -2.24
CBX1P83916 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.05□□□□□ -2.24
CBX1P83916 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.05□□□□□ -2.24
CBX1P83916 AC093303.1-201ENST00000514549 295 ntBASIC1.05□□□□□ -2.24
CBX1P83916 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.05□□□□□ -2.24
CBX1P83916 MIR5696-201ENST00000578474 85 ntBASIC1.05□□□□□ -2.24
CBX1P83916 MIR5695-201ENST00000579717 85 ntBASIC1.05□□□□□ -2.24
CBX1P83916 MIR4769-201ENST00000584126 77 ntBASIC1.05□□□□□ -2.24
CBX1P83916 MIR4438-201ENST00000585271 93 ntBASIC1.05□□□□□ -2.24
CBX1P83916 AC073349.3-201ENST00000617616 186 ntBASIC1.05□□□□□ -2.24
CBX1P83916 SNORD116-11-201ENST00000383882 92 ntBASIC1.04□□□□□ -2.24
CBX1P83916 RNU6-505P-201ENST00000384427 107 ntBASIC1.04□□□□□ -2.24
CBX1P83916 MIR222-201ENST00000384992 110 ntBASIC1.04□□□□□ -2.24
CBX1P83916 SNORA12.1-201ENST00000390873 148 ntBASIC1.04□□□□□ -2.24
CBX1P83916 BTF3P4-201ENST00000418852 495 ntBASIC1.04□□□□□ -2.24
CBX1P83916 AC243428.1-201ENST00000421099 264 ntBASIC1.04□□□□□ -2.24
CBX1P83916 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.04□□□□□ -2.24
CBX1P83916 RNU7-95P-201ENST00000459222 64 ntBASIC1.04□□□□□ -2.24
CBX1P83916 RNU7-175P-201ENST00000515915 61 ntBASIC1.04□□□□□ -2.24
CBX1P83916 SNORD116-28-201ENST00000516123 91 ntBASIC1.04□□□□□ -2.24
CBX1P83916 CYCSP23-201ENST00000519781 313 ntBASIC1.04□□□□□ -2.24
CBX1P83916 AL513534.2-201ENST00000603836 250 ntBASIC1.04□□□□□ -2.24
CBX1P83916 AC106754.2-201ENST00000623006 233 ntBASIC1.04□□□□□ -2.24
CBX1P83916 AC068137.4-201ENST00000638485 296 ntBASIC1.04□□□□□ -2.24
CBX1P83916 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CBX1P83916 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
CBX1P83916 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CBX1P83916 Y_RNA.184-201ENST00000363884 108 ntBASIC1.03□□□□□ -2.24
CBX1P83916 RNU4-76P-201ENST00000364509 141 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms