Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC091304.9-201ENST00000612091 226 ntBASIC-0.04□□□□□ -2.42
HIST1H3AP68431 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.04□□□□□ -2.42
HIST1H3AP68431 AC137590.2-201ENST00000619709 240 ntBASIC-0.04□□□□□ -2.42
HIST1H3AP68431 MIR1-1-201ENST00000362147 71 ntBASIC-0.05□□□□□ -2.42
HIST1H3AP68431 MIR411-201ENST00000362239 96 ntBASIC-0.05□□□□□ -2.42
HIST1H3AP68431 RNU6-222P-201ENST00000362438 107 ntBASIC-0.05□□□□□ -2.42
HIST1H3AP68431 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.05□□□□□ -2.42
HIST1H3AP68431 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.05□□□□□ -2.42
HIST1H3AP68431 SNORD73A-201ENST00000386062 65 ntBASIC-0.05□□□□□ -2.42
HIST1H3AP68431 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.05□□□□□ -2.42
HIST1H3AP68431 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.05□□□□□ -2.42
HIST1H3AP68431 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.05□□□□□ -2.42
HIST1H3AP68431 RNU2-46P-201ENST00000517038 113 ntBASIC-0.05□□□□□ -2.42
HIST1H3AP68431 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.05□□□□□ -2.42
HIST1H3AP68431 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.05□□□□□ -2.42
HIST1H3AP68431 MTND2P32-201ENST00000521584 1038 ntBASIC-0.05□□□□□ -2.42
HIST1H3AP68431 MRPS36P4-201ENST00000534436 298 ntBASIC-0.05□□□□□ -2.42
HIST1H3AP68431 AC023157.2-201ENST00000540596 141 ntBASIC-0.05□□□□□ -2.42
HIST1H3AP68431 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.05□□□□□ -2.42
HIST1H3AP68431 AC022523.2-201ENST00000561045 150 ntBASIC-0.05□□□□□ -2.42
HIST1H3AP68431 MIR4703-201ENST00000577728 79 ntBASIC-0.05□□□□□ -2.42
HIST1H3AP68431 MIR4999-201ENST00000585029 91 ntBASIC-0.05□□□□□ -2.42
HIST1H3AP68431 RNU6-137P-201ENST00000363680 108 ntBASIC-0.06□□□□□ -2.42
HIST1H3AP68431 RNU6-74P-201ENST00000384235 107 ntBASIC-0.06□□□□□ -2.42
HIST1H3AP68431 MIR573-201ENST00000384964 99 ntBASIC-0.06□□□□□ -2.42
HIST1H3AP68431 RNA5SP482-201ENST00000391269 118 ntBASIC-0.06□□□□□ -2.42
HIST1H3AP68431 AL512286.1-201ENST00000439244 400 ntBASIC-0.06□□□□□ -2.42
HIST1H3AP68431 MRPS10P1-201ENST00000448483 130 ntBASIC-0.06□□□□□ -2.42
HIST1H3AP68431 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.06□□□□□ -2.42
HIST1H3AP68431 MTCO3P10-201ENST00000455912 772 ntBASIC-0.06□□□□□ -2.42
HIST1H3AP68431 RPS29P27-201ENST00000463711 170 ntBASIC-0.06□□□□□ -2.42
HIST1H3AP68431 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.06□□□□□ -2.42
HIST1H3AP68431 SNORD27.1-201ENST00000516319 72 ntBASIC-0.06□□□□□ -2.42
HIST1H3AP68431 AP003327.1-201ENST00000529684 127 ntBASIC-0.06□□□□□ -2.42
HIST1H3AP68431 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
HIST1H3AP68431 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.06□□□□□ -2.42
HIST1H3AP68431 MTCO3P23-201ENST00000561363 289 ntBASIC-0.06□□□□□ -2.42
HIST1H3AP68431 MIR3941-201ENST00000582572 103 ntBASIC-0.06□□□□□ -2.42
HIST1H3AP68431 AC015726.2-201ENST00000620112 122 ntBASIC-0.06□□□□□ -2.42
HIST1H3AP68431 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.06□□□□□ -2.42
HIST1H3AP68431 AC006927.3-201ENST00000638789 384 ntBASIC-0.06□□□□□ -2.42
HIST1H3AP68431 MIRLET7C-201ENST00000362160 84 ntBASIC-0.07□□□□□ -2.42
HIST1H3AP68431 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.07□□□□□ -2.42
HIST1H3AP68431 SNORD113.3-201ENST00000364630 78 ntBASIC-0.07□□□□□ -2.42
HIST1H3AP68431 SNORD87-201ENST00000364849 89 ntBASIC-0.07□□□□□ -2.42
HIST1H3AP68431 RNU6-906P-201ENST00000384700 70 ntBASIC-0.07□□□□□ -2.42
HIST1H3AP68431 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
HIST1H3AP68431 MIR891A-201ENST00000401237 79 ntBASIC-0.07□□□□□ -2.42
HIST1H3AP68431 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.07□□□□□ -2.42
HIST1H3AP68431 AF186996.7-201ENST00000492781 209 ntBASIC-0.07□□□□□ -2.42
HIST1H3AP68431 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
HIST1H3AP68431 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.07□□□□□ -2.42
HIST1H3AP68431 SNORA25.12-201ENST00000516202 82 ntBASIC-0.07□□□□□ -2.42
HIST1H3AP68431 AC104383.1-201ENST00000530297 370 ntBASIC-0.07□□□□□ -2.42
HIST1H3AP68431 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.07□□□□□ -2.42
HIST1H3AP68431 AC027288.2-201ENST00000553028 243 ntBASIC-0.07□□□□□ -2.42
HIST1H3AP68431 AC007684.1-201ENST00000609671 477 ntBASIC-0.07□□□□□ -2.42
HIST1H3AP68431 uc_338.11-201ENST00000619132 160 ntBASIC-0.07□□□□□ -2.42
HIST1H3AP68431 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.07□□□□□ -2.42
HIST1H3AP68431 SNORA1B-201ENST00000362535 133 ntBASIC-0.08□□□□□ -2.42
HIST1H3AP68431 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.08□□□□□ -2.42
HIST1H3AP68431 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.08□□□□□ -2.42
HIST1H3AP68431 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
HIST1H3AP68431 MIR487A-201ENST00000385009 80 ntBASIC-0.08□□□□□ -2.42
HIST1H3AP68431 SNORD71-201ENST00000411292 86 ntBASIC-0.08□□□□□ -2.42
HIST1H3AP68431 AC073261.1-201ENST00000429409 121 ntBASIC-0.08□□□□□ -2.42
HIST1H3AP68431 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.08□□□□□ -2.42
HIST1H3AP68431 snoU109.3-201ENST00000459477 145 ntBASIC-0.08□□□□□ -2.42
HIST1H3AP68431 HMGN2P26-201ENST00000463169 339 ntBASIC-0.08□□□□□ -2.42
HIST1H3AP68431 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.08□□□□□ -2.42
HIST1H3AP68431 AC091133.4-201ENST00000511142 308 ntBASIC-0.08□□□□□ -2.42
HIST1H3AP68431 AC105417.1-201ENST00000514691 285 ntBASIC-0.08□□□□□ -2.42
HIST1H3AP68431 RN7SKP164-201ENST00000516138 266 ntBASIC-0.08□□□□□ -2.42
HIST1H3AP68431 RNU6-430P-201ENST00000517078 107 ntBASIC-0.08□□□□□ -2.42
HIST1H3AP68431 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.08□□□□□ -2.42
HIST1H3AP68431 AP001372.4-201ENST00000524889 472 ntBASIC-0.08□□□□□ -2.42
HIST1H3AP68431 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
HIST1H3AP68431 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.08□□□□□ -2.42
HIST1H3AP68431 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.08□□□□□ -2.42
HIST1H3AP68431 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.08□□□□□ -2.42
HIST1H3AP68431 HIF1AP1-201ENST00000553642 175 ntBASIC-0.08□□□□□ -2.42
HIST1H3AP68431 MIR18A-201ENST00000362310 71 ntBASIC-0.09□□□□□ -2.42
HIST1H3AP68431 MIR562-201ENST00000384894 95 ntBASIC-0.09□□□□□ -2.42
HIST1H3AP68431 MIR1-2-201ENST00000384961 85 ntBASIC-0.09□□□□□ -2.42
HIST1H3AP68431 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.09□□□□□ -2.42
HIST1H3AP68431 HSFY5P-201ENST00000453726 309 ntBASIC-0.09□□□□□ -2.42
HIST1H3AP68431 RNU7-167P-201ENST00000459160 62 ntBASIC-0.09□□□□□ -2.42
HIST1H3AP68431 AC093534.1-201ENST00000504977 132 ntBASIC-0.09□□□□□ -2.42
HIST1H3AP68431 AC005178.1-201ENST00000508392 440 ntBASIC-0.09□□□□□ -2.42
HIST1H3AP68431 AC092436.3-201ENST00000511788 257 ntBASIC-0.09□□□□□ -2.42
HIST1H3AP68431 RNU7-41P-201ENST00000515917 61 ntBASIC-0.09□□□□□ -2.42
HIST1H3AP68431 SNORA62.5-201ENST00000516634 120 ntBASIC-0.09□□□□□ -2.42
HIST1H3AP68431 MTND1P5-201ENST00000517906 940 ntBASIC-0.09□□□□□ -2.42
HIST1H3AP68431 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.09□□□□□ -2.42
HIST1H3AP68431 AP002004.2-201ENST00000531656 154 ntBASIC-0.09□□□□□ -2.42
HIST1H3AP68431 RPL21P9-201ENST00000556149 474 ntBASIC-0.09□□□□□ -2.42
HIST1H3AP68431 MIR4509-3-201ENST00000578671 94 ntBASIC-0.09□□□□□ -2.42
HIST1H3AP68431 MIR4509-2-201ENST00000583920 94 ntBASIC-0.09□□□□□ -2.42
HIST1H3AP68431 Z84480.1-201ENST00000605131 311 ntBASIC-0.09□□□□□ -2.42
HIST1H3AP68431 MIR4509-1-201ENST00000618224 94 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms