Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LMO4P61968 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
LMO4P61968 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.91□□□□□ -2.1
LMO4P61968 MIR21-201ENST00000362134 72 ntBASIC1.91□□□□□ -2.1
LMO4P61968 Y_RNA.29-201ENST00000362570 113 ntBASIC1.91□□□□□ -2.1
LMO4P61968 Y_RNA.40-201ENST00000362645 93 ntBASIC1.91□□□□□ -2.1
LMO4P61968 RNU6-1010P-201ENST00000362757 107 ntBASIC1.91□□□□□ -2.1
LMO4P61968 Y_RNA.76-201ENST00000362931 109 ntBASIC1.91□□□□□ -2.1
LMO4P61968 RNU6-1159P-201ENST00000362933 107 ntBASIC1.91□□□□□ -2.1
LMO4P61968 RNU6-626P-201ENST00000363354 107 ntBASIC1.91□□□□□ -2.1
LMO4P61968 Y_RNA.200-201ENST00000364018 102 ntBASIC1.91□□□□□ -2.1
LMO4P61968 RNU1-57P-201ENST00000384491 166 ntBASIC1.91□□□□□ -2.1
LMO4P61968 RNU6-21P-201ENST00000384710 107 ntBASIC1.91□□□□□ -2.1
LMO4P61968 MIR1298-201ENST00000408783 112 ntBASIC1.91□□□□□ -2.1
LMO4P61968 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.91□□□□□ -2.1
LMO4P61968 EIF4EP4-201ENST00000424916 578 ntBASIC1.91□□□□□ -2.1
LMO4P61968 AC018634.1-201ENST00000437554 401 ntBASIC1.91□□□□□ -2.1
LMO4P61968 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.91□□□□□ -2.1
LMO4P61968 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.91□□□□□ -2.1
LMO4P61968 PRELID3BP1-201ENST00000457142 540 ntBASIC1.91□□□□□ -2.1
LMO4P61968 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.91□□□□□ -2.1
LMO4P61968 snoU13.26-201ENST00000459452 105 ntBASIC1.91□□□□□ -2.1
LMO4P61968 SEPT14P8-201ENST00000508026 178 ntBASIC1.91□□□□□ -2.1
LMO4P61968 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.91□□□□□ -2.1
LMO4P61968 RNU7-110P-201ENST00000516891 62 ntBASIC1.91□□□□□ -2.1
LMO4P61968 RNU6-1198P-201ENST00000516904 67 ntBASIC1.91□□□□□ -2.1
LMO4P61968 RNU2-31P-201ENST00000516954 155 ntBASIC1.91□□□□□ -2.1
LMO4P61968 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.91□□□□□ -2.1
LMO4P61968 AC055872.1-201ENST00000570978 278 ntBASIC1.91□□□□□ -2.1
LMO4P61968 AC131280.1-202ENST00000624067 4211 ntBASIC1.91□□□□□ -2.1
LMO4P61968 ZNF204P-201ENST00000416749 2397 ntBASIC1.91□□□□□ -2.1
LMO4P61968 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
LMO4P61968 AC007336.1-201ENST00000576365 3828 ntBASIC1.9□□□□□ -2.1
LMO4P61968 MAPK10-266ENST00000641066 6555 ntBASIC1.9□□□□□ -2.1
LMO4P61968 Y_RNA.44-201ENST00000362676 108 ntBASIC1.9□□□□□ -2.11
LMO4P61968 Y_RNA.150-201ENST00000363562 102 ntBASIC1.9□□□□□ -2.11
LMO4P61968 RNU6-1175P-201ENST00000365200 107 ntBASIC1.9□□□□□ -2.11
LMO4P61968 RNU6-326P-201ENST00000365480 107 ntBASIC1.9□□□□□ -2.11
LMO4P61968 Y_RNA.446-201ENST00000384178 104 ntBASIC1.9□□□□□ -2.11
LMO4P61968 Y_RNA.555-201ENST00000384673 110 ntBASIC1.9□□□□□ -2.11
LMO4P61968 Y_RNA.569-201ENST00000384749 103 ntBASIC1.9□□□□□ -2.11
LMO4P61968 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
LMO4P61968 SNORA53-201ENST00000391141 249 ntBASIC1.9□□□□□ -2.11
LMO4P61968 AL033519.2-201ENST00000403958 392 ntBASIC1.9□□□□□ -2.11
LMO4P61968 RNU5A-5P-201ENST00000411054 116 ntBASIC1.9□□□□□ -2.11
LMO4P61968 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.9□□□□□ -2.11
LMO4P61968 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.9□□□□□ -2.11
LMO4P61968 RPS15AP28-201ENST00000435088 386 ntBASIC1.9□□□□□ -2.11
LMO4P61968 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LMO4P61968 RPL23AP3-201ENST00000453844 468 ntBASIC1.9□□□□□ -2.11
LMO4P61968 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.9□□□□□ -2.11
LMO4P61968 RNA5SP54-201ENST00000516951 92 ntBASIC1.9□□□□□ -2.11
LMO4P61968 AC115990.1-201ENST00000526957 301 ntBASIC1.9□□□□□ -2.11
LMO4P61968 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.9□□□□□ -2.11
LMO4P61968 MZT1P2-201ENST00000604387 248 ntBASIC1.9□□□□□ -2.11
LMO4P61968 AL355297.2-201ENST00000604792 129 ntBASIC1.9□□□□□ -2.11
LMO4P61968 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.9□□□□□ -2.11
LMO4P61968 AC010999.1-201ENST00000611856 324 ntBASIC1.9□□□□□ -2.11
LMO4P61968 AC004792.1-201ENST00000614523 137 ntBASIC1.9□□□□□ -2.11
LMO4P61968 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.9□□□□□ -2.11
LMO4P61968 U4atac.1-201ENST00000618345 95 ntBASIC1.9□□□□□ -2.11
LMO4P61968 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
LMO4P61968 Y_RNA.83-201ENST00000363005 113 ntBASIC1.89□□□□□ -2.11
LMO4P61968 RNU6-529P-201ENST00000363383 104 ntBASIC1.89□□□□□ -2.11
LMO4P61968 RNU6-740P-201ENST00000364734 105 ntBASIC1.89□□□□□ -2.11
LMO4P61968 Y_RNA.418-201ENST00000384029 102 ntBASIC1.89□□□□□ -2.11
LMO4P61968 RNU1-52P-201ENST00000384190 164 ntBASIC1.89□□□□□ -2.11
LMO4P61968 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.89□□□□□ -2.11
LMO4P61968 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.89□□□□□ -2.11
LMO4P61968 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.89□□□□□ -2.11
LMO4P61968 AC007395.1-201ENST00000451333 677 ntBASIC1.89□□□□□ -2.11
LMO4P61968 AC007215.1-201ENST00000464893 276 ntBASIC1.89□□□□□ -2.11
LMO4P61968 AC091179.3-201ENST00000474761 144 ntBASIC1.89□□□□□ -2.11
LMO4P61968 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.89□□□□□ -2.11
LMO4P61968 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.89□□□□□ -2.11
LMO4P61968 RNU5F-2P-201ENST00000516066 82 ntBASIC1.89□□□□□ -2.11
LMO4P61968 RNU6-966P-201ENST00000516479 104 ntBASIC1.89□□□□□ -2.11
LMO4P61968 SNORA25.14-201ENST00000516481 132 ntBASIC1.89□□□□□ -2.11
LMO4P61968 Y_RNA.683-201ENST00000516508 93 ntBASIC1.89□□□□□ -2.11
LMO4P61968 RNU1-104P-201ENST00000517280 175 ntBASIC1.89□□□□□ -2.11
LMO4P61968 IGKV3-31-201ENST00000523109 329 ntBASIC1.89□□□□□ -2.11
LMO4P61968 CYP4A27P-201ENST00000567218 190 ntBASIC1.89□□□□□ -2.11
LMO4P61968 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.89□□□□□ -2.11
LMO4P61968 AC005176.2-201ENST00000596933 147 ntBASIC1.89□□□□□ -2.11
LMO4P61968 AL034555.1-201ENST00000604816 211 ntBASIC1.89□□□□□ -2.11
LMO4P61968 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.89□□□□□ -2.11
LMO4P61968 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.89□□□□□ -2.11
LMO4P61968 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LMO4P61968 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.89□□□□□ -2.11
LMO4P61968 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LMO4P61968 BX322639.1-202ENST00000423987 2213 ntBASIC1.89□□□□□ -2.11
LMO4P61968 MTND5P35-201ENST00000557537 1720 ntBASIC1.88□□□□□ -2.11
LMO4P61968 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
LMO4P61968 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LMO4P61968 MIR411-201ENST00000362239 96 ntBASIC1.88□□□□□ -2.11
LMO4P61968 SNORA25.1-201ENST00000362326 128 ntBASIC1.88□□□□□ -2.11
LMO4P61968 RNA5SP393-201ENST00000363423 117 ntBASIC1.88□□□□□ -2.11
LMO4P61968 Y_RNA.199-201ENST00000364014 102 ntBASIC1.88□□□□□ -2.11
LMO4P61968 Y_RNA.230-201ENST00000364348 109 ntBASIC1.88□□□□□ -2.11
LMO4P61968 MIR186-201ENST00000384988 86 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms