Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MRPS10P1-201ENST00000448483 130 ntBASIC-0.02□□□□□ -2.41
AP3S2P59780 ZNF114P1-201ENST00000453500 292 ntBASIC-0.02□□□□□ -2.41
AP3S2P59780 AC091021.1-201ENST00000468051 388 ntBASIC-0.02□□□□□ -2.41
AP3S2P59780 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.02□□□□□ -2.41
AP3S2P59780 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
AP3S2P59780 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.02□□□□□ -2.41
AP3S2P59780 RN7SKP164-201ENST00000516138 266 ntBASIC-0.02□□□□□ -2.41
AP3S2P59780 MTND1P5-201ENST00000517906 940 ntBASIC-0.02□□□□□ -2.41
AP3S2P59780 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.02□□□□□ -2.41
AP3S2P59780 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.02□□□□□ -2.41
AP3S2P59780 AK6P2-201ENST00000549020 471 ntBASIC-0.02□□□□□ -2.41
AP3S2P59780 MIR5583-1-201ENST00000580941 59 ntBASIC-0.02□□□□□ -2.41
AP3S2P59780 MIR4514-201ENST00000581410 57 ntBASIC-0.02□□□□□ -2.41
AP3S2P59780 RAC1P9-201ENST00000604990 392 ntBASIC-0.02□□□□□ -2.41
AP3S2P59780 AL158050.2-201ENST00000605336 568 ntBASIC-0.02□□□□□ -2.41
AP3S2P59780 AC092634.7-201ENST00000621022 103 ntBASIC-0.02□□□□□ -2.41
AP3S2P59780 SNORD114-23-201ENST00000363536 72 ntBASIC-0.03□□□□□ -2.41
AP3S2P59780 RNU6-654P-201ENST00000364373 107 ntBASIC-0.03□□□□□ -2.41
AP3S2P59780 CALM2P3-201ENST00000400429 449 ntBASIC-0.03□□□□□ -2.41
AP3S2P59780 AL008987.1-201ENST00000415528 237 ntBASIC-0.03□□□□□ -2.41
AP3S2P59780 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.03□□□□□ -2.41
AP3S2P59780 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.03□□□□□ -2.41
AP3S2P59780 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.03□□□□□ -2.41
AP3S2P59780 RNU7-167P-201ENST00000459160 62 ntBASIC-0.03□□□□□ -2.41
AP3S2P59780 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.03□□□□□ -2.41
AP3S2P59780 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.03□□□□□ -2.41
AP3S2P59780 AC091133.4-201ENST00000511142 308 ntBASIC-0.03□□□□□ -2.41
AP3S2P59780 RNU7-28P-201ENST00000516759 62 ntBASIC-0.03□□□□□ -2.41
AP3S2P59780 AC023442.1-201ENST00000531247 422 ntBASIC-0.03□□□□□ -2.41
AP3S2P59780 AC016957.1-201ENST00000534895 309 ntBASIC-0.03□□□□□ -2.41
AP3S2P59780 HIF1AP1-201ENST00000553642 175 ntBASIC-0.03□□□□□ -2.41
AP3S2P59780 AP000240.1-201ENST00000609910 452 ntBASIC-0.03□□□□□ -2.41
AP3S2P59780 MIR1-1-201ENST00000362147 71 ntBASIC-0.04□□□□□ -2.42
AP3S2P59780 MIR18A-201ENST00000362310 71 ntBASIC-0.04□□□□□ -2.42
AP3S2P59780 RNA5SP432-201ENST00000362480 116 ntBASIC-0.04□□□□□ -2.42
AP3S2P59780 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.04□□□□□ -2.42
AP3S2P59780 MIR891A-201ENST00000401237 79 ntBASIC-0.04□□□□□ -2.42
AP3S2P59780 RNA5SP95-201ENST00000410319 137 ntBASIC-0.04□□□□□ -2.42
AP3S2P59780 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.04□□□□□ -2.42
AP3S2P59780 SSR1P2-201ENST00000415208 787 ntBASIC-0.04□□□□□ -2.42
AP3S2P59780 ZNF885P-201ENST00000420174 1098 ntBASIC-0.04□□□□□ -2.42
AP3S2P59780 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.04□□□□□ -2.42
AP3S2P59780 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.04□□□□□ -2.42
AP3S2P59780 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.04□□□□□ -2.42
AP3S2P59780 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.04□□□□□ -2.42
AP3S2P59780 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.04□□□□□ -2.42
AP3S2P59780 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.04□□□□□ -2.42
AP3S2P59780 CYCTP-201ENST00000504253 315 ntBASIC-0.04□□□□□ -2.42
AP3S2P59780 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.04□□□□□ -2.42
AP3S2P59780 RNA5SP436-201ENST00000516020 115 ntBASIC-0.04□□□□□ -2.42
AP3S2P59780 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.04□□□□□ -2.42
AP3S2P59780 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.04□□□□□ -2.42
AP3S2P59780 AP001372.4-201ENST00000524889 472 ntBASIC-0.04□□□□□ -2.42
AP3S2P59780 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.04□□□□□ -2.42
AP3S2P59780 AC022523.2-201ENST00000561045 150 ntBASIC-0.04□□□□□ -2.42
AP3S2P59780 MIR4667-201ENST00000578933 66 ntBASIC-0.04□□□□□ -2.42
AP3S2P59780 OR5AK4P-201ENST00000635912 903 ntBASIC-0.04□□□□□ -2.42
AP3S2P59780 SNORD114-16-201ENST00000363044 70 ntBASIC-0.05□□□□□ -2.42
AP3S2P59780 RNU6-727P-201ENST00000363592 107 ntBASIC-0.05□□□□□ -2.42
AP3S2P59780 SNORA2B-201ENST00000384583 137 ntBASIC-0.05□□□□□ -2.42
AP3S2P59780 MIR122-201ENST00000385044 85 ntBASIC-0.05□□□□□ -2.42
AP3S2P59780 RNU1-139P-201ENST00000391307 165 ntBASIC-0.05□□□□□ -2.42
AP3S2P59780 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.05□□□□□ -2.42
AP3S2P59780 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.05□□□□□ -2.42
AP3S2P59780 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.05□□□□□ -2.42
AP3S2P59780 PIGPP3-201ENST00000425307 415 ntBASIC-0.05□□□□□ -2.42
AP3S2P59780 AC073261.1-201ENST00000429409 121 ntBASIC-0.05□□□□□ -2.42
AP3S2P59780 MTATP6P14-201ENST00000455189 673 ntBASIC-0.05□□□□□ -2.42
AP3S2P59780 SNORD65B-201ENST00000459126 73 ntBASIC-0.05□□□□□ -2.42
AP3S2P59780 AC005178.1-201ENST00000508392 440 ntBASIC-0.05□□□□□ -2.42
AP3S2P59780 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.05□□□□□ -2.42
AP3S2P59780 AC097462.1-201ENST00000514125 324 ntBASIC-0.05□□□□□ -2.42
AP3S2P59780 AC074133.1-201ENST00000515696 183 ntBASIC-0.05□□□□□ -2.42
AP3S2P59780 SNORA25.12-201ENST00000516202 82 ntBASIC-0.05□□□□□ -2.42
AP3S2P59780 SNORA62.5-201ENST00000516634 120 ntBASIC-0.05□□□□□ -2.42
AP3S2P59780 MTND1P35-201ENST00000526739 508 ntBASIC-0.05□□□□□ -2.42
AP3S2P59780 MTND4P33-201ENST00000556706 766 ntBASIC-0.05□□□□□ -2.42
AP3S2P59780 MIR3124-201ENST00000582636 67 ntBASIC-0.05□□□□□ -2.42
AP3S2P59780 MIR98-201ENST00000606724 119 ntBASIC-0.05□□□□□ -2.42
AP3S2P59780 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.05□□□□□ -2.42
AP3S2P59780 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.05□□□□□ -2.42
AP3S2P59780 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
AP3S2P59780 RNU4-67P-201ENST00000364569 141 ntBASIC-0.06□□□□□ -2.42
AP3S2P59780 SNORD113.3-201ENST00000364630 78 ntBASIC-0.06□□□□□ -2.42
AP3S2P59780 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.06□□□□□ -2.42
AP3S2P59780 RNU6-815P-201ENST00000384080 113 ntBASIC-0.06□□□□□ -2.42
AP3S2P59780 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.06□□□□□ -2.42
AP3S2P59780 MIR520C-201ENST00000385005 87 ntBASIC-0.06□□□□□ -2.42
AP3S2P59780 RNA5SP482-201ENST00000391269 118 ntBASIC-0.06□□□□□ -2.42
AP3S2P59780 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.06□□□□□ -2.42
AP3S2P59780 AL009048.1-201ENST00000450437 298 ntBASIC-0.06□□□□□ -2.42
AP3S2P59780 RNU7-138P-201ENST00000459479 64 ntBASIC-0.06□□□□□ -2.42
AP3S2P59780 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.06□□□□□ -2.42
AP3S2P59780 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.06□□□□□ -2.42
AP3S2P59780 RNU6-430P-201ENST00000517078 107 ntBASIC-0.06□□□□□ -2.42
AP3S2P59780 RNU7-172P-201ENST00000517125 64 ntBASIC-0.06□□□□□ -2.42
AP3S2P59780 AC104576.1-201ENST00000524225 88 ntBASIC-0.06□□□□□ -2.42
AP3S2P59780 FGF7P1-201ENST00000582820 288 ntBASIC-0.06□□□□□ -2.42
AP3S2P59780 MIR548AB-201ENST00000584917 84 ntBASIC-0.06□□□□□ -2.42
AP3S2P59780 AC064836.2-201ENST00000609491 462 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms