Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.8□□□□□ -2.12
CDH13P55290 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.8□□□□□ -2.12
CDH13P55290 AC069257.2-201ENST00000441819 155 ntBASIC1.8□□□□□ -2.12
CDH13P55290 AC112492.4-201ENST00000456549 352 ntBASIC1.8□□□□□ -2.12
CDH13P55290 Y_RNA.632-201ENST00000459189 102 ntBASIC1.8□□□□□ -2.12
CDH13P55290 AC144568.1-201ENST00000520139 137 ntBASIC1.8□□□□□ -2.12
CDH13P55290 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.8□□□□□ -2.12
CDH13P55290 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CDH13P55290 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.8□□□□□ -2.12
CDH13P55290 AC006001.4-201ENST00000622243 395 ntBASIC1.8□□□□□ -2.12
CDH13P55290 RNU6-879P-201ENST00000364328 108 ntBASIC1.79□□□□□ -2.12
CDH13P55290 Y_RNA.356-201ENST00000365475 113 ntBASIC1.79□□□□□ -2.12
CDH13P55290 SNORA69.1-201ENST00000390904 137 ntBASIC1.79□□□□□ -2.12
CDH13P55290 MIR1253-201ENST00000408273 105 ntBASIC1.79□□□□□ -2.12
CDH13P55290 SNORA11.2-201ENST00000408318 127 ntBASIC1.79□□□□□ -2.12
CDH13P55290 RNU6-1304P-201ENST00000411374 106 ntBASIC1.79□□□□□ -2.12
CDH13P55290 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.79□□□□□ -2.12
CDH13P55290 AC236972.2-201ENST00000434979 310 ntBASIC1.79□□□□□ -2.12
CDH13P55290 HMGN2P34-201ENST00000437647 269 ntBASIC1.79□□□□□ -2.12
CDH13P55290 AC099799.1-201ENST00000439809 192 ntBASIC1.79□□□□□ -2.12
CDH13P55290 AC003989.2-201ENST00000440224 169 ntBASIC1.79□□□□□ -2.12
CDH13P55290 AC007677.1-201ENST00000445757 515 ntBASIC1.79□□□□□ -2.12
CDH13P55290 U8.22-201ENST00000459141 133 ntBASIC1.79□□□□□ -2.12
CDH13P55290 SNORD19B-201ENST00000459623 84 ntBASIC1.79□□□□□ -2.12
CDH13P55290 RPL23AP42-201ENST00000471152 471 ntBASIC1.79□□□□□ -2.12
CDH13P55290 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.79□□□□□ -2.12
CDH13P55290 RN7SL429P-201ENST00000479090 223 ntBASIC1.79□□□□□ -2.12
CDH13P55290 RN7SL489P-201ENST00000486185 223 ntBASIC1.79□□□□□ -2.12
CDH13P55290 AC010409.1-201ENST00000487382 476 ntBASIC1.79□□□□□ -2.12
CDH13P55290 RN7SL327P-201ENST00000488659 223 ntBASIC1.79□□□□□ -2.12
CDH13P55290 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.79□□□□□ -2.12
CDH13P55290 AC022868.1-201ENST00000517767 391 ntBASIC1.79□□□□□ -2.12
CDH13P55290 MIR4419B-201ENST00000577260 68 ntBASIC1.79□□□□□ -2.12
CDH13P55290 RN7SL853P-201ENST00000617250 223 ntBASIC1.79□□□□□ -2.12
CDH13P55290 AC087588.2-201ENST00000617667 426 ntBASIC1.79□□□□□ -2.12
CDH13P55290 AL008636.1-201ENST00000625038 1018 ntBASIC1.79□□□□□ -2.12
CDH13P55290 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CDH13P55290 AC073544.1-201ENST00000600110 1595 ntBASIC1.79□□□□□ -2.12
CDH13P55290 MTND5P10-201ENST00000603719 1809 ntBASIC1.79□□□□□ -2.12
CDH13P55290 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
CDH13P55290 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.79□□□□□ -2.12
CDH13P55290 AC010615.1-201ENST00000594254 1764 ntBASIC1.78□□□□□ -2.12
CDH13P55290 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CDH13P55290 Y_RNA.187-201ENST00000363918 113 ntBASIC1.78□□□□□ -2.12
CDH13P55290 RNU6-1040P-201ENST00000383974 107 ntBASIC1.78□□□□□ -2.12
CDH13P55290 RNU6-296P-201ENST00000384608 107 ntBASIC1.78□□□□□ -2.12
CDH13P55290 MIR520A-201ENST00000384862 85 ntBASIC1.78□□□□□ -2.12
CDH13P55290 AL079342.1-201ENST00000401460 267 ntBASIC1.78□□□□□ -2.12
CDH13P55290 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.78□□□□□ -2.12
CDH13P55290 MTND4P28-201ENST00000426217 387 ntBASIC1.78□□□□□ -2.12
CDH13P55290 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.78□□□□□ -2.12
CDH13P55290 AC245047.4-201ENST00000433189 144 ntBASIC1.78□□□□□ -2.12
CDH13P55290 PCNPP5-201ENST00000452246 481 ntBASIC1.78□□□□□ -2.12
CDH13P55290 RPS29P21-201ENST00000496272 170 ntBASIC1.78□□□□□ -2.12
CDH13P55290 MTND3P22-201ENST00000510932 243 ntBASIC1.78□□□□□ -2.12
CDH13P55290 RNU6-120P-201ENST00000516077 103 ntBASIC1.78□□□□□ -2.12
CDH13P55290 AC024995.1-201ENST00000523014 93 ntBASIC1.78□□□□□ -2.12
CDH13P55290 MIR3684-201ENST00000579779 74 ntBASIC1.78□□□□□ -2.12
CDH13P55290 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.78□□□□□ -2.12
CDH13P55290 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.78□□□□□ -2.12
CDH13P55290 AC245060.5-201ENST00000610778 3293 ntBASIC1.78□□□□□ -2.12
CDH13P55290 MIR410-201ENST00000362222 80 ntBASIC1.77□□□□□ -2.13
CDH13P55290 RNU6-1266P-201ENST00000362794 105 ntBASIC1.77□□□□□ -2.13
CDH13P55290 Y_RNA.287-201ENST00000364853 94 ntBASIC1.77□□□□□ -2.13
CDH13P55290 RNU6-1264P-201ENST00000383891 107 ntBASIC1.77□□□□□ -2.13
CDH13P55290 RNU6-318P-201ENST00000384283 103 ntBASIC1.77□□□□□ -2.13
CDH13P55290 MIR559-201ENST00000385188 96 ntBASIC1.77□□□□□ -2.13
CDH13P55290 MIR676-201ENST00000390702 67 ntBASIC1.77□□□□□ -2.13
CDH13P55290 Y_RNA.592-201ENST00000410274 109 ntBASIC1.77□□□□□ -2.13
CDH13P55290 EBAG9P1-201ENST00000418955 543 ntBASIC1.77□□□□□ -2.13
CDH13P55290 UQCRBP2-201ENST00000447827 297 ntBASIC1.77□□□□□ -2.13
CDH13P55290 RNU1-41P-201ENST00000516161 162 ntBASIC1.77□□□□□ -2.13
CDH13P55290 RNU1-48P-201ENST00000516400 162 ntBASIC1.77□□□□□ -2.13
CDH13P55290 AC084364.2-201ENST00000546924 395 ntBASIC1.77□□□□□ -2.13
CDH13P55290 MIR3945-201ENST00000581853 98 ntBASIC1.77□□□□□ -2.13
CDH13P55290 AC022432.1-201ENST00000595739 310 ntBASIC1.77□□□□□ -2.13
CDH13P55290 AC103810.8-201ENST00000607347 118 ntBASIC1.77□□□□□ -2.13
CDH13P55290 AC084781.2-201ENST00000615568 161 ntBASIC1.77□□□□□ -2.13
CDH13P55290 AC092881.1-201ENST00000638218 2733 ntBASIC1.77□□□□□ -2.13
CDH13P55290 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
CDH13P55290 RNU6-661P-201ENST00000362409 107 ntBASIC1.76□□□□□ -2.13
CDH13P55290 RNA5SP361-201ENST00000362686 118 ntBASIC1.76□□□□□ -2.13
CDH13P55290 RNU6-1301P-201ENST00000362724 104 ntBASIC1.76□□□□□ -2.13
CDH13P55290 SNORA63D-201ENST00000364359 132 ntBASIC1.76□□□□□ -2.13
CDH13P55290 ELOCP21-201ENST00000412558 336 ntBASIC1.76□□□□□ -2.13
CDH13P55290 AL445685.2-201ENST00000422551 342 ntBASIC1.76□□□□□ -2.13
CDH13P55290 OOSP1P1-201ENST00000423265 274 ntBASIC1.76□□□□□ -2.13
CDH13P55290 RPS29P11-201ENST00000496507 171 ntBASIC1.76□□□□□ -2.13
CDH13P55290 RNU6-911P-201ENST00000516523 104 ntBASIC1.76□□□□□ -2.13
CDH13P55290 SNORA31.17-201ENST00000516953 127 ntBASIC1.76□□□□□ -2.13
CDH13P55290 GNAI2P1-201ENST00000541815 315 ntBASIC1.76□□□□□ -2.13
CDH13P55290 AC006435.5-201ENST00000624486 112 ntBASIC1.76□□□□□ -2.13
CDH13P55290 AC112487.2-201ENST00000637950 304 ntBASIC1.76□□□□□ -2.13
CDH13P55290 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.76□□□□□ -2.13
CDH13P55290 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CDH13P55290 Y_RNA.67-201ENST00000362870 100 ntBASIC1.75□□□□□ -2.13
CDH13P55290 Y_RNA.146-201ENST00000363549 102 ntBASIC1.75□□□□□ -2.13
CDH13P55290 RNU6-417P-201ENST00000384712 107 ntBASIC1.75□□□□□ -2.13
CDH13P55290 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.75□□□□□ -2.13
CDH13P55290 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms