Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.94□□□□□ -1.94
GFRA1P56159 RNU6-255P-201ENST00000516957 105 ntBASIC2.94□□□□□ -1.94
GFRA1P56159 SNORA70.24-201ENST00000517233 118 ntBASIC2.94□□□□□ -1.94
GFRA1P56159 MIR5004-201ENST00000579078 107 ntBASIC2.94□□□□□ -1.94
GFRA1P56159 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.94□□□□□ -1.94
GFRA1P56159 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.94□□□□□ -1.94
GFRA1P56159 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
GFRA1P56159 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.94□□□□□ -1.94
GFRA1P56159 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.94□□□□□ -1.94
GFRA1P56159 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
GFRA1P56159 CENPCP1-201ENST00000533085 2578 ntBASIC2.94□□□□□ -1.94
GFRA1P56159 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
GFRA1P56159 AL356292.1-201ENST00000283110 373 ntBASIC2.93□□□□□ -1.94
GFRA1P56159 Y_RNA.182-201ENST00000363880 111 ntBASIC2.93□□□□□ -1.94
GFRA1P56159 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
GFRA1P56159 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
GFRA1P56159 MIR491-201ENST00000384877 84 ntBASIC2.93□□□□□ -1.94
GFRA1P56159 MIR592-201ENST00000384959 97 ntBASIC2.93□□□□□ -1.94
GFRA1P56159 MIR626-201ENST00000385032 94 ntBASIC2.93□□□□□ -1.94
GFRA1P56159 MIR526A2-201ENST00000390198 65 ntBASIC2.93□□□□□ -1.94
GFRA1P56159 MIR1253-201ENST00000408273 105 ntBASIC2.93□□□□□ -1.94
GFRA1P56159 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.93□□□□□ -1.94
GFRA1P56159 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.93□□□□□ -1.94
GFRA1P56159 TRIAP1P1-201ENST00000427062 225 ntBASIC2.93□□□□□ -1.94
GFRA1P56159 AL353705.1-201ENST00000433468 480 ntBASIC2.93□□□□□ -1.94
GFRA1P56159 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.93□□□□□ -1.94
GFRA1P56159 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.93□□□□□ -1.94
GFRA1P56159 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.93□□□□□ -1.94
GFRA1P56159 AC117454.1-201ENST00000491120 168 ntBASIC2.93□□□□□ -1.94
GFRA1P56159 RN7SL504P-201ENST00000494496 287 ntBASIC2.93□□□□□ -1.94
GFRA1P56159 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.93□□□□□ -1.94
GFRA1P56159 RNU6-856P-201ENST00000516959 98 ntBASIC2.93□□□□□ -1.94
GFRA1P56159 MIR5688-201ENST00000580619 83 ntBASIC2.93□□□□□ -1.94
GFRA1P56159 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.93□□□□□ -1.94
GFRA1P56159 AC005972.2-201ENST00000604690 348 ntBASIC2.93□□□□□ -1.94
GFRA1P56159 AC004832.4-201ENST00000608952 331 ntBASIC2.93□□□□□ -1.94
GFRA1P56159 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.93□□□□□ -1.94
GFRA1P56159 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.93□□□□□ -1.94
GFRA1P56159 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.93□□□□□ -1.94
GFRA1P56159 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.93□□□□□ -1.94
GFRA1P56159 MIR367-201ENST00000362299 68 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 RNU6-774P-201ENST00000363238 107 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 RNU6-103P-201ENST00000363686 107 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 RNU4-10P-201ENST00000364383 140 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 U8.7-201ENST00000364940 136 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 SNORA25B-201ENST00000365507 128 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 MIR23A-201ENST00000385245 73 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.92□□□□□ -1.94
GFRA1P56159 AL451074.5-201ENST00000415894 435 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.92□□□□□ -1.94
GFRA1P56159 AC025750.2-201ENST00000442609 450 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 RPS27AP9-201ENST00000477681 438 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.92□□□□□ -1.94
GFRA1P56159 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.92□□□□□ -1.94
GFRA1P56159 Y_RNA.797-201ENST00000515977 94 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 RNU7-115P-201ENST00000516433 55 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 Y_RNA.703-201ENST00000516846 111 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 RNU7-116P-201ENST00000516940 62 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 RN7SKP57-201ENST00000517248 293 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 AC093331.1-201ENST00000521474 169 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 MIR4724-201ENST00000579485 89 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 MIR2682-201ENST00000580305 110 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 MIR3200-201ENST00000580767 85 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 AC090616.3-201ENST00000582184 217 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 MIR8057-201ENST00000620957 69 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 MIR7153-201ENST00000637758 57 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.92□□□□□ -1.94
GFRA1P56159 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
GFRA1P56159 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
GFRA1P56159 AC093010.3-201ENST00000570269 15214 ntBASIC2.92□□□□□ -1.94
GFRA1P56159 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
GFRA1P56159 Y_RNA.75-201ENST00000362927 97 ntBASIC2.91□□□□□ -1.94
GFRA1P56159 RNU4-13P-201ENST00000364019 141 ntBASIC2.91□□□□□ -1.94
GFRA1P56159 RNU6-312P-201ENST00000364629 107 ntBASIC2.91□□□□□ -1.94
GFRA1P56159 RNU6-1323P-201ENST00000384025 107 ntBASIC2.91□□□□□ -1.94
GFRA1P56159 MIR181A2-201ENST00000384863 110 ntBASIC2.91□□□□□ -1.94
GFRA1P56159 SRIP3-201ENST00000413200 219 ntBASIC2.91□□□□□ -1.94
GFRA1P56159 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.91□□□□□ -1.94
GFRA1P56159 AC009238.1-201ENST00000442165 424 ntBASIC2.91□□□□□ -1.94
GFRA1P56159 Z96811.1-201ENST00000445880 108 ntBASIC2.91□□□□□ -1.94
GFRA1P56159 AC009237.6-201ENST00000446969 424 ntBASIC2.91□□□□□ -1.94
GFRA1P56159 AC115115.1-201ENST00000449927 248 ntBASIC2.91□□□□□ -1.94
GFRA1P56159 AC018868.1-201ENST00000491307 315 ntBASIC2.91□□□□□ -1.94
GFRA1P56159 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.91□□□□□ -1.94
GFRA1P56159 RNU6-1146P-201ENST00000516282 102 ntBASIC2.91□□□□□ -1.94
GFRA1P56159 NDUFB9P3-201ENST00000521269 501 ntBASIC2.91□□□□□ -1.94
GFRA1P56159 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.91□□□□□ -1.94
GFRA1P56159 AP003357.1-201ENST00000604497 148 ntBASIC2.91□□□□□ -1.94
GFRA1P56159 U4atac.1-201ENST00000618345 95 ntBASIC2.91□□□□□ -1.94
GFRA1P56159 AC021753.1-201ENST00000635724 168 ntBASIC2.91□□□□□ -1.94
GFRA1P56159 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
GFRA1P56159 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.91□□□□□ -1.94
GFRA1P56159 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
GFRA1P56159 PWAR6-201ENST00000552334 4618 ntBASIC2.9□□□□□ -1.94
GFRA1P56159 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
GFRA1P56159 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
GFRA1P56159 Y_RNA.24-201ENST00000362508 103 ntBASIC2.9□□□□□ -1.95
GFRA1P56159 RNU6-969P-201ENST00000383900 105 ntBASIC2.9□□□□□ -1.95
GFRA1P56159 Y_RNA.412-201ENST00000384001 104 ntBASIC2.9□□□□□ -1.95
GFRA1P56159 SNORA36B-201ENST00000410438 131 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms