Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 MIR5696-201ENST00000578474 85 ntBASIC1.56□□□□□ -2.16
RIPPLY3P57055 AL355802.3-201ENST00000607571 545 ntBASIC1.56□□□□□ -2.16
RIPPLY3P57055 RMST_6.1-201ENST00000611980 203 ntBASIC1.56□□□□□ -2.16
RIPPLY3P57055 AC133104.2-201ENST00000615272 193 ntBASIC1.56□□□□□ -2.16
RIPPLY3P57055 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.56□□□□□ -2.16
RIPPLY3P57055 AC084781.2-201ENST00000615568 161 ntBASIC1.56□□□□□ -2.16
RIPPLY3P57055 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.56□□□□□ -2.16
RIPPLY3P57055 AC130454.1-201ENST00000622948 401 ntBASIC1.56□□□□□ -2.16
RIPPLY3P57055 AL008636.1-201ENST00000625038 1018 ntBASIC1.56□□□□□ -2.16
RIPPLY3P57055 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.55□□□□□ -2.16
RIPPLY3P57055 RNU6-545P-201ENST00000362681 104 ntBASIC1.55□□□□□ -2.16
RIPPLY3P57055 Y_RNA.58-201ENST00000362807 102 ntBASIC1.55□□□□□ -2.16
RIPPLY3P57055 Y_RNA.154-201ENST00000363624 102 ntBASIC1.55□□□□□ -2.16
RIPPLY3P57055 RNU6-1188P-201ENST00000363795 107 ntBASIC1.55□□□□□ -2.16
RIPPLY3P57055 Y_RNA.263-201ENST00000364659 114 ntBASIC1.55□□□□□ -2.16
RIPPLY3P57055 RNU6-867P-201ENST00000364956 107 ntBASIC1.55□□□□□ -2.16
RIPPLY3P57055 RNY3P1-201ENST00000365085 102 ntBASIC1.55□□□□□ -2.16
RIPPLY3P57055 RNY3-201ENST00000365484 102 ntBASIC1.55□□□□□ -2.16
RIPPLY3P57055 Y_RNA.474-201ENST00000384341 102 ntBASIC1.55□□□□□ -2.16
RIPPLY3P57055 Y_RNA.490-201ENST00000384413 102 ntBASIC1.55□□□□□ -2.16
RIPPLY3P57055 RNU6-310P-201ENST00000384655 107 ntBASIC1.55□□□□□ -2.16
RIPPLY3P57055 SNORA12.2-201ENST00000391040 156 ntBASIC1.55□□□□□ -2.16
RIPPLY3P57055 MIR1262-201ENST00000408276 93 ntBASIC1.55□□□□□ -2.16
RIPPLY3P57055 RNU2-48P-201ENST00000410694 191 ntBASIC1.55□□□□□ -2.16
RIPPLY3P57055 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.55□□□□□ -2.16
RIPPLY3P57055 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.55□□□□□ -2.16
RIPPLY3P57055 RNU6-120P-201ENST00000516077 103 ntBASIC1.55□□□□□ -2.16
RIPPLY3P57055 SNORA25.14-201ENST00000516481 132 ntBASIC1.55□□□□□ -2.16
RIPPLY3P57055 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.55□□□□□ -2.16
RIPPLY3P57055 AC093027.1-201ENST00000546698 429 ntBASIC1.55□□□□□ -2.16
RIPPLY3P57055 UBL5P4-201ENST00000562584 236 ntBASIC1.55□□□□□ -2.16
RIPPLY3P57055 MIR5695-201ENST00000579717 85 ntBASIC1.55□□□□□ -2.16
RIPPLY3P57055 MIR5002-201ENST00000584713 97 ntBASIC1.55□□□□□ -2.16
RIPPLY3P57055 AC100812.1-201ENST00000607622 580 ntBASIC1.55□□□□□ -2.16
RIPPLY3P57055 AC005014.2-201ENST00000607795 599 ntBASIC1.55□□□□□ -2.16
RIPPLY3P57055 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.55□□□□□ -2.16
RIPPLY3P57055 RNU6-222P-201ENST00000362438 107 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 Y_RNA.85-201ENST00000363014 111 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 Y_RNA.132-201ENST00000363421 102 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 RNU6-727P-201ENST00000363592 107 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 RNA5SP160-201ENST00000364866 120 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 RNU5E-4P-201ENST00000364931 120 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 SNORD14D-201ENST00000384390 87 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 AL033519.2-201ENST00000403958 392 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 AC007098.1-201ENST00000420122 367 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 MTCO2P27-201ENST00000420740 428 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 MTCO3P10-201ENST00000455912 772 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 Y_RNA.632-201ENST00000459189 102 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 RPS29P1-201ENST00000465274 159 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 AC022493.2-201ENST00000506122 481 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 AC097473.1-201ENST00000508142 408 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 RNU6-277P-201ENST00000516272 106 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 RNU6-1198P-201ENST00000516904 67 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 RNU6-58P-201ENST00000517143 103 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.54□□□□□ -2.16
RIPPLY3P57055 AC134698.4-201ENST00000523451 826 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 DEFB131C-201ENST00000528817 165 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 AC026470.2-201ENST00000561492 181 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.54□□□□□ -2.16
RIPPLY3P57055 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.54□□□□□ -2.16
RIPPLY3P57055 MIR8081-201ENST00000611533 95 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 MIR1244-1-201ENST00000612829 85 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.54□□□□□ -2.16
RIPPLY3P57055 TCL6_2.1-201ENST00000615162 119 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 MIR1244-3-201ENST00000635744 85 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 MIR1244-2-201ENST00000636449 85 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 MIR1244-4-202ENST00000636813 85 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 MIR6086-201ENST00000638065 55 ntBASIC1.54□□□□□ -2.16
RIPPLY3P57055 RNU4-73P-201ENST00000363164 141 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 Y_RNA.106-201ENST00000363189 100 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 Y_RNA.115-201ENST00000363272 98 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 RNU6-873P-201ENST00000363833 107 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 SNORD115-32-201ENST00000364079 82 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 RNU6-1305P-201ENST00000364353 104 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 RNU6-99P-201ENST00000364721 107 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 RNU6-890P-201ENST00000384121 107 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 RNU6-35P-201ENST00000384530 107 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 SUMO2P12-201ENST00000405924 140 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 RPS26P42-201ENST00000413485 326 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 AC139712.2-201ENST00000424302 339 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 MTCYBP10-201ENST00000424905 650 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 USP9YP16-201ENST00000430287 407 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 MTND3P23-201ENST00000431980 347 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.53□□□□□ -2.16
RIPPLY3P57055 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.53□□□□□ -2.16
RIPPLY3P57055 USP9YP23-201ENST00000455085 407 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 AP000870.1-201ENST00000472927 406 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.53□□□□□ -2.16
RIPPLY3P57055 RNA5SP54-201ENST00000516951 92 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 AC004584.2-201ENST00000570407 410 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 MIR4795-201ENST00000584182 89 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 MIR4753-201ENST00000585119 83 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 FAM106DP-201ENST00000586416 501 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
RIPPLY3P57055 AC103810.8-201ENST00000607347 118 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 MIR6078-201ENST00000611069 100 ntBASIC1.53□□□□□ -2.16
RIPPLY3P57055 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
RIPPLY3P57055 MTND5P16-201ENST00000460269 1703 ntBASIC1.52□□□□□ -2.17
RIPPLY3P57055 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RIPPLY3P57055 RNU1-93P-201ENST00000364704 169 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms