Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RNU6-572P-201ENST00000516724 80 ntBASIC-2.22□□□□□ -2.76
RPL39P62891 AC004223.4-201ENST00000612426 332 ntBASIC-2.22□□□□□ -2.76
RPL39P62891 AP000676.3-201ENST00000623299 569 ntBASIC-2.22□□□□□ -2.76
RPL39P62891 MIR520C-201ENST00000385005 87 ntBASIC-2.23□□□□□ -2.77
RPL39P62891 AL365338.1-201ENST00000422282 858 ntBASIC-2.23□□□□□ -2.77
RPL39P62891 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-2.23□□□□□ -2.77
RPL39P62891 RNU7-14P-201ENST00000459331 62 ntBASIC-2.23□□□□□ -2.77
RPL39P62891 AC079382.1-201ENST00000493346 557 ntBASIC-2.23□□□□□ -2.77
RPL39P62891 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-2.23□□□□□ -2.77
RPL39P62891 RNU6-1291P-201ENST00000516591 104 ntBASIC-2.23□□□□□ -2.77
RPL39P62891 AC018448.1-201ENST00000552843 316 ntBASIC-2.23□□□□□ -2.77
RPL39P62891 AC121247.2-201ENST00000604776 136 ntBASIC-2.23□□□□□ -2.77
RPL39P62891 AC064872.1-201ENST00000604823 1072 ntBASIC-2.23□□□□□ -2.77
RPL39P62891 AC104260.1-201ENST00000616660 539 ntBASIC-2.23□□□□□ -2.77
RPL39P62891 TUG1_4.1-201ENST00000619464 181 ntBASIC-2.23□□□□□ -2.77
RPL39P62891 U6.108-201ENST00000637764 58 ntBASIC-2.23□□□□□ -2.77
RPL39P62891 RNU6-1244P-201ENST00000363614 108 ntBASIC-2.24□□□□□ -2.77
RPL39P62891 SNX3P1X-201ENST00000414887 175 ntBASIC-2.24□□□□□ -2.77
RPL39P62891 MTND1P4-201ENST00000435196 415 ntBASIC-2.24□□□□□ -2.77
RPL39P62891 BTBD7P2-201ENST00000441962 620 ntBASIC-2.24□□□□□ -2.77
RPL39P62891 OFD1P3Y-201ENST00000453312 783 ntBASIC-2.24□□□□□ -2.77
RPL39P62891 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-2.24□□□□□ -2.77
RPL39P62891 RPL37P6-201ENST00000460682 294 ntBASIC-2.24□□□□□ -2.77
RPL39P62891 SNORD92-201ENST00000585078 85 ntBASIC-2.24□□□□□ -2.77
RPL39P62891 AP001330.5-201ENST00000607176 411 ntBASIC-2.24□□□□□ -2.77
RPL39P62891 SNORA70.25-201ENST00000612741 95 ntBASIC-2.24□□□□□ -2.77
RPL39P62891 MIR7844-201ENST00000616161 122 ntBASIC-2.24□□□□□ -2.77
RPL39P62891 MIR6851-201ENST00000617060 67 ntBASIC-2.24□□□□□ -2.77
RPL39P62891 MTND5P18-201ENST00000445624 1801 ntBASIC-2.24□□□□□ -2.77
RPL39P62891 RNU4-15P-201ENST00000362613 141 ntBASIC-2.25□□□□□ -2.77
RPL39P62891 RNU6-1229P-201ENST00000364295 107 ntBASIC-2.25□□□□□ -2.77
RPL39P62891 RNU5A-6P-201ENST00000384136 116 ntBASIC-2.25□□□□□ -2.77
RPL39P62891 RNU6-40P-201ENST00000384254 107 ntBASIC-2.25□□□□□ -2.77
RPL39P62891 RNU6-417P-201ENST00000384712 107 ntBASIC-2.25□□□□□ -2.77
RPL39P62891 AL445193.1-201ENST00000441183 141 ntBASIC-2.25□□□□□ -2.77
RPL39P62891 snoU109.2-201ENST00000459316 135 ntBASIC-2.25□□□□□ -2.77
RPL39P62891 RPL23AP75-201ENST00000491601 451 ntBASIC-2.25□□□□□ -2.77
RPL39P62891 RNA5SP461-201ENST00000516451 104 ntBASIC-2.25□□□□□ -2.77
RPL39P62891 RNU1-142P-201ENST00000516682 145 ntBASIC-2.25□□□□□ -2.77
RPL39P62891 RNU6-135P-201ENST00000516769 101 ntBASIC-2.25□□□□□ -2.77
RPL39P62891 Y_RNA.757-201ENST00000578934 114 ntBASIC-2.25□□□□□ -2.77
RPL39P62891 MIR3179-1-201ENST00000578940 84 ntBASIC-2.25□□□□□ -2.77
RPL39P62891 MIR3179-2-201ENST00000579107 84 ntBASIC-2.25□□□□□ -2.77
RPL39P62891 MIR3179-3-201ENST00000579566 84 ntBASIC-2.25□□□□□ -2.77
RPL39P62891 AP000811.1-201ENST00000603803 651 ntBASIC-2.25□□□□□ -2.77
RPL39P62891 MIR3179-4-201ENST00000617599 84 ntBASIC-2.25□□□□□ -2.77
RPL39P62891 MIR382-201ENST00000637119 76 ntBASIC-2.25□□□□□ -2.77
RPL39P62891 Y_RNA.287-201ENST00000364853 94 ntBASIC-2.26□□□□□ -2.77
RPL39P62891 RNU4-66P-201ENST00000365199 138 ntBASIC-2.26□□□□□ -2.77
RPL39P62891 RNU6-455P-201ENST00000384681 107 ntBASIC-2.26□□□□□ -2.77
RPL39P62891 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-2.26□□□□□ -2.77
RPL39P62891 AC091135.1-201ENST00000585943 307 ntBASIC-2.26□□□□□ -2.77
RPL39P62891 AC016597.2-201ENST00000613256 341 ntBASIC-2.26□□□□□ -2.77
RPL39P62891 ZNF204P-201ENST00000416749 2397 ntBASIC-2.27□□□□□ -2.77
RPL39P62891 MIR601-201ENST00000385256 79 ntBASIC-2.27□□□□□ -2.77
RPL39P62891 SNORD64-201ENST00000386683 67 ntBASIC-2.27□□□□□ -2.77
RPL39P62891 AC243428.1-201ENST00000421099 264 ntBASIC-2.27□□□□□ -2.77
RPL39P62891 MTCYBP5-201ENST00000423752 1135 ntBASIC-2.27□□□□□ -2.77
RPL39P62891 FCF1P4-201ENST00000448326 183 ntBASIC-2.27□□□□□ -2.77
RPL39P62891 AC009902.1-201ENST00000519351 183 ntBASIC-2.27□□□□□ -2.77
RPL39P62891 MTND2P38-201ENST00000522536 667 ntBASIC-2.27□□□□□ -2.77
RPL39P62891 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-2.27□□□□□ -2.77
RPL39P62891 MIR4280-201ENST00000582178 76 ntBASIC-2.27□□□□□ -2.77
RPL39P62891 AC012433.1-201ENST00000588916 398 ntBASIC-2.27□□□□□ -2.77
RPL39P62891 AC005562.2-201ENST00000618264 111 ntBASIC-2.27□□□□□ -2.77
RPL39P62891 Y_RNA.35-201ENST00000362601 101 ntBASIC-2.28□□□□□ -2.77
RPL39P62891 RNU5B-2P-201ENST00000363036 113 ntBASIC-2.28□□□□□ -2.77
RPL39P62891 RNU6-702P-201ENST00000364982 107 ntBASIC-2.28□□□□□ -2.77
RPL39P62891 RNU6-1292P-201ENST00000383856 107 ntBASIC-2.28□□□□□ -2.77
RPL39P62891 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-2.28□□□□□ -2.77
RPL39P62891 AC019178.2-201ENST00000423595 505 ntBASIC-2.28□□□□□ -2.77
RPL39P62891 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-2.28□□□□□ -2.77
RPL39P62891 PRDX4P1-201ENST00000507189 574 ntBASIC-2.28□□□□□ -2.77
RPL39P62891 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-2.28□□□□□ -2.77
RPL39P62891 AC008521.1-201ENST00000587471 187 ntBASIC-2.28□□□□□ -2.77
RPL39P62891 AC010999.1-201ENST00000611856 324 ntBASIC-2.28□□□□□ -2.77
RPL39P62891 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-2.29□□□□□ -2.78
RPL39P62891 Y_RNA.365-201ENST00000365537 102 ntBASIC-2.29□□□□□ -2.78
RPL39P62891 MT-TN-201ENST00000387400 73 ntBASIC-2.29□□□□□ -2.78
RPL39P62891 MIR1285-2-201ENST00000408311 88 ntBASIC-2.29□□□□□ -2.78
RPL39P62891 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-2.29□□□□□ -2.78
RPL39P62891 AC020550.1-201ENST00000447385 163 ntBASIC-2.29□□□□□ -2.78
RPL39P62891 AC010493.1-201ENST00000513479 292 ntBASIC-2.29□□□□□ -2.78
RPL39P62891 RNU6-1098P-201ENST00000516772 96 ntBASIC-2.29□□□□□ -2.78
RPL39P62891 AL359999.1-201ENST00000604513 294 ntBASIC-2.29□□□□□ -2.78
RPL39P62891 AC112204.3-201ENST00000623822 332 ntBASIC-2.29□□□□□ -2.78
RPL39P62891 AC132825.6-201ENST00000638861 357 ntBASIC-2.29□□□□□ -2.78
RPL39P62891 RNU6-1216P-201ENST00000362590 107 ntBASIC-2.3□□□□□ -2.78
RPL39P62891 RNU6-1285P-201ENST00000363480 105 ntBASIC-2.3□□□□□ -2.78
RPL39P62891 RNU6-431P-201ENST00000383874 107 ntBASIC-2.3□□□□□ -2.78
RPL39P62891 RNU6-1336P-201ENST00000383886 109 ntBASIC-2.3□□□□□ -2.78
RPL39P62891 SNORA1-201ENST00000384107 130 ntBASIC-2.3□□□□□ -2.78
RPL39P62891 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-2.3□□□□□ -2.78
RPL39P62891 RPS3AP3-201ENST00000411933 242 ntBASIC-2.3□□□□□ -2.78
RPL39P62891 TRIM60P5Y-201ENST00000413946 574 ntBASIC-2.3□□□□□ -2.78
RPL39P62891 USP9YP16-201ENST00000430287 407 ntBASIC-2.3□□□□□ -2.78
RPL39P62891 AC105417.1-201ENST00000514691 285 ntBASIC-2.3□□□□□ -2.78
RPL39P62891 MIR4770-201ENST00000579149 58 ntBASIC-2.3□□□□□ -2.78
RPL39P62891 Y_RNA.283-201ENST00000364798 112 ntBASIC-2.31□□□□□ -2.78
RPL39P62891 Y_RNA.303-201ENST00000364998 94 ntBASIC-2.31□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms