Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 RNU6-191P-201ENST00000516295 94 ntBASIC3.07□□□□□ -1.92
HERVK_113P62684 RNA5SP24-201ENST00000516478 95 ntBASIC3.07□□□□□ -1.92
HERVK_113P62684 RNU5F-4P-201ENST00000516581 114 ntBASIC3.07□□□□□ -1.92
HERVK_113P62684 AC109329.2-201ENST00000519658 482 ntBASIC3.07□□□□□ -1.92
HERVK_113P62684 AL365434.2-201ENST00000607979 234 ntBASIC3.07□□□□□ -1.92
HERVK_113P62684 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HERVK_113P62684 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HERVK_113P62684 RNU6-454P-201ENST00000364292 107 ntBASIC3.06□□□□□ -1.92
HERVK_113P62684 RNU6-1062P-201ENST00000383908 107 ntBASIC3.06□□□□□ -1.92
HERVK_113P62684 Y_RNA.555-201ENST00000384673 110 ntBASIC3.06□□□□□ -1.92
HERVK_113P62684 MIR218-1-201ENST00000384999 110 ntBASIC3.06□□□□□ -1.92
HERVK_113P62684 AC024067.1-201ENST00000426199 223 ntBASIC3.06□□□□□ -1.92
HERVK_113P62684 RN7SL499P-201ENST00000481141 276 ntBASIC3.06□□□□□ -1.92
HERVK_113P62684 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.06□□□□□ -1.92
HERVK_113P62684 RNA5SP282-201ENST00000516355 108 ntBASIC3.06□□□□□ -1.92
HERVK_113P62684 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.06□□□□□ -1.92
HERVK_113P62684 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.06□□□□□ -1.92
HERVK_113P62684 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HERVK_113P62684 MIR7515-201ENST00000637837 67 ntBASIC3.06□□□□□ -1.92
HERVK_113P62684 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
HERVK_113P62684 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
HERVK_113P62684 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.05□□□□□ -1.92
HERVK_113P62684 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HERVK_113P62684 Y_RNA.82-201ENST00000363000 102 ntBASIC3.05□□□□□ -1.92
HERVK_113P62684 Y_RNA.92-201ENST00000363043 102 ntBASIC3.05□□□□□ -1.92
HERVK_113P62684 Y_RNA.235-201ENST00000364412 102 ntBASIC3.05□□□□□ -1.92
HERVK_113P62684 Y_RNA.306-201ENST00000365015 102 ntBASIC3.05□□□□□ -1.92
HERVK_113P62684 Y_RNA.312-201ENST00000365089 102 ntBASIC3.05□□□□□ -1.92
HERVK_113P62684 Y_RNA.322-201ENST00000365151 102 ntBASIC3.05□□□□□ -1.92
HERVK_113P62684 U3.40-201ENST00000408706 208 ntBASIC3.05□□□□□ -1.92
HERVK_113P62684 Y_RNA.650-201ENST00000459002 102 ntBASIC3.05□□□□□ -1.92
HERVK_113P62684 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.05□□□□□ -1.92
HERVK_113P62684 AC107393.1-201ENST00000512403 346 ntBASIC3.05□□□□□ -1.92
HERVK_113P62684 RNU6-1098P-201ENST00000516772 96 ntBASIC3.05□□□□□ -1.92
HERVK_113P62684 Y_RNA.777-201ENST00000516982 102 ntBASIC3.05□□□□□ -1.92
HERVK_113P62684 RNU2-12P-201ENST00000517216 168 ntBASIC3.05□□□□□ -1.92
HERVK_113P62684 CBX3P4-201ENST00000538909 354 ntBASIC3.05□□□□□ -1.92
HERVK_113P62684 Y_RNA.771-201ENST00000598668 102 ntBASIC3.05□□□□□ -1.92
HERVK_113P62684 Y_RNA.789-201ENST00000622480 102 ntBASIC3.05□□□□□ -1.92
HERVK_113P62684 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.05□□□□□ -1.92
HERVK_113P62684 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HERVK_113P62684 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
HERVK_113P62684 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HERVK_113P62684 RNU6-1020P-201ENST00000363684 107 ntBASIC3.04□□□□□ -1.92
HERVK_113P62684 SNORD32B-201ENST00000364460 84 ntBASIC3.04□□□□□ -1.92
HERVK_113P62684 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.04□□□□□ -1.92
HERVK_113P62684 SCARNA11.3-201ENST00000517276 130 ntBASIC3.04□□□□□ -1.92
HERVK_113P62684 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.04□□□□□ -1.92
HERVK_113P62684 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.04□□□□□ -1.92
HERVK_113P62684 MIR3199-1-201ENST00000582434 88 ntBASIC3.04□□□□□ -1.92
HERVK_113P62684 MIR4282-201ENST00000583613 67 ntBASIC3.04□□□□□ -1.92
HERVK_113P62684 AC010620.2-201ENST00000600135 313 ntBASIC3.04□□□□□ -1.92
HERVK_113P62684 Z83818.1-201ENST00000603584 150 ntBASIC3.04□□□□□ -1.92
HERVK_113P62684 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.04□□□□□ -1.92
HERVK_113P62684 AC073349.3-201ENST00000617616 186 ntBASIC3.04□□□□□ -1.92
HERVK_113P62684 CTSLP2-204ENST00000629029 392 ntBASIC3.04□□□□□ -1.92
HERVK_113P62684 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HERVK_113P62684 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.03□□□□□ -1.92
HERVK_113P62684 U3.8-201ENST00000363675 217 ntBASIC3.03□□□□□ -1.92
HERVK_113P62684 RNU6-923P-201ENST00000364753 107 ntBASIC3.03□□□□□ -1.92
HERVK_113P62684 RNU6-1274P-201ENST00000384557 107 ntBASIC3.03□□□□□ -1.92
HERVK_113P62684 MIR1294-201ENST00000408503 142 ntBASIC3.03□□□□□ -1.92
HERVK_113P62684 BTF3P11-201ENST00000426582 477 ntBASIC3.03□□□□□ -1.92
HERVK_113P62684 TOMM22P2-201ENST00000430735 237 ntBASIC3.03□□□□□ -1.92
HERVK_113P62684 RNU7-14P-201ENST00000459331 62 ntBASIC3.03□□□□□ -1.92
HERVK_113P62684 COX6CP14-201ENST00000469580 174 ntBASIC3.03□□□□□ -1.92
HERVK_113P62684 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HERVK_113P62684 RNU6-436P-201ENST00000516171 114 ntBASIC3.03□□□□□ -1.92
HERVK_113P62684 AC087441.2-201ENST00000529141 262 ntBASIC3.03□□□□□ -1.92
HERVK_113P62684 RPL17P51-201ENST00000605218 238 ntBASIC3.03□□□□□ -1.92
HERVK_113P62684 snoU18.1-201ENST00000629629 71 ntBASIC3.03□□□□□ -1.92
HERVK_113P62684 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.03□□□□□ -1.92
HERVK_113P62684 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.03□□□□□ -1.93
HERVK_113P62684 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HERVK_113P62684 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.02□□□□□ -1.93
HERVK_113P62684 AL161431.1-201ENST00000618966 4205 ntBASIC3.02□□□□□ -1.93
HERVK_113P62684 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HERVK_113P62684 Y_RNA.217-201ENST00000364214 105 ntBASIC3.02□□□□□ -1.93
HERVK_113P62684 RNU6-47P-201ENST00000383866 107 ntBASIC3.02□□□□□ -1.93
HERVK_113P62684 SNORA67.2-201ENST00000384300 149 ntBASIC3.02□□□□□ -1.93
HERVK_113P62684 RNU6-886P-201ENST00000384319 105 ntBASIC3.02□□□□□ -1.93
HERVK_113P62684 MIR548B-201ENST00000385247 97 ntBASIC3.02□□□□□ -1.93
HERVK_113P62684 RNU6-1248P-201ENST00000391096 64 ntBASIC3.02□□□□□ -1.93
HERVK_113P62684 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HERVK_113P62684 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.02□□□□□ -1.93
HERVK_113P62684 SNORA3.2-201ENST00000408221 125 ntBASIC3.02□□□□□ -1.93
HERVK_113P62684 COX6CP10-201ENST00000416832 224 ntBASIC3.02□□□□□ -1.93
HERVK_113P62684 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.02□□□□□ -1.93
HERVK_113P62684 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.02□□□□□ -1.93
HERVK_113P62684 RPL30P4-201ENST00000429309 333 ntBASIC3.02□□□□□ -1.93
HERVK_113P62684 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
HERVK_113P62684 Y_RNA.641-201ENST00000459414 105 ntBASIC3.02□□□□□ -1.93
HERVK_113P62684 RNY3P16-201ENST00000516338 101 ntBASIC3.02□□□□□ -1.93
HERVK_113P62684 RN7SKP282-201ENST00000516824 299 ntBASIC3.02□□□□□ -1.93
HERVK_113P62684 AC022559.1-201ENST00000520905 205 ntBASIC3.02□□□□□ -1.93
HERVK_113P62684 AC007536.1-201ENST00000533382 349 ntBASIC3.02□□□□□ -1.93
HERVK_113P62684 MIR3605-201ENST00000583214 100 ntBASIC3.02□□□□□ -1.93
HERVK_113P62684 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.02□□□□□ -1.93
HERVK_113P62684 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
HERVK_113P62684 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 208.9 ms