Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC008163.1-202ENST00000636004 2889 ntBASIC0.71□□□□□ -2.3
CLDN18P56856 Y_RNA.265-201ENST00000364677 108 ntBASIC0.71□□□□□ -2.3
CLDN18P56856 RNU6-790P-201ENST00000384479 105 ntBASIC0.71□□□□□ -2.3
CLDN18P56856 MIR608-201ENST00000384820 100 ntBASIC0.71□□□□□ -2.3
CLDN18P56856 MIR32-201ENST00000384965 70 ntBASIC0.71□□□□□ -2.3
CLDN18P56856 MIR1185-2-201ENST00000408687 86 ntBASIC0.71□□□□□ -2.3
CLDN18P56856 AC114482.1-201ENST00000418010 247 ntBASIC0.71□□□□□ -2.3
CLDN18P56856 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.71□□□□□ -2.3
CLDN18P56856 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.71□□□□□ -2.3
CLDN18P56856 RPS3AP17-201ENST00000472594 777 ntBASIC0.71□□□□□ -2.3
CLDN18P56856 RNU6-1223P-201ENST00000517124 104 ntBASIC0.71□□□□□ -2.3
CLDN18P56856 AC027419.1-201ENST00000522976 328 ntBASIC0.71□□□□□ -2.3
CLDN18P56856 AL590705.4-201ENST00000532209 134 ntBASIC0.71□□□□□ -2.3
CLDN18P56856 APOOP3-201ENST00000536787 586 ntBASIC0.71□□□□□ -2.3
CLDN18P56856 AC090049.2-201ENST00000550377 109 ntBASIC0.71□□□□□ -2.3
CLDN18P56856 AC013244.2-201ENST00000603396 103 ntBASIC0.71□□□□□ -2.3
CLDN18P56856 AC080078.2-201ENST00000603766 501 ntBASIC0.71□□□□□ -2.3
CLDN18P56856 AL357312.1-201ENST00000603879 298 ntBASIC0.71□□□□□ -2.3
CLDN18P56856 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.71□□□□□ -2.3
CLDN18P56856 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
CLDN18P56856 RNU6-727P-201ENST00000363592 107 ntBASIC0.7□□□□□ -2.3
CLDN18P56856 U3.8-201ENST00000363675 217 ntBASIC0.7□□□□□ -2.3
CLDN18P56856 RNU6-541P-201ENST00000384709 110 ntBASIC0.7□□□□□ -2.3
CLDN18P56856 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.7□□□□□ -2.3
CLDN18P56856 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.7□□□□□ -2.3
CLDN18P56856 RNA5SP504-201ENST00000410676 117 ntBASIC0.7□□□□□ -2.3
CLDN18P56856 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.7□□□□□ -2.3
CLDN18P56856 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.7□□□□□ -2.3
CLDN18P56856 MTCO2P16-201ENST00000436962 677 ntBASIC0.7□□□□□ -2.3
CLDN18P56856 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.7□□□□□ -2.3
CLDN18P56856 AC091133.4-201ENST00000511142 308 ntBASIC0.7□□□□□ -2.3
CLDN18P56856 AC016957.1-201ENST00000534895 309 ntBASIC0.7□□□□□ -2.3
CLDN18P56856 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.7□□□□□ -2.3
CLDN18P56856 AC073114.1-201ENST00000612027 490 ntBASIC0.7□□□□□ -2.3
CLDN18P56856 RMST_2.1-201ENST00000617263 136 ntBASIC0.7□□□□□ -2.3
CLDN18P56856 AC006504.8-201ENST00000621046 635 ntBASIC0.7□□□□□ -2.3
CLDN18P56856 Y_RNA.1-201ENST00000352915 104 ntBASIC0.69□□□□□ -2.3
CLDN18P56856 RNU6-348P-201ENST00000384386 107 ntBASIC0.69□□□□□ -2.3
CLDN18P56856 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
CLDN18P56856 AF228730.1-201ENST00000397972 663 ntBASIC0.69□□□□□ -2.3
CLDN18P56856 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.69□□□□□ -2.3
CLDN18P56856 RPS27P22-201ENST00000478056 241 ntBASIC0.69□□□□□ -2.3
CLDN18P56856 Y_RNA.654-201ENST00000497848 106 ntBASIC0.69□□□□□ -2.3
CLDN18P56856 RNU7-128P-201ENST00000517247 62 ntBASIC0.69□□□□□ -2.3
CLDN18P56856 AL118558.2-201ENST00000556294 238 ntBASIC0.69□□□□□ -2.3
CLDN18P56856 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.69□□□□□ -2.3
CLDN18P56856 CPDP1-201ENST00000579660 283 ntBASIC0.69□□□□□ -2.3
CLDN18P56856 MIR4653-201ENST00000585107 83 ntBASIC0.69□□□□□ -2.3
CLDN18P56856 MIR4438-201ENST00000585271 93 ntBASIC0.69□□□□□ -2.3
CLDN18P56856 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.69□□□□□ -2.3
CLDN18P56856 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.69□□□□□ -2.3
CLDN18P56856 Z69908.1-201ENST00000622603 247 ntBASIC0.69□□□□□ -2.3
CLDN18P56856 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.69□□□□□ -2.3
CLDN18P56856 Y_RNA.363-201ENST00000365529 113 ntBASIC0.68□□□□□ -2.3
CLDN18P56856 RNU6-38P-201ENST00000384085 107 ntBASIC0.68□□□□□ -2.3
CLDN18P56856 RNU6-1103P-201ENST00000384150 107 ntBASIC0.68□□□□□ -2.3
CLDN18P56856 MIR653-201ENST00000385279 96 ntBASIC0.68□□□□□ -2.3
CLDN18P56856 AL353193.1-201ENST00000421444 268 ntBASIC0.68□□□□□ -2.3
CLDN18P56856 MTCO2P19-201ENST00000427513 598 ntBASIC0.68□□□□□ -2.3
CLDN18P56856 AL445305.1-201ENST00000432577 575 ntBASIC0.68□□□□□ -2.3
CLDN18P56856 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.68□□□□□ -2.3
CLDN18P56856 TPT1P7-201ENST00000458300 517 ntBASIC0.68□□□□□ -2.3
CLDN18P56856 RNU6-58P-201ENST00000517143 103 ntBASIC0.68□□□□□ -2.3
CLDN18P56856 DEFB108E-201ENST00000524692 240 ntBASIC0.68□□□□□ -2.3
CLDN18P56856 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.68□□□□□ -2.3
CLDN18P56856 AC026371.1-201ENST00000551867 419 ntBASIC0.68□□□□□ -2.3
CLDN18P56856 FRG2DP-202ENST00000566967 323 ntBASIC0.68□□□□□ -2.3
CLDN18P56856 AC010620.1-201ENST00000601088 1102 ntBASIC0.68□□□□□ -2.3
CLDN18P56856 AC092807.2-201ENST00000609367 243 ntBASIC0.68□□□□□ -2.3
CLDN18P56856 Y_RNA.319-201ENST00000365138 92 ntBASIC0.67□□□□□ -2.3
CLDN18P56856 RNU4-12P-201ENST00000365233 139 ntBASIC0.67□□□□□ -2.3
CLDN18P56856 SNORA2.2-201ENST00000365473 135 ntBASIC0.67□□□□□ -2.3
CLDN18P56856 MIR100-201ENST00000385259 80 ntBASIC0.67□□□□□ -2.3
CLDN18P56856 SNORD41-201ENST00000386967 70 ntBASIC0.67□□□□□ -2.3
CLDN18P56856 EIF4E2P1-201ENST00000393781 255 ntBASIC0.67□□□□□ -2.3
CLDN18P56856 USP9YP29-201ENST00000445112 563 ntBASIC0.67□□□□□ -2.3
CLDN18P56856 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.67□□□□□ -2.3
CLDN18P56856 AC073534.2-201ENST00000620377 381 ntBASIC0.67□□□□□ -2.3
CLDN18P56856 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.67□□□□□ -2.3
CLDN18P56856 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
CLDN18P56856 HSBP1P2-201ENST00000299671 229 ntBASIC0.66□□□□□ -2.3
CLDN18P56856 RNU4-9P-201ENST00000364951 139 ntBASIC0.66□□□□□ -2.3
CLDN18P56856 Y_RNA.415-201ENST00000384012 112 ntBASIC0.66□□□□□ -2.3
CLDN18P56856 SNORA12.1-201ENST00000390873 148 ntBASIC0.66□□□□□ -2.3
CLDN18P56856 AC006461.1-201ENST00000412637 326 ntBASIC0.66□□□□□ -2.3
CLDN18P56856 NDUFB4P10-201ENST00000452541 359 ntBASIC0.66□□□□□ -2.3
CLDN18P56856 AC093850.1-201ENST00000454121 251 ntBASIC0.66□□□□□ -2.3
CLDN18P56856 RN7SKP298-201ENST00000515950 94 ntBASIC0.66□□□□□ -2.3
CLDN18P56856 RNU7-12P-201ENST00000516030 62 ntBASIC0.66□□□□□ -2.3
CLDN18P56856 SNORA40.12-201ENST00000516329 111 ntBASIC0.66□□□□□ -2.3
CLDN18P56856 Y_RNA.695-201ENST00000516715 107 ntBASIC0.66□□□□□ -2.3
CLDN18P56856 RNU2-56P-201ENST00000516826 190 ntBASIC0.66□□□□□ -2.3
CLDN18P56856 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.66□□□□□ -2.3
CLDN18P56856 AC023157.2-201ENST00000540596 141 ntBASIC0.66□□□□□ -2.3
CLDN18P56856 RPL21P9-201ENST00000556149 474 ntBASIC0.66□□□□□ -2.3
CLDN18P56856 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.66□□□□□ -2.3
CLDN18P56856 AC100830.2-201ENST00000581636 240 ntBASIC0.66□□□□□ -2.3
CLDN18P56856 AC087752.4-201ENST00000605911 462 ntBASIC0.66□□□□□ -2.3
CLDN18P56856 AC022709.1-201ENST00000615967 87 ntBASIC0.66□□□□□ -2.3
CLDN18P56856 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms